RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 RIOK3O14730 519 aaKnown RBP21.58■■□□□ 1.05
RETREG1-201ENST00000306320 KCNQ3O43525 872 aa21.58■■□□□ 1.05
RETREG1-201ENST00000306320 CNPY2Q9Y2B0 182 aa21.58■■□□□ 1.05
RETREG1-201ENST00000306320 ERICH4A6NGS2 130 aa21.58■■□□□ 1.04
RETREG1-201ENST00000306320 HMGN5P82970 282 aaKnown RBP21.58■■□□□ 1.04
RETREG1-201ENST00000306320 THEMISQ8N1K5 641 aaPredicted RBP21.58■■□□□ 1.04
RETREG1-201ENST00000306320 C16orf45Q96MC5 204 aaPredicted RBP21.57■■□□□ 1.04
RETREG1-201ENST00000306320 LGR6Q9HBX8 967 aa21.57■■□□□ 1.04
RETREG1-201ENST00000306320 PSME1Q06323 249 aa21.57■■□□□ 1.04
RETREG1-201ENST00000306320 ERC2O15083 957 aa21.56■■□□□ 1.04
RETREG1-201ENST00000306320 CYP2E1P05181 493 aaPredicted RBP21.56■■□□□ 1.04
RETREG1-201ENST00000306320 NAA30Q147X3 362 aaPredicted RBP21.56■■□□□ 1.04
RETREG1-201ENST00000306320 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.56■■□□□ 1.04
RETREG1-201ENST00000306320 PALD1Q9ULE6 856 aa21.56■■□□□ 1.04
RETREG1-201ENST00000306320 V9GYY5 206 aaPredicted RBP21.56■■□□□ 1.04
RETREG1-201ENST00000306320 IL17REQ8NFR9 667 aa21.56■■□□□ 1.04
RETREG1-201ENST00000306320 CHMP4BQ9H444 224 aaKnown RBP21.56■■□□□ 1.04
RETREG1-201ENST00000306320 HOXC9P31274 260 aa21.55■■□□□ 1.04
RETREG1-201ENST00000306320 MPRIPQ6WCQ1 1025 aa21.55■■□□□ 1.04
RETREG1-201ENST00000306320 DCTPP1Q9H773 170 aa21.55■■□□□ 1.04
RETREG1-201ENST00000306320 PNMA6EA0A0J9YXQ4 647 aa21.55■■□□□ 1.04
RETREG1-201ENST00000306320 PYCARDQ9ULZ3 195 aa21.55■■□□□ 1.04
RETREG1-201ENST00000306320 AGLP35573 1532 aa21.55■■□□□ 1.04
RETREG1-201ENST00000306320 PIBF1Q8WXW3 757 aa21.54■■□□□ 1.04
RETREG1-201ENST00000306320 PHF14O94880 888 aa21.54■■□□□ 1.04
RETREG1-201ENST00000306320 CAMK4Q16566 473 aa21.54■■□□□ 1.04
RETREG1-201ENST00000306320 ANKRD44Q8N8A2 993 aa21.54■■□□□ 1.04
RETREG1-201ENST00000306320 DDX17Q92841 729 aaKnown RBP21.54■■□□□ 1.04
RETREG1-201ENST00000306320 CDC42BPGQ6DT37 1551 aa21.53■■□□□ 1.04
RETREG1-201ENST00000306320 FLIIQ13045 1269 aa21.53■■□□□ 1.04
RETREG1-201ENST00000306320 ORAI2Q96SN7 254 aa21.53■■□□□ 1.04
RETREG1-201ENST00000306320 GNAT3A8MTJ3 354 aa21.53■■□□□ 1.04
RETREG1-201ENST00000306320 LRRFIP2Q9Y608 721 aaKnown RBP21.53■■□□□ 1.04
RETREG1-201ENST00000306320 RIMS1Q86UR5 1692 aaKnown RBP21.52■■□□□ 1.04
RETREG1-201ENST00000306320 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.52■■□□□ 1.04
RETREG1-201ENST00000306320 PTCH1Q13635 1447 aa21.52■■□□□ 1.04
RETREG1-201ENST00000306320 CLEC17AQ6ZS10 378 aa21.52■■□□□ 1.04
RETREG1-201ENST00000306320 NUTM1Q86Y26 1132 aa21.51■■□□□ 1.03
RETREG1-201ENST00000306320 MCCP23508 829 aa21.51■■□□□ 1.03
RETREG1-201ENST00000306320 PRIMPOLQ96LW4 560 aa21.51■■□□□ 1.03
RETREG1-201ENST00000306320 ANKRD26Q9UPS8 1709 aa21.51■■□□□ 1.03
RETREG1-201ENST00000306320 HDGFL1Q5TGJ6 251 aa21.51■■□□□ 1.03
RETREG1-201ENST00000306320 NBPF6Q5VWK0 638 aa21.51■■□□□ 1.03
RETREG1-201ENST00000306320 NBPF4Q96M43 638 aa21.51■■□□□ 1.03
RETREG1-201ENST00000306320 PIK3R4Q99570 1358 aa21.5■■□□□ 1.03
RETREG1-201ENST00000306320 VPS37CA5D8V6 355 aaPredicted RBP21.5■■□□□ 1.03
RETREG1-201ENST00000306320 RTL1A6NKG5 1358 aa21.5■■□□□ 1.03
RETREG1-201ENST00000306320 BRPF1P55201 1214 aaPredicted RBP21.5■■□□□ 1.03
RETREG1-201ENST00000306320 PDE4CQ08493 712 aa21.5■■□□□ 1.03
RETREG1-201ENST00000306320 PHF8Q9UPP1 1060 aa21.49■■□□□ 1.03
RETREG1-201ENST00000306320 TBX22Q9Y458 520 aa21.49■■□□□ 1.03
RETREG1-201ENST00000306320 PLEKHG1Q9ULL1 1385 aa21.49■■□□□ 1.03
RETREG1-201ENST00000306320 DLG5Q8TDM6 1919 aa21.49■■□□□ 1.03
RETREG1-201ENST00000306320 FLT4P35916 1363 aa21.49■■□□□ 1.03
RETREG1-201ENST00000306320 CPA1P15085 419 aa21.49■■□□□ 1.03
RETREG1-201ENST00000306320 ZC3H6P61129 1189 aaKnown RBP21.49■■□□□ 1.03
RETREG1-201ENST00000306320 PRAMEF22A3QJZ6 481 aa21.48■■□□□ 1.03
RETREG1-201ENST00000306320 SIRT1Q96EB6 747 aa21.48■■□□□ 1.03
RETREG1-201ENST00000306320 OVOS2A0A0J9YW53 1432 aa21.48■■□□□ 1.03
RETREG1-201ENST00000306320 OVOS2Q6IE36 1432 aa21.48■■□□□ 1.03
RETREG1-201ENST00000306320 FBXW7Q969H0 707 aa21.48■■□□□ 1.03
RETREG1-201ENST00000306320 PTGS1P23219 599 aa21.47■■□□□ 1.03
RETREG1-201ENST00000306320 PIP4K2AP48426 406 aaPredicted RBP21.47■■□□□ 1.03
RETREG1-201ENST00000306320 AIMP1Q12904 312 aaKnown RBP21.47■■□□□ 1.03
RETREG1-201ENST00000306320 SETD1AO15047 1707 aaKnown RBP21.47■■□□□ 1.03
RETREG1-201ENST00000306320 FERMT3Q86UX7 667 aa21.47■■□□□ 1.03
RETREG1-201ENST00000306320 DIAPH3Q9NSV4 1193 aa21.47■■□□□ 1.03
RETREG1-201ENST00000306320 CEP170BQ9Y4F5 1589 aaPredicted RBP21.47■■□□□ 1.03
RETREG1-201ENST00000306320 GNAI2P04899 355 aa21.46■■□□□ 1.03
RETREG1-201ENST00000306320 LRMPQ12912 555 aa21.46■■□□□ 1.03
RETREG1-201ENST00000306320 CKAP2LQ8IYA6 745 aa21.46■■□□□ 1.03
RETREG1-201ENST00000306320 ZBTB9Q96C00 473 aa21.46■■□□□ 1.03
RETREG1-201ENST00000306320 BRD1O95696 1058 aa21.46■■□□□ 1.03
RETREG1-201ENST00000306320 RPAP2Q8IXW5 612 aaPredicted RBP21.46■■□□□ 1.03
RETREG1-201ENST00000306320 SRCIN1Q9C0H9 1055 aa21.46■■□□□ 1.03
RETREG1-201ENST00000306320 CRB1P82279 1406 aa21.45■■□□□ 1.02
RETREG1-201ENST00000306320 KCNJ4P48050 445 aa21.44■■□□□ 1.02
RETREG1-201ENST00000306320 UTP14CQ5TAP6 766 aaKnown RBP21.44■■□□□ 1.02
RETREG1-201ENST00000306320 CCDC30Q5VVM6 783 aa21.44■■□□□ 1.02
RETREG1-201ENST00000306320 GTPBP4Q9BZE4 634 aaKnown RBP21.44■■□□□ 1.02
RETREG1-201ENST00000306320 CHPF2Q9P2E5 772 aa21.44■■□□□ 1.02
RETREG1-201ENST00000306320 SBNO1A3KN83 1393 aa21.44■■□□□ 1.02
RETREG1-201ENST00000306320 CCDC183Q5T5S1 534 aa21.44■■□□□ 1.02
RETREG1-201ENST00000306320 UNC5CLQ8IV45 518 aa21.44■■□□□ 1.02
RETREG1-201ENST00000306320 RGS12O14924 1447 aa21.43■■□□□ 1.02
RETREG1-201ENST00000306320 SURF6O75683 361 aaKnown RBP21.43■■□□□ 1.02
RETREG1-201ENST00000306320 TAF7Q15545 349 aaPredicted RBP21.43■■□□□ 1.02
RETREG1-201ENST00000306320 FAM173BQ6P4H8 233 aa21.43■■□□□ 1.02
RETREG1-201ENST00000306320 ZNF530Q6P9A1 599 aaPredicted RBP21.43■■□□□ 1.02
RETREG1-201ENST00000306320 TECPR2O15040 1411 aa21.43■■□□□ 1.02
RETREG1-201ENST00000306320 LETM1O95202 739 aaPredicted RBP21.42■■□□□ 1.02
RETREG1-201ENST00000306320 HMMRO75330 724 aa21.42■■□□□ 1.02
RETREG1-201ENST00000306320 CHMP4AQ9BY43 222 aa21.42■■□□□ 1.02
RETREG1-201ENST00000306320 KDM4AO75164 1064 aa21.42■■□□□ 1.02
RETREG1-201ENST00000306320 PDE1AP54750 535 aa21.42■■□□□ 1.02
RETREG1-201ENST00000306320 TEFQ10587 303 aa21.42■■□□□ 1.02
RETREG1-201ENST00000306320 TAOK2Q9UL54 1235 aa21.42■■□□□ 1.02
RETREG1-201ENST00000306320 IGSF1Q8N6C5 1336 aa21.41■■□□□ 1.02
RETREG1-201ENST00000306320 GTF2E1P29083 439 aaPredicted RBP21.41■■□□□ 1.02
RETREG1-201ENST00000306320 PEAK1Q9H792 1746 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms