RNA–Protein interactions for RNA: ENST00000306006.10

ZNF239-201, Transcript of zinc finger protein 239, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF239, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF239-201ENST00000306006 DDX54Q8TDD1 881 aaKnown RBP11.82□□□□□ -0.52
ZNF239-201ENST00000306006 SHANK3Q9BYB0 1731 aa11.82□□□□□ -0.52
ZNF239-201ENST00000306006 PNMA6EA0A0J9YXQ4 647 aa11.82□□□□□ -0.52
ZNF239-201ENST00000306006 NKX1-1Q15270 411 aaPredicted RBP11.82□□□□□ -0.52
ZNF239-201ENST00000306006 KSR2Q6VAB6 950 aa11.82□□□□□ -0.52
ZNF239-201ENST00000306006 C16orf71Q8IYS4 520 aaPredicted RBP11.82□□□□□ -0.52
ZNF239-201ENST00000306006 MAP3K2Q9Y2U5 619 aa11.82□□□□□ -0.52
ZNF239-201ENST00000306006 USP16Q9Y5T5 823 aa11.82□□□□□ -0.52
ZNF239-201ENST00000306006 COL22A1Q8NFW1 1626 aaPredicted RBP11.82□□□□□ -0.52
ZNF239-201ENST00000306006 APBB1O00213 710 aa11.81□□□□□ -0.52
ZNF239-201ENST00000306006 SMARCA5O60264 1052 aaPredicted RBP11.81□□□□□ -0.52
ZNF239-201ENST00000306006 SNRPA1P09661 255 aaKnown RBP11.81□□□□□ -0.52
ZNF239-201ENST00000306006 BMP2KLQ5H9B9 411 aa11.81□□□□□ -0.52
ZNF239-201ENST00000306006 PLEKHM2Q8IWE5 1019 aa11.81□□□□□ -0.52
ZNF239-201ENST00000306006 FMNL2Q96PY5 1086 aa11.81□□□□□ -0.52
ZNF239-201ENST00000306006 ERVV-2B6SEH9 535 aa11.81□□□□□ -0.52
ZNF239-201ENST00000306006 NBPF7P0C2Y1 421 aaPredicted RBP11.81□□□□□ -0.52
ZNF239-201ENST00000306006 DDRGK1Q96HY6 314 aa11.81□□□□□ -0.52
ZNF239-201ENST00000306006 COL14A1Q05707 1796 aaKnown RBP11.8□□□□□ -0.52
ZNF239-201ENST00000306006 AIMP1Q12904 312 aaKnown RBP11.8□□□□□ -0.52
ZNF239-201ENST00000306006 COL16A1Q07092 1604 aaPredicted RBP11.8□□□□□ -0.52
ZNF239-201ENST00000306006 GLI3P10071 1580 aa11.79□□□□□ -0.52
ZNF239-201ENST00000306006 MYL6BP14649 208 aa11.79□□□□□ -0.52
ZNF239-201ENST00000306006 OTUD7AQ8TE49 926 aaPredicted RBP11.79□□□□□ -0.52
ZNF239-201ENST00000306006 EXOC6BQ9Y2D4 811 aa11.79□□□□□ -0.52
ZNF239-201ENST00000306006 DDX58O95786 925 aaKnown RBP11.78□□□□□ -0.52
ZNF239-201ENST00000306006 LRP10Q7Z4F1 713 aa11.78□□□□□ -0.52
ZNF239-201ENST00000306006 UPF2Q9HAU5 1272 aaKnown RBP11.78□□□□□ -0.52
ZNF239-201ENST00000306006 ALDH1L1O75891 902 aa11.78□□□□□ -0.52
ZNF239-201ENST00000306006 PIP4K2AP48426 406 aaPredicted RBP11.78□□□□□ -0.52
ZNF239-201ENST00000306006 CWF19L2Q2TBE0 894 aaKnown RBP11.78□□□□□ -0.52
ZNF239-201ENST00000306006 XAGE3Q8WTP9 111 aa11.78□□□□□ -0.52
ZNF239-201ENST00000306006 PHLPP1O60346 1717 aa11.78□□□□□ -0.52
ZNF239-201ENST00000306006 GSPT1P15170 499 aaKnown RBP11.77□□□□□ -0.52
ZNF239-201ENST00000306006 COPS6Q7L5N1 327 aa11.77□□□□□ -0.52
ZNF239-201ENST00000306006 SSH3Q8TE77 659 aa11.77□□□□□ -0.52
ZNF239-201ENST00000306006 TBC1D32Q96NH3 1257 aa11.77□□□□□ -0.52
ZNF239-201ENST00000306006 ANP32EQ9BTT0 268 aa11.77□□□□□ -0.52
ZNF239-201ENST00000306006 MFAP1P55081 439 aaKnown RBP11.77□□□□□ -0.53
ZNF239-201ENST00000306006 PPP1R42Q7Z4L9 355 aa11.77□□□□□ -0.53
ZNF239-201ENST00000306006 LINS1Q8NG48 757 aa11.77□□□□□ -0.53
ZNF239-201ENST00000306006 DISP2A7MBM2 1401 aa11.76□□□□□ -0.53
ZNF239-201ENST00000306006 IBTKQ9P2D0 1353 aaPredicted RBP11.76□□□□□ -0.53
ZNF239-201ENST00000306006 POLA2Q14181 598 aa11.76□□□□□ -0.53
ZNF239-201ENST00000306006 TTC22Q5TAA0 569 aa11.76□□□□□ -0.53
ZNF239-201ENST00000306006 RIC3Q7Z5B4 369 aa11.76□□□□□ -0.53
ZNF239-201ENST00000306006 UBR2Q8IWV8 1755 aa11.76□□□□□ -0.53
ZNF239-201ENST00000306006 TOGARAM1Q9Y4F4 1720 aa11.76□□□□□ -0.53
ZNF239-201ENST00000306006 KCPQ6ZWJ8 1503 aa11.76□□□□□ -0.53
ZNF239-201ENST00000306006 SLC4A3P48751 1232 aa11.76□□□□□ -0.53
ZNF239-201ENST00000306006 PIP4K2BP78356 416 aa11.76□□□□□ -0.53
ZNF239-201ENST00000306006 C9orf78Q9NZ63 289 aaPredicted RBP11.76□□□□□ -0.53
ZNF239-201ENST00000306006 PAPPAQ13219 1627 aa11.76□□□□□ -0.53
ZNF239-201ENST00000306006 LAMB4A4D0S4 1761 aa11.75□□□□□ -0.53
ZNF239-201ENST00000306006 ADAMTS2O95450 1211 aa11.75□□□□□ -0.53
ZNF239-201ENST00000306006 IGKV5-2P06315 115 aa11.75□□□□□ -0.53
ZNF239-201ENST00000306006 LRRCC1Q9C099 1032 aa11.75□□□□□ -0.53
ZNF239-201ENST00000306006 SRGAP3O43295 1099 aa11.75□□□□□ -0.53
ZNF239-201ENST00000306006 PTCD1O75127 700 aaKnown RBP11.75□□□□□ -0.53
ZNF239-201ENST00000306006 TOM1O60784 492 aa11.74□□□□□ -0.53
ZNF239-201ENST00000306006 TBC1D9Q6ZT07 1266 aa11.74□□□□□ -0.53
ZNF239-201ENST00000306006 ANKRD13DQ6ZTN6 518 aa11.74□□□□□ -0.53
ZNF239-201ENST00000306006 C22orf23Q9BZE7 217 aa11.74□□□□□ -0.53
ZNF239-201ENST00000306006 TMOD3Q9NYL9 352 aa11.74□□□□□ -0.53
ZNF239-201ENST00000306006 TNS2Q63HR2 1409 aa11.74□□□□□ -0.53
ZNF239-201ENST00000306006 PLCH1Q4KWH8 1693 aa11.74□□□□□ -0.53
ZNF239-201ENST00000306006 NBPF26B4DH59 902 aa11.74□□□□□ -0.53
ZNF239-201ENST00000306006 GRM8O00222 908 aa11.74□□□□□ -0.53
ZNF239-201ENST00000306006 NBPF14Q5TI25 921 aa11.74□□□□□ -0.53
ZNF239-201ENST00000306006 NBPF10Q6P3W6 841 aaKnown RBP11.74□□□□□ -0.53
ZNF239-201ENST00000306006 NBPF15Q8N660 670 aa11.74□□□□□ -0.53
ZNF239-201ENST00000306006 METTL22Q9BUU2 404 aaPredicted RBP11.74□□□□□ -0.53
ZNF239-201ENST00000306006 UTYO14607 1347 aa11.73□□□□□ -0.53
ZNF239-201ENST00000306006 SURF6O75683 361 aaKnown RBP11.73□□□□□ -0.53
ZNF239-201ENST00000306006 PDE1AP54750 535 aa11.73□□□□□ -0.53
ZNF239-201ENST00000306006 MYD88Q99836 296 aa11.73□□□□□ -0.53
ZNF239-201ENST00000306006 OSBPL3Q9H4L5 887 aa11.73□□□□□ -0.53
ZNF239-201ENST00000306006 SALL3Q9BXA9 1300 aa11.73□□□□□ -0.53
ZNF239-201ENST00000306006 NUTM2BA6NNL0 878 aaPredicted RBP11.72□□□□□ -0.53
ZNF239-201ENST00000306006 NEURL1BA8MQ27 555 aa11.72□□□□□ -0.53
ZNF239-201ENST00000306006 NUTM2EB1AL46 878 aaPredicted RBP11.72□□□□□ -0.53
ZNF239-201ENST00000306006 CDC45O75419 566 aa11.72□□□□□ -0.53
ZNF239-201ENST00000306006 NEXNQ0ZGT2 675 aa11.72□□□□□ -0.53
ZNF239-201ENST00000306006 MTX1Q13505 466 aa11.72□□□□□ -0.53
ZNF239-201ENST00000306006 NUTM2AQ8IVF1 878 aaPredicted RBP11.72□□□□□ -0.53
ZNF239-201ENST00000306006 PIGBQ92521 554 aa11.72□□□□□ -0.53
ZNF239-201ENST00000306006 ERBB4Q15303 1308 aa11.72□□□□□ -0.53
ZNF239-201ENST00000306006 A1BGP04217 495 aa11.72□□□□□ -0.53
ZNF239-201ENST00000306006 SDSP20132 328 aa11.72□□□□□ -0.53
ZNF239-201ENST00000306006 KAZALD1Q96I82 304 aa11.72□□□□□ -0.53
ZNF239-201ENST00000306006 SUCLG2Q96I99 432 aa11.72□□□□□ -0.53
ZNF239-201ENST00000306006 EXOC5O00471 708 aa11.71□□□□□ -0.53
ZNF239-201ENST00000306006 RAB11FIP3O75154 756 aa11.71□□□□□ -0.53
ZNF239-201ENST00000306006 GCKRQ14397 625 aa11.71□□□□□ -0.53
ZNF239-201ENST00000306006 DAXXQ9UER7 740 aaPredicted RBP11.71□□□□□ -0.53
ZNF239-201ENST00000306006 ASAP1Q9ULH1 1129 aa11.71□□□□□ -0.53
ZNF239-201ENST00000306006 NRAPQ86VF7 1730 aa11.71□□□□□ -0.53
ZNF239-201ENST00000306006 TSHZ3Q63HK5 1081 aa11.71□□□□□ -0.54
ZNF239-201ENST00000306006 IL1RAPL2Q9NP60 686 aa11.71□□□□□ -0.54
ZNF239-201ENST00000306006 HDAC5Q9UQL6 1122 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms