RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 CCDC12Q8WUD4 166 aaPredicted RBP14.35□□□□□ -0.11
ABCA3-201ENST00000301732 PPP6R1Q9UPN7 881 aa14.35□□□□□ -0.11
ABCA3-201ENST00000301732 CEP135Q66GS9 1140 aa14.35□□□□□ -0.11
ABCA3-201ENST00000301732 GAS2L2Q8NHY3 880 aa14.35□□□□□ -0.11
ABCA3-201ENST00000301732 PLEKHO1Q53GL0 409 aaPredicted RBP14.34□□□□□ -0.11
ABCA3-201ENST00000301732 RAB11FIP3O75154 756 aa14.34□□□□□ -0.11
ABCA3-201ENST00000301732 PUF60Q9UHX1 559 aaKnown RBP14.34□□□□□ -0.11
ABCA3-201ENST00000301732 VGLL3A8MV65 326 aa14.34□□□□□ -0.11
ABCA3-201ENST00000301732 LARP1Q6PKG0 1096 aaKnown RBP14.34□□□□□ -0.11
ABCA3-201ENST00000301732 GNL3LQ9NVN8 582 aaKnown RBP14.34□□□□□ -0.11
ABCA3-201ENST00000301732 CCT4P50991 539 aaKnown RBP14.34□□□□□ -0.11
ABCA3-201ENST00000301732 SNW1Q13573 536 aaKnown RBP14.34□□□□□ -0.11
ABCA3-201ENST00000301732 TTC12Q9H892 705 aaPredicted RBP14.34□□□□□ -0.11
ABCA3-201ENST00000301732 GNG11P61952 73 aa14.34□□□□□ -0.11
ABCA3-201ENST00000301732 HGSO14964 777 aaPredicted RBP14.33□□□□□ -0.11
ABCA3-201ENST00000301732 GTF2A1P52655 376 aaPredicted RBP14.33□□□□□ -0.11
ABCA3-201ENST00000301732 CCDC91Q7Z6B0 441 aa14.33□□□□□ -0.11
ABCA3-201ENST00000301732 C8orf76Q96K31 380 aa14.33□□□□□ -0.11
ABCA3-201ENST00000301732 WDR70Q9NW82 654 aa14.33□□□□□ -0.11
ABCA3-201ENST00000301732 IMMTQ16891 758 aaKnown RBP14.33□□□□□ -0.12
ABCA3-201ENST00000301732 MROH2BQ7Z745 1585 aa14.33□□□□□ -0.12
ABCA3-201ENST00000301732 METTL24Q5JXM2 366 aa14.33□□□□□ -0.12
ABCA3-201ENST00000301732 CAPZA3Q96KX2 299 aa14.33□□□□□ -0.12
ABCA3-201ENST00000301732 MYD88Q99836 296 aa14.33□□□□□ -0.12
ABCA3-201ENST00000301732 MX1P20591 662 aa14.32□□□□□ -0.12
ABCA3-201ENST00000301732 GJC1P36383 396 aa14.32□□□□□ -0.12
ABCA3-201ENST00000301732 IDEP14735 1019 aa14.32□□□□□ -0.12
ABCA3-201ENST00000301732 WWC3Q9ULE0 1092 aa14.32□□□□□ -0.12
ABCA3-201ENST00000301732 CCDC175P0C221 793 aa14.32□□□□□ -0.12
ABCA3-201ENST00000301732 ARID5AQ03989 594 aa14.32□□□□□ -0.12
ABCA3-201ENST00000301732 ANO10Q9NW15 660 aa14.32□□□□□ -0.12
ABCA3-201ENST00000301732 CTNNA2P26232 953 aa14.32□□□□□ -0.12
ABCA3-201ENST00000301732 AFMP43652 599 aa14.32□□□□□ -0.12
ABCA3-201ENST00000301732 FLIIQ13045 1269 aa14.32□□□□□ -0.12
ABCA3-201ENST00000301732 ZSCAN23Q3MJ62 389 aa14.32□□□□□ -0.12
ABCA3-201ENST00000301732 CEP57Q86XR8 500 aa14.32□□□□□ -0.12
ABCA3-201ENST00000301732 CEP126Q9P2H0 1117 aa14.32□□□□□ -0.12
ABCA3-201ENST00000301732 COMMD10Q9Y6G5 202 aa14.32□□□□□ -0.12
ABCA3-201ENST00000301732 ZSCAN12O43309 604 aa14.32□□□□□ -0.12
ABCA3-201ENST00000301732 MTIF2P46199 727 aaKnown RBP14.31□□□□□ -0.12
ABCA3-201ENST00000301732 CALCOCO1Q9P1Z2 691 aa14.31□□□□□ -0.12
ABCA3-201ENST00000301732 CNPY2Q9Y2B0 182 aa14.31□□□□□ -0.12
ABCA3-201ENST00000301732 AFAP1Q8N556 730 aa14.31□□□□□ -0.12
ABCA3-201ENST00000301732 GOLGA8BA8MQT2 603 aa14.31□□□□□ -0.12
ABCA3-201ENST00000301732 FBLN1P23142 703 aa14.31□□□□□ -0.12
ABCA3-201ENST00000301732 MICALL1Q8N3F8 863 aa14.31□□□□□ -0.12
ABCA3-201ENST00000301732 TMEM110-MUSTN1A8MSY1 372 aa14.3□□□□□ -0.12
ABCA3-201ENST00000301732 DNAAF4Q8WXU2 420 aa14.3□□□□□ -0.12
ABCA3-201ENST00000301732 IGHDP01880 384 aa14.3□□□□□ -0.12
ABCA3-201ENST00000301732 TATP17735 454 aaPredicted RBP14.3□□□□□ -0.12
ABCA3-201ENST00000301732 SSH1Q8WYL5 1049 aa14.3□□□□□ -0.12
ABCA3-201ENST00000301732 MKNK2Q9HBH9 465 aa14.3□□□□□ -0.12
ABCA3-201ENST00000301732 HYPKQ9NX55 129 aa14.3□□□□□ -0.12
ABCA3-201ENST00000301732 CDKL5O76039 1030 aa14.3□□□□□ -0.12
ABCA3-201ENST00000301732 PRDM2Q13029 1718 aa14.29□□□□□ -0.12
ABCA3-201ENST00000301732 DNAI1Q9UI46 699 aa14.29□□□□□ -0.12
ABCA3-201ENST00000301732 ANXA1P04083 346 aa14.29□□□□□ -0.12
ABCA3-201ENST00000301732 MICU3Q86XE3 530 aa14.29□□□□□ -0.12
ABCA3-201ENST00000301732 C10orf67Q8IYJ2 551 aa14.29□□□□□ -0.12
ABCA3-201ENST00000301732 ZSCAN31Q96LW9 406 aaPredicted RBP14.29□□□□□ -0.12
ABCA3-201ENST00000301732 PAFAH1B1P43034 410 aa14.29□□□□□ -0.12
ABCA3-201ENST00000301732 KARSQ15046 597 aaKnown RBP14.29□□□□□ -0.12
ABCA3-201ENST00000301732 PIP4K2BP78356 416 aa14.28□□□□□ -0.12
ABCA3-201ENST00000301732 AKNAD1Q5T1N1 836 aa14.28□□□□□ -0.12
ABCA3-201ENST00000301732 GPTP24298 496 aa14.28□□□□□ -0.12
ABCA3-201ENST00000301732 ATRIPQ8WXE1 791 aa14.28□□□□□ -0.12
ABCA3-201ENST00000301732 WIZO95785 1651 aa14.28□□□□□ -0.12
ABCA3-201ENST00000301732 NLRP5P59047 1200 aa14.28□□□□□ -0.12
ABCA3-201ENST00000301732 DUSP27Q5VZP5 1158 aa14.28□□□□□ -0.12
ABCA3-201ENST00000301732 PRC1O43663 620 aa14.28□□□□□ -0.12
ABCA3-201ENST00000301732 ARL1P40616 181 aaPredicted RBP14.28□□□□□ -0.12
ABCA3-201ENST00000301732 MAP9Q49MG5 647 aa14.28□□□□□ -0.12
ABCA3-201ENST00000301732 BAG4O95429 457 aaKnown RBP14.28□□□□□ -0.12
ABCA3-201ENST00000301732 GTF3C6Q969F1 213 aa14.28□□□□□ -0.12
ABCA3-201ENST00000301732 ZNF165P49910 485 aa14.27□□□□□ -0.12
ABCA3-201ENST00000301732 MXRA7P84157 204 aa14.27□□□□□ -0.12
ABCA3-201ENST00000301732 TAF7Q15545 349 aaPredicted RBP14.27□□□□□ -0.12
ABCA3-201ENST00000301732 ZEB2O60315 1214 aa14.27□□□□□ -0.12
ABCA3-201ENST00000301732 IFIT1P09914 478 aaKnown RBP14.27□□□□□ -0.12
ABCA3-201ENST00000301732 ANO6Q4KMQ2 910 aa14.27□□□□□ -0.12
ABCA3-201ENST00000301732 TBC1D9Q6ZT07 1266 aa14.27□□□□□ -0.12
ABCA3-201ENST00000301732 HOMER2Q9NSB8 354 aa14.27□□□□□ -0.12
ABCA3-201ENST00000301732 SEC63Q9UGP8 760 aaKnown RBP14.27□□□□□ -0.12
ABCA3-201ENST00000301732 CHST3Q7LGC8 479 aa14.27□□□□□ -0.13
ABCA3-201ENST00000301732 MARCKSP29966 332 aaPredicted RBP14.27□□□□□ -0.13
ABCA3-201ENST00000301732 CCDC186Q7Z3E2 898 aa14.27□□□□□ -0.13
ABCA3-201ENST00000301732 KSR1Q8IVT5 923 aa14.27□□□□□ -0.13
ABCA3-201ENST00000301732 NAPBQ9H115 298 aa14.27□□□□□ -0.13
ABCA3-201ENST00000301732 RHOXF2BP0C7M4 288 aa14.26□□□□□ -0.13
ABCA3-201ENST00000301732 RHOXF2Q9BQY4 288 aa14.26□□□□□ -0.13
ABCA3-201ENST00000301732 MIA2Q96PC5 1412 aa14.26□□□□□ -0.13
ABCA3-201ENST00000301732 DPH6Q7L8W6 267 aa14.26□□□□□ -0.13
ABCA3-201ENST00000301732 IFIT3O14879 490 aaKnown RBP14.26□□□□□ -0.13
ABCA3-201ENST00000301732 HOOK3Q86VS8 718 aa14.26□□□□□ -0.13
ABCA3-201ENST00000301732 GBP3Q9H0R5 595 aa14.26□□□□□ -0.13
ABCA3-201ENST00000301732 SLC12A7Q9Y666 1083 aa14.26□□□□□ -0.13
ABCA3-201ENST00000301732 TMPOP42166 694 aaKnown RBP14.26□□□□□ -0.13
ABCA3-201ENST00000301732 C17orf53Q8N3J3 647 aaPredicted RBP14.26□□□□□ -0.13
ABCA3-201ENST00000301732 FBF1Q8TES7 1133 aa14.26□□□□□ -0.13
ABCA3-201ENST00000301732 GOLIM4O00461 696 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms