RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 TNS3Q68CZ2 1445 aa17.96■□□□□ 0.47
SMG8-201ENST00000300917 TTC5Q8N0Z6 440 aa17.96■□□□□ 0.47
SMG8-201ENST00000300917 KIF2CQ99661 725 aa17.96■□□□□ 0.47
SMG8-201ENST00000300917 TRPM3Q9HCF6 1732 aaPredicted RBP17.96■□□□□ 0.47
SMG8-201ENST00000300917 RBM25P49756 843 aaKnown RBP17.96■□□□□ 0.47
SMG8-201ENST00000300917 RIC3Q7Z5B4 369 aa17.96■□□□□ 0.47
SMG8-201ENST00000300917 MX1P20591 662 aa17.96■□□□□ 0.46
SMG8-201ENST00000300917 SOS1Q07889 1333 aaPredicted RBP17.95■□□□□ 0.46
SMG8-201ENST00000300917 CABP4P57796 275 aa17.95■□□□□ 0.46
SMG8-201ENST00000300917 UNC5CLQ8IV45 518 aa17.94■□□□□ 0.46
SMG8-201ENST00000300917 ANTXR1Q9H6X2 564 aa17.94■□□□□ 0.46
SMG8-201ENST00000300917 PTCD1O75127 700 aaKnown RBP17.94■□□□□ 0.46
SMG8-201ENST00000300917 COPS6Q7L5N1 327 aa17.94■□□□□ 0.46
SMG8-201ENST00000300917 XAGE3Q8WTP9 111 aa17.94■□□□□ 0.46
SMG8-201ENST00000300917 ARXQ96QS3 562 aa17.94■□□□□ 0.46
SMG8-201ENST00000300917 FAM208AQ9UK61 1670 aaKnown RBP17.94■□□□□ 0.46
SMG8-201ENST00000300917 KDM6AO15550 1401 aaPredicted RBP17.94■□□□□ 0.46
SMG8-201ENST00000300917 HOXB7P09629 217 aa17.94■□□□□ 0.46
SMG8-201ENST00000300917 EVA1CP58658 441 aa17.94■□□□□ 0.46
SMG8-201ENST00000300917 ZNF330Q9Y3S2 320 aaPredicted RBP17.93■□□□□ 0.46
SMG8-201ENST00000300917 KSR2Q6VAB6 950 aa17.93■□□□□ 0.46
SMG8-201ENST00000300917 SIL1Q9H173 461 aa17.93■□□□□ 0.46
SMG8-201ENST00000300917 CASC1Q6TDU7 716 aa17.92■□□□□ 0.46
SMG8-201ENST00000300917 KLHDC4Q8TBB5 520 aa17.92■□□□□ 0.46
SMG8-201ENST00000300917 LARP1Q6PKG0 1096 aaKnown RBP17.92■□□□□ 0.46
SMG8-201ENST00000300917 IBTKQ9P2D0 1353 aaPredicted RBP17.91■□□□□ 0.46
SMG8-201ENST00000300917 ATP5J2-PTCD1G3V325 749 aa17.91■□□□□ 0.46
SMG8-201ENST00000300917 SSH3Q8TE77 659 aa17.91■□□□□ 0.46
SMG8-201ENST00000300917 MYD88Q99836 296 aa17.91■□□□□ 0.46
SMG8-201ENST00000300917 PDIA6Q15084 440 aa17.91■□□□□ 0.46
SMG8-201ENST00000300917 RHPN1Q8TCX5 695 aa17.91■□□□□ 0.46
SMG8-201ENST00000300917 DDX21Q9NR30 783 aaKnown RBP eCLIP17.91■□□□□ 0.46
SMG8-201ENST00000300917 NOL8Q76FK4 1167 aaKnown RBP17.9■□□□□ 0.46
SMG8-201ENST00000300917 HYPKQ9NX55 129 aa17.9■□□□□ 0.46
SMG8-201ENST00000300917 KIF1AQ12756 1690 aa17.9■□□□□ 0.46
SMG8-201ENST00000300917 DCAF5Q96JK2 942 aa17.9■□□□□ 0.46
SMG8-201ENST00000300917 USP26Q9BXU7 913 aa17.9■□□□□ 0.46
SMG8-201ENST00000300917 A0A0G2JS52 829 aa17.89■□□□□ 0.45
SMG8-201ENST00000300917 SUCLG2Q96I99 432 aa17.89■□□□□ 0.45
SMG8-201ENST00000300917 ANO2Q9NQ90 1003 aa17.89■□□□□ 0.45
SMG8-201ENST00000300917 ALS2Q96Q42 1657 aa17.88■□□□□ 0.45
SMG8-201ENST00000300917 DDX58O95786 925 aaKnown RBP17.88■□□□□ 0.45
SMG8-201ENST00000300917 ZCRB1Q8TBF4 217 aaKnown RBP17.88■□□□□ 0.45
SMG8-201ENST00000300917 DCCP43146 1447 aa17.88■□□□□ 0.45
SMG8-201ENST00000300917 NCAPD2Q15021 1401 aa17.88■□□□□ 0.45
SMG8-201ENST00000300917 BICC1Q9H694 974 aaKnown RBP17.87■□□□□ 0.45
SMG8-201ENST00000300917 IGKV5-2P06315 115 aa17.87■□□□□ 0.45
SMG8-201ENST00000300917 CHMP4AQ9BY43 222 aa17.87■□□□□ 0.45
SMG8-201ENST00000300917 GZF1Q9H116 711 aaPredicted RBP17.87■□□□□ 0.45
SMG8-201ENST00000300917 CCDC9Q9Y3X0 531 aaKnown RBP17.87■□□□□ 0.45
SMG8-201ENST00000300917 ERC2O15083 957 aa17.87■□□□□ 0.45
SMG8-201ENST00000300917 GRM8O00222 908 aa17.86■□□□□ 0.45
SMG8-201ENST00000300917 SNRPA1P09661 255 aaKnown RBP17.86■□□□□ 0.45
SMG8-201ENST00000300917 LMTK3Q96Q04 1460 aa17.86■□□□□ 0.45
SMG8-201ENST00000300917 FMNL2Q96PY5 1086 aa17.86■□□□□ 0.45
SMG8-201ENST00000300917 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.86■□□□□ 0.45
SMG8-201ENST00000300917 LMO7Q8WWI1 1683 aa17.86■□□□□ 0.45
SMG8-201ENST00000300917 POLA2Q14181 598 aa17.85■□□□□ 0.45
SMG8-201ENST00000300917 IL25Q9H293 177 aa17.85■□□□□ 0.45
SMG8-201ENST00000300917 NEXNQ0ZGT2 675 aa17.85■□□□□ 0.45
SMG8-201ENST00000300917 LINS1Q8NG48 757 aa17.85■□□□□ 0.45
SMG8-201ENST00000300917 CHMP5Q9NZZ3 219 aa17.85■□□□□ 0.45
SMG8-201ENST00000300917 WDR17Q8IZU2 1322 aa17.85■□□□□ 0.45
SMG8-201ENST00000300917 SALL3Q9BXA9 1300 aa17.85■□□□□ 0.45
SMG8-201ENST00000300917 GSE1Q14687 1217 aa17.85■□□□□ 0.45
SMG8-201ENST00000300917 ANKRD13DQ6ZTN6 518 aa17.85■□□□□ 0.45
SMG8-201ENST00000300917 KIF1BPQ96EK5 621 aa17.85■□□□□ 0.45
SMG8-201ENST00000300917 A1BGP04217 495 aa17.84■□□□□ 0.45
SMG8-201ENST00000300917 PHRF1Q9P1Y6 1649 aaKnown RBP17.84■□□□□ 0.45
SMG8-201ENST00000300917 HEG1Q9ULI3 1381 aa17.84■□□□□ 0.45
SMG8-201ENST00000300917 K7ELQ4 463 aaPredicted RBP17.84■□□□□ 0.45
SMG8-201ENST00000300917 EPHA10Q5JZY3 1008 aa17.84■□□□□ 0.45
SMG8-201ENST00000300917 KAZALD1Q96I82 304 aa17.84■□□□□ 0.45
SMG8-201ENST00000300917 OSBPL3Q9H4L5 887 aa17.84■□□□□ 0.45
SMG8-201ENST00000300917 KDM3BQ7LBC6 1761 aa17.84■□□□□ 0.45
SMG8-201ENST00000300917 REC8O95072 547 aa17.83■□□□□ 0.45
SMG8-201ENST00000300917 CCDC8Q9H0W5 538 aaPredicted RBP17.83■□□□□ 0.45
SMG8-201ENST00000300917 SOS2Q07890 1332 aaPredicted RBP17.83■□□□□ 0.45
SMG8-201ENST00000300917 UBE3BQ7Z3V4 1068 aa17.83■□□□□ 0.44
SMG8-201ENST00000300917 BTG4Q9NY30 223 aa17.83■□□□□ 0.44
SMG8-201ENST00000300917 CHMP3Q9Y3E7 222 aa17.83■□□□□ 0.44
SMG8-201ENST00000300917 KAT6BQ8WYB5 2073 aa17.83■□□□□ 0.44
SMG8-201ENST00000300917 CHMLP26374 656 aa17.83■□□□□ 0.44
SMG8-201ENST00000300917 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.83■□□□□ 0.441e-6■■□□□ 14.2
SMG8-201ENST00000300917 ALDH1L1O75891 902 aa17.82■□□□□ 0.44
SMG8-201ENST00000300917 IL2RBP14784 551 aa17.82■□□□□ 0.44
SMG8-201ENST00000300917 ESYT1Q9BSJ8 1104 aa17.82■□□□□ 0.44
SMG8-201ENST00000300917 CAMTA1Q9Y6Y1 1673 aa17.82■□□□□ 0.44
SMG8-201ENST00000300917 SNX21Q969T3 373 aa17.82■□□□□ 0.44
SMG8-201ENST00000300917 ZBTB3Q9H5J0 574 aa17.82■□□□□ 0.44
SMG8-201ENST00000300917 PALD1Q9ULE6 856 aa17.82■□□□□ 0.44
SMG8-201ENST00000300917 NEURL1BA8MQ27 555 aa17.82■□□□□ 0.44
SMG8-201ENST00000300917 AACSQ86V21 672 aa17.82■□□□□ 0.44
SMG8-201ENST00000300917 PXDNLA1KZ92 1463 aa17.81■□□□□ 0.44
SMG8-201ENST00000300917 RAB11FIP3O75154 756 aa17.81■□□□□ 0.44
SMG8-201ENST00000300917 TTLL7Q6ZT98 887 aa17.81■□□□□ 0.44
SMG8-201ENST00000300917 CLASRPQ8N2M8 674 aaKnown RBP17.81■□□□□ 0.44
SMG8-201ENST00000300917 SYTL4Q96C24 671 aaPredicted RBP17.81■□□□□ 0.44
SMG8-201ENST00000300917 IFIT2P09913 472 aaKnown RBP17.8■□□□□ 0.44
SMG8-201ENST00000300917 CWC27Q6UX04 472 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms