RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 NEO1Q92859 1461 aa20.88■□□□□ 0.93
CDC42EP3-201ENST00000295324 TTLL12Q14166 644 aaPredicted RBP20.88■□□□□ 0.93
CDC42EP3-201ENST00000295324 ASXL1Q8IXJ9 1541 aa20.88■□□□□ 0.93
CDC42EP3-201ENST00000295324 K7ELQ4 463 aaPredicted RBP20.88■□□□□ 0.93
CDC42EP3-201ENST00000295324 SMARCA5O60264 1052 aaPredicted RBP20.88■□□□□ 0.93
CDC42EP3-201ENST00000295324 ZNF444Q8N0Y2 327 aaPredicted RBP20.88■□□□□ 0.93
CDC42EP3-201ENST00000295324 CDCA7Q9BWT1 371 aaPredicted RBP20.88■□□□□ 0.93
CDC42EP3-201ENST00000295324 RNF41Q9H4P4 317 aaPredicted RBP20.88■□□□□ 0.93
CDC42EP3-201ENST00000295324 HSP90AA2PQ14568 343 aaPredicted RBP20.88■□□□□ 0.93
CDC42EP3-201ENST00000295324 MAGEC2Q9UBF1 373 aaPredicted RBP20.88■□□□□ 0.93
CDC42EP3-201ENST00000295324 ABCC1P33527 1531 aa20.87■□□□□ 0.93
CDC42EP3-201ENST00000295324 NAP1L1P55209 391 aaKnown RBP20.87■□□□□ 0.93
CDC42EP3-201ENST00000295324 KRT85P78386 507 aa20.87■□□□□ 0.93
CDC42EP3-201ENST00000295324 SPTY2D1Q68D10 685 aaPredicted RBP20.87■□□□□ 0.93
CDC42EP3-201ENST00000295324 ATP7AQ04656 1500 aa20.87■□□□□ 0.93
CDC42EP3-201ENST00000295324 FILIP1LQ4L180 1135 aa20.87■□□□□ 0.93
CDC42EP3-201ENST00000295324 FAM13BQ9NYF5 915 aa20.87■□□□□ 0.93
CDC42EP3-201ENST00000295324 IQCA1Q86XH1 822 aa20.87■□□□□ 0.93
CDC42EP3-201ENST00000295324 NLRP3Q96P20 1036 aa20.87■□□□□ 0.93
CDC42EP3-201ENST00000295324 CCDC196A0A1B0GTZ2 297 aa20.87■□□□□ 0.93
CDC42EP3-201ENST00000295324 SLC39A6Q13433 755 aa20.87■□□□□ 0.93
CDC42EP3-201ENST00000295324 NBPF14Q5TI25 921 aa20.87■□□□□ 0.93
CDC42EP3-201ENST00000295324 BMP2KQ9NSY1 1161 aaPredicted RBP20.87■□□□□ 0.93
CDC42EP3-201ENST00000295324 ME1P48163 572 aa20.86■□□□□ 0.93
CDC42EP3-201ENST00000295324 XAGE3Q8WTP9 111 aa20.86■□□□□ 0.93
CDC42EP3-201ENST00000295324 ZRANB1Q9UGI0 708 aa20.86■□□□□ 0.93
CDC42EP3-201ENST00000295324 DCAF5Q96JK2 942 aa20.86■□□□□ 0.93
CDC42EP3-201ENST00000295324 ECHDC1Q9NTX5 307 aa20.86■□□□□ 0.93
CDC42EP3-201ENST00000295324 EIF2AK4Q9P2K8 1649 aaKnown RBP20.86■□□□□ 0.93
CDC42EP3-201ENST00000295324 ANXA1P04083 346 aa20.86■□□□□ 0.93
CDC42EP3-201ENST00000295324 SEC63Q9UGP8 760 aaKnown RBP20.86■□□□□ 0.93
CDC42EP3-201ENST00000295324 BAG3O95817 575 aa20.85■□□□□ 0.93
CDC42EP3-201ENST00000295324 COPS6Q7L5N1 327 aa20.85■□□□□ 0.93
CDC42EP3-201ENST00000295324 IP6K1Q92551 441 aa20.85■□□□□ 0.93
CDC42EP3-201ENST00000295324 STIM1Q13586 685 aa20.85■□□□□ 0.93
CDC42EP3-201ENST00000295324 PBRM1Q86U86 1689 aa20.85■□□□□ 0.93
CDC42EP3-201ENST00000295324 BTG4Q9NY30 223 aa20.85■□□□□ 0.93
CDC42EP3-201ENST00000295324 CHPF2Q9P2E5 772 aa20.84■□□□□ 0.93
CDC42EP3-201ENST00000295324 CTCFLQ8NI51 663 aaPredicted RBP20.84■□□□□ 0.93
CDC42EP3-201ENST00000295324 ZHX3Q9H4I2 956 aa20.84■□□□□ 0.93
CDC42EP3-201ENST00000295324 CASTP20810 708 aaKnown RBP20.84■□□□□ 0.93
CDC42EP3-201ENST00000295324 ANKRD18AQ8IVF6 992 aa20.84■□□□□ 0.93
CDC42EP3-201ENST00000295324 ZNF592Q92610 1267 aa20.84■□□□□ 0.93
CDC42EP3-201ENST00000295324 ARHGAP45Q92619 1136 aa20.83■□□□□ 0.93
CDC42EP3-201ENST00000295324 RTCBQ9Y3I0 505 aaKnown RBP20.83■□□□□ 0.93
CDC42EP3-201ENST00000295324 PRPF40AO75400 957 aaKnown RBP20.83■□□□□ 0.93
CDC42EP3-201ENST00000295324 HMGB1P09429 215 aaKnown RBP20.83■□□□□ 0.93
CDC42EP3-201ENST00000295324 UQCRFS1P1P0C7P4 283 aa20.83■□□□□ 0.93
CDC42EP3-201ENST00000295324 PAXIP1Q6ZW49 1069 aaPredicted RBP20.83■□□□□ 0.93
CDC42EP3-201ENST00000295324 ZNF213O14771 459 aa20.83■□□□□ 0.93
CDC42EP3-201ENST00000295324 ALDH1L1O75891 902 aa20.83■□□□□ 0.92
CDC42EP3-201ENST00000295324 CFAP45Q9UL16 551 aa20.83■□□□□ 0.92
CDC42EP3-201ENST00000295324 PCDH11XQ9BZA7 1347 aa20.82■□□□□ 0.92
CDC42EP3-201ENST00000295324 PCDH11YQ9BZA8 1340 aa20.82■□□□□ 0.92
CDC42EP3-201ENST00000295324 RANBP6O60518 1105 aaKnown RBP20.82■□□□□ 0.92
CDC42EP3-201ENST00000295324 BACH2Q9BYV9 841 aa20.82■□□□□ 0.92
CDC42EP3-201ENST00000295324 PRPF40BQ6NWY9 871 aaKnown RBP20.82■□□□□ 0.92
CDC42EP3-201ENST00000295324 NYXQ9GZU5 481 aa20.82■□□□□ 0.92
CDC42EP3-201ENST00000295324 ZFYVE27Q5T4F4 411 aa20.82■□□□□ 0.92
CDC42EP3-201ENST00000295324 EVI5LQ96CN4 794 aa20.82■□□□□ 0.92
CDC42EP3-201ENST00000295324 NIP7Q9Y221 180 aaKnown RBP eCLIP20.82■□□□□ 0.92
CDC42EP3-201ENST00000295324 MTHFSDQ2M296 383 aaKnown RBP20.82■□□□□ 0.92
CDC42EP3-201ENST00000295324 SIRT1Q96EB6 747 aa20.82■□□□□ 0.92
CDC42EP3-201ENST00000295324 PDILTQ8N807 584 aa20.81■□□□□ 0.92
CDC42EP3-201ENST00000295324 NFATC2IPQ8NCF5 419 aa20.81■□□□□ 0.92
CDC42EP3-201ENST00000295324 RSPH6AQ9H0K4 717 aa20.81■□□□□ 0.92
CDC42EP3-201ENST00000295324 TFCP2L1Q9NZI6 479 aa20.81■□□□□ 0.92
CDC42EP3-201ENST00000295324 PIBF1Q8WXW3 757 aa20.81■□□□□ 0.92
CDC42EP3-201ENST00000295324 POLD1P28340 1107 aa20.81■□□□□ 0.92
CDC42EP3-201ENST00000295324 KSR2Q6VAB6 950 aa20.81■□□□□ 0.92
CDC42EP3-201ENST00000295324 DACH1Q9UI36 760 aa20.81■□□□□ 0.92
CDC42EP3-201ENST00000295324 HOXC9P31274 260 aa20.81■□□□□ 0.92
CDC42EP3-201ENST00000295324 TPTE2Q6XPS3 522 aa20.81■□□□□ 0.92
CDC42EP3-201ENST00000295324 MYO1BO43795 1136 aa20.8■□□□□ 0.92
CDC42EP3-201ENST00000295324 EYA1Q99502 592 aa20.8■□□□□ 0.92
CDC42EP3-201ENST00000295324 ABCA5Q8WWZ7 1642 aa20.8■□□□□ 0.92
CDC42EP3-201ENST00000295324 TNIP1Q15025 636 aa20.8■□□□□ 0.92
CDC42EP3-201ENST00000295324 ZFYVE9O95405 1425 aa20.8■□□□□ 0.92
CDC42EP3-201ENST00000295324 SSBP05455 408 aaKnown RBP eCLIP20.79■□□□□ 0.92
CDC42EP3-201ENST00000295324 DZIP3Q86Y13 1208 aaKnown RBP20.79■□□□□ 0.92
CDC42EP3-201ENST00000295324 POLR3AO14802 1390 aaPredicted RBP20.79■□□□□ 0.92
CDC42EP3-201ENST00000295324 SETQ01105 290 aaPredicted RBP20.79■□□□□ 0.92
CDC42EP3-201ENST00000295324 CCDC96Q2M329 555 aa20.79■□□□□ 0.92
CDC42EP3-201ENST00000295324 CAVIN1Q6NZI2 390 aaKnown RBP20.79■□□□□ 0.92
CDC42EP3-201ENST00000295324 GOLIM4O00461 696 aa20.79■□□□□ 0.92
CDC42EP3-201ENST00000295324 SYCP1Q15431 976 aa20.79■□□□□ 0.92
CDC42EP3-201ENST00000295324 UTP14AQ9BVJ6 771 aaKnown RBP20.79■□□□□ 0.92
CDC42EP3-201ENST00000295324 MAP3K19Q56UN5 1328 aa20.79■□□□□ 0.92
CDC42EP3-201ENST00000295324 HLA-DOAP06340 250 aa20.79■□□□□ 0.92
CDC42EP3-201ENST00000295324 GSTO1P78417 241 aa20.78■□□□□ 0.92
CDC42EP3-201ENST00000295324 TESK2Q96S53 571 aa20.78■□□□□ 0.92
CDC42EP3-201ENST00000295324 ORAI2Q96SN7 254 aa20.78■□□□□ 0.92
CDC42EP3-201ENST00000295324 CEP131Q9UPN4 1083 aa20.78■□□□□ 0.92
CDC42EP3-201ENST00000295324 CABP5Q9NP86 173 aa20.78■□□□□ 0.92
CDC42EP3-201ENST00000295324 A0A1W2PP64 1363 aa20.78■□□□□ 0.92
CDC42EP3-201ENST00000295324 NFKBIBQ15653 356 aa20.77■□□□□ 0.92
CDC42EP3-201ENST00000295324 TRIM5Q9C035 493 aa20.77■□□□□ 0.92
CDC42EP3-201ENST00000295324 GPS2Q13227 327 aa20.77■□□□□ 0.92
CDC42EP3-201ENST00000295324 MAP3K5Q99683 1374 aa20.77■□□□□ 0.92
CDC42EP3-201ENST00000295324 C20orf194Q5TEA3 1177 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms