RNA–Protein interactions for RNA: ENST00000290378.4

ACTC1-201, Transcript of actin, alpha, cardiac muscle 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTC1, Length 4,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-201ENST00000290378 CNPY2Q9Y2B0 182 aa13.11□□□□□ -0.31
ACTC1-201ENST00000290378 CT47B1P0C2W7 299 aaPredicted RBP13.11□□□□□ -0.31
ACTC1-201ENST00000290378 SLC39A6Q13433 755 aa13.11□□□□□ -0.31
ACTC1-201ENST00000290378 RIOK3O14730 519 aaKnown RBP13.11□□□□□ -0.31
ACTC1-201ENST00000290378 POLR3GO15318 223 aaPredicted RBP13.11□□□□□ -0.31
ACTC1-201ENST00000290378 VAMP4O75379 141 aa13.11□□□□□ -0.31
ACTC1-201ENST00000290378 TNNT1P13805 278 aa13.11□□□□□ -0.31
ACTC1-201ENST00000290378 INO80Q9ULG1 1556 aaPredicted RBP13.1□□□□□ -0.31
ACTC1-201ENST00000290378 ZSCAN20P17040 1043 aaPredicted RBP13.1□□□□□ -0.31
ACTC1-201ENST00000290378 STK3Q13188 491 aa13.1□□□□□ -0.31
ACTC1-201ENST00000290378 TAF7Q15545 349 aaPredicted RBP13.1□□□□□ -0.31
ACTC1-201ENST00000290378 MADDQ8WXG6 1647 aa13.1□□□□□ -0.31
ACTC1-201ENST00000290378 PPFIA3O75145 1194 aa13.1□□□□□ -0.31
ACTC1-201ENST00000290378 ADAMTS2O95450 1211 aa13.1□□□□□ -0.31
ACTC1-201ENST00000290378 GCP02774 474 aa13.1□□□□□ -0.31
ACTC1-201ENST00000290378 TRMT2AQ8IZ69 625 aaKnown RBP13.1□□□□□ -0.31
ACTC1-201ENST00000290378 MYRIPQ8NFW9 859 aa13.1□□□□□ -0.31
ACTC1-201ENST00000290378 GTF2F1P35269 517 aaKnown RBP eCLIP13.1□□□□□ -0.31
ACTC1-201ENST00000290378 ZNF445P59923 1031 aa13.1□□□□□ -0.31
ACTC1-201ENST00000290378 CCDC85AQ96PX6 553 aaPredicted RBP13.1□□□□□ -0.31
ACTC1-201ENST00000290378 ABCA6Q8N139 1617 aa13.09□□□□□ -0.31
ACTC1-201ENST00000290378 TFIP11Q9UBB9 837 aaKnown RBP13.09□□□□□ -0.31
ACTC1-201ENST00000290378 MEIS3Q99687 375 aa13.09□□□□□ -0.31
ACTC1-201ENST00000290378 CABP4P57796 275 aa13.09□□□□□ -0.31
ACTC1-201ENST00000290378 ATP6V1DQ9Y5K8 247 aa13.09□□□□□ -0.31
ACTC1-201ENST00000290378 ZNF500O60304 480 aaPredicted RBP13.08□□□□□ -0.31
ACTC1-201ENST00000290378 GNAI2P04899 355 aa13.08□□□□□ -0.31
ACTC1-201ENST00000290378 HOXC9P31274 260 aa13.08□□□□□ -0.31
ACTC1-201ENST00000290378 MCM5P33992 734 aa13.08□□□□□ -0.31
ACTC1-201ENST00000290378 A2ML1A8K2U0 1454 aa13.08□□□□□ -0.32
ACTC1-201ENST00000290378 NRDCO43847 1150 aa13.08□□□□□ -0.32
ACTC1-201ENST00000290378 CCDC186Q7Z3E2 898 aa13.08□□□□□ -0.32
ACTC1-201ENST00000290378 DIP2CQ9Y2E4 1556 aa13.08□□□□□ -0.32
ACTC1-201ENST00000290378 PTGS1P23219 599 aa13.08□□□□□ -0.32
ACTC1-201ENST00000290378 CCDC83Q8IWF9 413 aa13.08□□□□□ -0.32
ACTC1-201ENST00000290378 WDR33Q9C0J8 1336 aaKnown RBP13.07□□□□□ -0.32
ACTC1-201ENST00000290378 DDX58O95786 925 aaKnown RBP13.07□□□□□ -0.32
ACTC1-201ENST00000290378 PRIMPOLQ96LW4 560 aa13.07□□□□□ -0.32
ACTC1-201ENST00000290378 SRCIN1Q9C0H9 1055 aa13.07□□□□□ -0.32
ACTC1-201ENST00000290378 EDC4Q6P2E9 1401 aaKnown RBP13.07□□□□□ -0.32
ACTC1-201ENST00000290378 SRGAP3O43295 1099 aa13.07□□□□□ -0.32
ACTC1-201ENST00000290378 TERF1P54274 439 aa13.07□□□□□ -0.32
ACTC1-201ENST00000290378 FLIIQ13045 1269 aa13.07□□□□□ -0.32
ACTC1-201ENST00000290378 ALDH1L2Q3SY69 923 aa13.07□□□□□ -0.32
ACTC1-201ENST00000290378 G2E3Q7L622 706 aa13.07□□□□□ -0.32
ACTC1-201ENST00000290378 TIGD1Q96MW7 591 aa13.07□□□□□ -0.32
ACTC1-201ENST00000290378 TTC21AQ8NDW8 1320 aa13.07□□□□□ -0.32
ACTC1-201ENST00000290378 CCDC192P0DO97 292 aa13.07□□□□□ -0.32
ACTC1-201ENST00000290378 HS1BP3Q53T59 392 aa13.07□□□□□ -0.32
ACTC1-201ENST00000290378 NUTM1Q86Y26 1132 aa13.07□□□□□ -0.32
ACTC1-201ENST00000290378 GNAI3P08754 354 aa13.06□□□□□ -0.32
ACTC1-201ENST00000290378 TAF3Q5VWG9 929 aa13.06□□□□□ -0.32
ACTC1-201ENST00000290378 H3BQV1 296 aa13.06□□□□□ -0.32
ACTC1-201ENST00000290378 IFIT2P09913 472 aaKnown RBP13.06□□□□□ -0.32
ACTC1-201ENST00000290378 IFFO2Q5TF58 517 aa13.06□□□□□ -0.32
ACTC1-201ENST00000290378 USP26Q9BXU7 913 aa13.06□□□□□ -0.32
ACTC1-201ENST00000290378 CPA1P15085 419 aa13.06□□□□□ -0.32
ACTC1-201ENST00000290378 IRX3P78415 501 aaPredicted RBP13.06□□□□□ -0.32
ACTC1-201ENST00000290378 NAA30Q147X3 362 aaPredicted RBP13.06□□□□□ -0.32
ACTC1-201ENST00000290378 TTC22Q5TAA0 569 aa13.06□□□□□ -0.32
ACTC1-201ENST00000290378 PLEKHM2Q8IWE5 1019 aa13.06□□□□□ -0.32
ACTC1-201ENST00000290378 IPO4Q8TEX9 1081 aaKnown RBP13.06□□□□□ -0.32
ACTC1-201ENST00000290378 C19orf44Q9H6X5 657 aa13.06□□□□□ -0.32
ACTC1-201ENST00000290378 FLT4P35916 1363 aa13.06□□□□□ -0.32
ACTC1-201ENST00000290378 KDM4AO75164 1064 aa13.05□□□□□ -0.32
ACTC1-201ENST00000290378 CCDC183Q5T5S1 534 aa13.05□□□□□ -0.32
ACTC1-201ENST00000290378 UTP14CQ5TAP6 766 aaKnown RBP13.05□□□□□ -0.32
ACTC1-201ENST00000290378 CWC27Q6UX04 472 aaKnown RBP13.05□□□□□ -0.32
ACTC1-201ENST00000290378 MRPL50Q8N5N7 158 aaKnown RBP13.05□□□□□ -0.32
ACTC1-201ENST00000290378 LGR6Q9HBX8 967 aa13.05□□□□□ -0.32
ACTC1-201ENST00000290378 ARHGAP31Q2M1Z3 1444 aa13.05□□□□□ -0.32
ACTC1-201ENST00000290378 FAM173BQ6P4H8 233 aa13.05□□□□□ -0.32
ACTC1-201ENST00000290378 TNMDQ9H2S6 317 aa13.05□□□□□ -0.32
ACTC1-201ENST00000290378 LRRFIP2Q9Y608 721 aaKnown RBP13.05□□□□□ -0.32
ACTC1-201ENST00000290378 PLEKHG3A1L390 1219 aa13.05□□□□□ -0.32
ACTC1-201ENST00000290378 PLEKHF1Q96S99 279 aa13.05□□□□□ -0.32
ACTC1-201ENST00000290378 PI4KAP2A4QPH2 592 aa13.04□□□□□ -0.32
ACTC1-201ENST00000290378 HTATSF1O43719 755 aaKnown RBP13.04□□□□□ -0.32
ACTC1-201ENST00000290378 G3BP1Q13283 466 aaKnown RBP eCLIP13.04□□□□□ -0.32
ACTC1-201ENST00000290378 NBPF6Q5VWK0 638 aa13.04□□□□□ -0.32
ACTC1-201ENST00000290378 CADPS2Q86UW7 1296 aa13.04□□□□□ -0.32
ACTC1-201ENST00000290378 CREBRFQ8IUR6 639 aa13.04□□□□□ -0.32
ACTC1-201ENST00000290378 PI4KAP1Q8N8J0 262 aa13.04□□□□□ -0.32
ACTC1-201ENST00000290378 NBPF4Q96M43 638 aa13.04□□□□□ -0.32
ACTC1-201ENST00000290378 TCEANC2Q96MN5 208 aa13.04□□□□□ -0.32
ACTC1-201ENST00000290378 NEUROD6Q96NK8 337 aa13.04□□□□□ -0.32
ACTC1-201ENST00000290378 TOMM22Q9NS69 142 aa13.04□□□□□ -0.32
ACTC1-201ENST00000290378 SPG7Q9UQ90 795 aa13.04□□□□□ -0.32
ACTC1-201ENST00000290378 SYNMO15061 1565 aa13.04□□□□□ -0.32
ACTC1-201ENST00000290378 CCT4P50991 539 aaKnown RBP13.04□□□□□ -0.32
ACTC1-201ENST00000290378 ADGRB3O60242 1522 aa13.04□□□□□ -0.32
ACTC1-201ENST00000290378 GSPT1P15170 499 aaKnown RBP13.03□□□□□ -0.32
ACTC1-201ENST00000290378 FAM184AQ8NB25 1140 aa13.03□□□□□ -0.32
ACTC1-201ENST00000290378 CHPF2Q9P2E5 772 aa13.03□□□□□ -0.32
ACTC1-201ENST00000290378 IL16Q14005 1332 aa13.03□□□□□ -0.32
ACTC1-201ENST00000290378 LUZP1Q86V48 1076 aa13.03□□□□□ -0.32
ACTC1-201ENST00000290378 GLI2P10070 1586 aa13.03□□□□□ -0.32
ACTC1-201ENST00000290378 LRMPQ12912 555 aa13.03□□□□□ -0.32
ACTC1-201ENST00000290378 LARP1BQ659C4 914 aaKnown RBP13.03□□□□□ -0.32
ACTC1-201ENST00000290378 GPATCH11Q8N954 259 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms