RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 WDR17Q8IZU2 1322 aa7.77□□□□□ -1.17
TOPBP1-201ENST00000260810 PIP4K2AP48426 406 aaPredicted RBP7.77□□□□□ -1.17
TOPBP1-201ENST00000260810 ESCO1Q5FWF5 840 aa7.77□□□□□ -1.17
TOPBP1-201ENST00000260810 EIF4A1P60842 406 aaKnown RBP7.77□□□□□ -1.17
TOPBP1-201ENST00000260810 SULT6B1Q6IMI4 303 aa7.77□□□□□ -1.17
TOPBP1-201ENST00000260810 MGAQ8IWI9 3026 aa7.77□□□□□ -1.17
TOPBP1-201ENST00000260810 SPATA31A5Q5VU36 1347 aa7.77□□□□□ -1.17
TOPBP1-201ENST00000260810 SPATA31A7Q8IWB4 1347 aa7.77□□□□□ -1.17
TOPBP1-201ENST00000260810 OTUD7AQ8TE49 926 aaPredicted RBP7.76□□□□□ -1.17
TOPBP1-201ENST00000260810 ANXA1P04083 346 aa7.76□□□□□ -1.17
TOPBP1-201ENST00000260810 PRELPP51888 382 aa7.76□□□□□ -1.17
TOPBP1-201ENST00000260810 ZBTB40Q9NUA8 1239 aa7.76□□□□□ -1.17
TOPBP1-201ENST00000260810 CARMIL3Q8ND23 1372 aa7.76□□□□□ -1.17
TOPBP1-201ENST00000260810 PHKG2P15735 406 aa7.76□□□□□ -1.17
TOPBP1-201ENST00000260810 POLR2AP24928 1970 aaKnown RBP7.75□□□□□ -1.17
TOPBP1-201ENST00000260810 ZZEF1O43149 2961 aa7.75□□□□□ -1.17
TOPBP1-201ENST00000260810 ZC3H6P61129 1189 aaKnown RBP7.75□□□□□ -1.17
TOPBP1-201ENST00000260810 TAF6LQ9Y6J9 622 aa7.75□□□□□ -1.17
TOPBP1-201ENST00000260810 UBN2Q6ZU65 1347 aa7.75□□□□□ -1.17
TOPBP1-201ENST00000260810 INTS5Q6P9B9 1019 aaKnown RBP7.75□□□□□ -1.17
TOPBP1-201ENST00000260810 LOC285556D6RIA3 1793 aa7.75□□□□□ -1.17
TOPBP1-201ENST00000260810 SMIM22K7EJ46 135 aa7.75□□□□□ -1.17
TOPBP1-201ENST00000260810 RFX5P48382 616 aaPredicted RBP7.75□□□□□ -1.17
TOPBP1-201ENST00000260810 NUDCQ9Y266 331 aa7.75□□□□□ -1.17
TOPBP1-201ENST00000260810 IBTKQ9P2D0 1353 aaPredicted RBP7.75□□□□□ -1.17
TOPBP1-201ENST00000260810 C8orf34Q49A92 452 aa7.75□□□□□ -1.17
TOPBP1-201ENST00000260810 DICER1Q9UPY3 1922 aaKnown RBP7.75□□□□□ -1.17
TOPBP1-201ENST00000260810 PLEKHG2Q9H7P9 1386 aa7.75□□□□□ -1.17
TOPBP1-201ENST00000260810 PTPRFP10586 1907 aa7.74□□□□□ -1.17
TOPBP1-201ENST00000260810 RIC1Q4ADV7 1423 aa7.74□□□□□ -1.17
TOPBP1-201ENST00000260810 TSHZ2Q9NRE2 1034 aa7.74□□□□□ -1.17
TOPBP1-201ENST00000260810 NPHP3Q7Z494 1330 aa7.74□□□□□ -1.17
TOPBP1-201ENST00000260810 BCL2L13Q9BXK5 485 aa7.74□□□□□ -1.17
TOPBP1-201ENST00000260810 EVX2Q03828 476 aa7.73□□□□□ -1.17
TOPBP1-201ENST00000260810 PIGBQ92521 554 aa7.73□□□□□ -1.17
TOPBP1-201ENST00000260810 KAT6BQ8WYB5 2073 aa7.73□□□□□ -1.17
TOPBP1-201ENST00000260810 PANK1Q8TE04 598 aa7.73□□□□□ -1.17
TOPBP1-201ENST00000260810 ARFGEF1Q9Y6D6 1849 aa7.73□□□□□ -1.17
TOPBP1-201ENST00000260810 FCHSD2O94868 740 aa7.73□□□□□ -1.17
TOPBP1-201ENST00000260810 EXOSC9Q06265 439 aaKnown RBP7.73□□□□□ -1.17
TOPBP1-201ENST00000260810 ATG3Q9NT62 314 aa7.73□□□□□ -1.17
TOPBP1-201ENST00000260810 ASAP1Q9ULH1 1129 aa7.73□□□□□ -1.17
TOPBP1-201ENST00000260810 GIGYF1O75420 1035 aaPredicted RBP7.72□□□□□ -1.17
TOPBP1-201ENST00000260810 SALL2Q9Y467 1007 aaPredicted RBP7.72□□□□□ -1.17
TOPBP1-201ENST00000260810 UTYO14607 1347 aa7.72□□□□□ -1.17
TOPBP1-201ENST00000260810 CD2BP2O95400 341 aaKnown RBP7.72□□□□□ -1.17
TOPBP1-201ENST00000260810 TMC1Q8TDI8 760 aa7.72□□□□□ -1.17
TOPBP1-201ENST00000260810 OTOFQ9HC10 1997 aa7.72□□□□□ -1.17
TOPBP1-201ENST00000260810 HNRNPUQ00839 825 aaKnown RBP eCLIP7.72□□□□□ -1.17
TOPBP1-201ENST00000260810 SLC39A6Q13433 755 aa7.72□□□□□ -1.17
TOPBP1-201ENST00000260810 NFE2L2Q16236 605 aa7.72□□□□□ -1.17
TOPBP1-201ENST00000260810 USP44Q9H0E7 712 aa7.72□□□□□ -1.17
TOPBP1-201ENST00000260810 TCERG1O14776 1098 aaKnown RBP7.71□□□□□ -1.17
TOPBP1-201ENST00000260810 RRP1P56182 461 aaKnown RBP7.71□□□□□ -1.17
TOPBP1-201ENST00000260810 ZNF692Q9BU19 519 aaPredicted RBP7.71□□□□□ -1.17
TOPBP1-201ENST00000260810 TM4SF1P30408 202 aa7.71□□□□□ -1.17
TOPBP1-201ENST00000260810 PROSER2Q86WR7 435 aaPredicted RBP7.71□□□□□ -1.17
TOPBP1-201ENST00000260810 ZNF496Q96IT1 587 aaPredicted RBP7.71□□□□□ -1.17
TOPBP1-201ENST00000260810 A0A0G2JLW4 131 aa7.71□□□□□ -1.18
TOPBP1-201ENST00000260810 PNMA6EA0A0J9YXQ4 647 aa7.71□□□□□ -1.18
TOPBP1-201ENST00000260810 ABTB2Q8N961 1025 aa7.71□□□□□ -1.18
TOPBP1-201ENST00000260810 ANKRD24Q8TF21 1146 aa7.71□□□□□ -1.18
TOPBP1-201ENST00000260810 SLFNL1Q499Z3 407 aa7.7□□□□□ -1.18
TOPBP1-201ENST00000260810 NLRP6P59044 892 aa7.7□□□□□ -1.18
TOPBP1-201ENST00000260810 UNC5CLQ8IV45 518 aa7.7□□□□□ -1.18
TOPBP1-201ENST00000260810 ZNF428Q96B54 188 aa7.7□□□□□ -1.18
TOPBP1-201ENST00000260810 GSPT1P15170 499 aaKnown RBP7.7□□□□□ -1.18
TOPBP1-201ENST00000260810 RUNDC1Q96C34 613 aa7.7□□□□□ -1.18
TOPBP1-201ENST00000260810 NBPF7P0C2Y1 421 aaPredicted RBP7.7□□□□□ -1.18
TOPBP1-201ENST00000260810 SGIP1Q9BQI5 828 aa7.7□□□□□ -1.18
TOPBP1-201ENST00000260810 CRBNQ96SW2 442 aa7.69□□□□□ -1.18
TOPBP1-201ENST00000260810 AOX1Q06278 1338 aa7.69□□□□□ -1.18
TOPBP1-201ENST00000260810 CFAP44Q96MT7 982 aa7.69□□□□□ -1.18
TOPBP1-201ENST00000260810 MYT1LQ9UL68 1186 aa7.69□□□□□ -1.18
TOPBP1-201ENST00000260810 MAP3K5Q99683 1374 aa7.69□□□□□ -1.18
TOPBP1-201ENST00000260810 MYH2Q9UKX2 1941 aa7.69□□□□□ -1.18
TOPBP1-201ENST00000260810 DDIT3P35638 169 aa7.69□□□□□ -1.18
TOPBP1-201ENST00000260810 CERKQ8TCT0 537 aa7.69□□□□□ -1.18
TOPBP1-201ENST00000260810 SVEP1Q4LDE5 3571 aa7.68□□□□□ -1.18
TOPBP1-201ENST00000260810 C16orf71Q8IYS4 520 aaPredicted RBP7.68□□□□□ -1.18
TOPBP1-201ENST00000260810 MPRIPQ6WCQ1 1025 aa7.68□□□□□ -1.18
TOPBP1-201ENST00000260810 ANKRD44Q8N8A2 993 aa7.68□□□□□ -1.18
TOPBP1-201ENST00000260810 WDR90Q96KV7 1748 aa7.68□□□□□ -1.18
TOPBP1-201ENST00000260810 HLFQ16534 295 aa7.67□□□□□ -1.18
TOPBP1-201ENST00000260810 VGLL2Q8N8G2 317 aa7.67□□□□□ -1.18
TOPBP1-201ENST00000260810 ANO8Q9HCE9 1232 aaPredicted RBP7.67□□□□□ -1.18
TOPBP1-201ENST00000260810 MGAMO43451 1857 aa7.67□□□□□ -1.18
TOPBP1-201ENST00000260810 TIAM2Q8IVF5 1701 aa7.67□□□□□ -1.18
TOPBP1-201ENST00000260810 RNMTO43148 476 aaKnown RBP7.67□□□□□ -1.18
TOPBP1-201ENST00000260810 ILDR2Q71H61 639 aa7.67□□□□□ -1.18
TOPBP1-201ENST00000260810 F6X3S4 739 aa7.67□□□□□ -1.18
TOPBP1-201ENST00000260810 NFATC2IPQ8NCF5 419 aa7.67□□□□□ -1.18
TOPBP1-201ENST00000260810 JCADQ9P266 1359 aa7.67□□□□□ -1.18
TOPBP1-201ENST00000260810 A0A0G2JMZ2 1700 aa7.67□□□□□ -1.18
TOPBP1-201ENST00000260810 IL16Q14005 1332 aa7.66□□□□□ -1.18
TOPBP1-201ENST00000260810 ST3GAL1Q11201 340 aa7.66□□□□□ -1.18
TOPBP1-201ENST00000260810 BEND3Q5T5X7 828 aa7.66□□□□□ -1.18
TOPBP1-201ENST00000260810 WDR63Q8IWG1 891 aa7.66□□□□□ -1.18
TOPBP1-201ENST00000260810 TMEM57Q8N5G2 664 aa7.66□□□□□ -1.18
TOPBP1-201ENST00000260810 POGKQ9P215 609 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms