RNA–Protein interactions for RNA: ENST00000258243.6

URB2-201, Transcript of URB2 ribosome biogenesis 2 homolog (S. cerevisiae), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene URB2, Length 5,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URB2-201ENST00000258243 MKNK2Q9HBH9 465 aa12.79□□□□□ -0.36
URB2-201ENST00000258243 RABEP1Q15276 862 aa12.79□□□□□ -0.36
URB2-201ENST00000258243 MAP3K2Q9Y2U5 619 aa12.79□□□□□ -0.36
URB2-201ENST00000258243 NUTM1Q86Y26 1132 aa12.78□□□□□ -0.36
URB2-201ENST00000258243 TMEM57Q8N5G2 664 aa12.78□□□□□ -0.36
URB2-201ENST00000258243 SEPT11Q9NVA2 429 aaKnown RBP12.78□□□□□ -0.36
URB2-201ENST00000258243 NOL7Q9UMY1 257 aaKnown RBP12.78□□□□□ -0.36
URB2-201ENST00000258243 ODF2Q5BJF6 829 aa12.78□□□□□ -0.36
URB2-201ENST00000258243 TFCP2L1Q9NZI6 479 aa12.78□□□□□ -0.36
URB2-201ENST00000258243 KRT32Q14532 448 aa12.78□□□□□ -0.36
URB2-201ENST00000258243 SSR1P43307 286 aaKnown RBP12.77□□□□□ -0.36
URB2-201ENST00000258243 CCDC152Q4G0S7 254 aa12.77□□□□□ -0.36
URB2-201ENST00000258243 CWC27Q6UX04 472 aaKnown RBP12.77□□□□□ -0.36
URB2-201ENST00000258243 SDF4Q9BRK5 362 aa12.77□□□□□ -0.36
URB2-201ENST00000258243 UQCRHLA0A096LP55 91 aa12.77□□□□□ -0.36
URB2-201ENST00000258243 UQCRHP07919 91 aa12.77□□□□□ -0.36
URB2-201ENST00000258243 PARP3Q9Y6F1 533 aa12.77□□□□□ -0.36
URB2-201ENST00000258243 DISP3Q9P2K9 1392 aa12.77□□□□□ -0.37
URB2-201ENST00000258243 MYO1BO43795 1136 aa12.77□□□□□ -0.37
URB2-201ENST00000258243 CDCA7Q9BWT1 371 aaPredicted RBP12.77□□□□□ -0.37
URB2-201ENST00000258243 NAT10Q9H0A0 1025 aaKnown RBP12.77□□□□□ -0.37
URB2-201ENST00000258243 PTPRCP08575 1304 aa12.77□□□□□ -0.37
URB2-201ENST00000258243 STK3Q13188 491 aa12.77□□□□□ -0.37
URB2-201ENST00000258243 AKAP4Q5JQC9 854 aa12.77□□□□□ -0.37
URB2-201ENST00000258243 CLGNO14967 610 aa12.77□□□□□ -0.37
URB2-201ENST00000258243 LDHCP07864 332 aa12.77□□□□□ -0.37
URB2-201ENST00000258243 JMYQ8N9B5 988 aa12.77□□□□□ -0.37
URB2-201ENST00000258243 STK38Q15208 465 aa12.76□□□□□ -0.37
URB2-201ENST00000258243 AEBP1Q8IUX7 1158 aa12.76□□□□□ -0.37
URB2-201ENST00000258243 BLOC1S2Q6QNY1 142 aa12.76□□□□□ -0.37
URB2-201ENST00000258243 BTG4Q9NY30 223 aa12.76□□□□□ -0.37
URB2-201ENST00000258243 EXOC6BQ9Y2D4 811 aa12.76□□□□□ -0.37
URB2-201ENST00000258243 OFD1O75665 1012 aa12.76□□□□□ -0.37
URB2-201ENST00000258243 FLIIQ13045 1269 aa12.76□□□□□ -0.37
URB2-201ENST00000258243 HSP90AB2PQ58FF8 381 aa12.76□□□□□ -0.37
URB2-201ENST00000258243 PIK3R4Q99570 1358 aa12.76□□□□□ -0.37
URB2-201ENST00000258243 MINDY4BA8MYZ0 360 aa12.76□□□□□ -0.37
URB2-201ENST00000258243 K7ELQ4 463 aaPredicted RBP12.76□□□□□ -0.37
URB2-201ENST00000258243 GLRX3O76003 335 aaKnown RBP12.76□□□□□ -0.37
URB2-201ENST00000258243 RTCBQ9Y3I0 505 aaKnown RBP12.76□□□□□ -0.37
URB2-201ENST00000258243 SHANK2Q9UPX8 1470 aa12.75□□□□□ -0.37
URB2-201ENST00000258243 SPTY2D1Q68D10 685 aaPredicted RBP12.75□□□□□ -0.37
URB2-201ENST00000258243 ZNF444Q8N0Y2 327 aaPredicted RBP12.75□□□□□ -0.37
URB2-201ENST00000258243 WASF1Q92558 559 aa12.75□□□□□ -0.37
URB2-201ENST00000258243 F6X3S4 739 aa12.75□□□□□ -0.37
URB2-201ENST00000258243 ATP5J2-PTCD1G3V325 749 aa12.75□□□□□ -0.37
URB2-201ENST00000258243 NYXQ9GZU5 481 aa12.75□□□□□ -0.37
URB2-201ENST00000258243 SEC63Q9UGP8 760 aaKnown RBP12.75□□□□□ -0.37
URB2-201ENST00000258243 ABCC1P33527 1531 aa12.75□□□□□ -0.37
URB2-201ENST00000258243 ZFYVE16Q7Z3T8 1539 aa12.75□□□□□ -0.37
URB2-201ENST00000258243 LDHAL6AQ6ZMR3 332 aa12.75□□□□□ -0.37
URB2-201ENST00000258243 NAPBQ9H115 298 aa12.75□□□□□ -0.37
URB2-201ENST00000258243 STK32BQ9NY57 414 aa12.74□□□□□ -0.37
URB2-201ENST00000258243 CIZ1Q9ULV3 898 aaPredicted RBP12.74□□□□□ -0.37
URB2-201ENST00000258243 C11orf95C9JLR9 678 aaPredicted RBP12.74□□□□□ -0.37
URB2-201ENST00000258243 SETSIPP0DME0 302 aa12.74□□□□□ -0.37
URB2-201ENST00000258243 TNIP1Q15025 636 aa12.74□□□□□ -0.37
URB2-201ENST00000258243 C16orf71Q8IYS4 520 aaPredicted RBP12.74□□□□□ -0.37
URB2-201ENST00000258243 MAGEC2Q9UBF1 373 aaPredicted RBP12.74□□□□□ -0.37
URB2-201ENST00000258243 ATP7AQ04656 1500 aa12.74□□□□□ -0.37
URB2-201ENST00000258243 GCP02774 474 aa12.74□□□□□ -0.37
URB2-201ENST00000258243 NAP1L1P55209 391 aaKnown RBP12.74□□□□□ -0.37
URB2-201ENST00000258243 HDAC9Q9UKV0 1011 aa12.74□□□□□ -0.37
URB2-201ENST00000258243 NEO1Q92859 1461 aa12.74□□□□□ -0.37
URB2-201ENST00000258243 ZSCAN30Q86W11 494 aa12.74□□□□□ -0.37
URB2-201ENST00000258243 SSH1Q8WYL5 1049 aa12.74□□□□□ -0.37
URB2-201ENST00000258243 LRRFIP2Q9Y608 721 aaKnown RBP12.74□□□□□ -0.37
URB2-201ENST00000258243 MPNDQ8N594 471 aa12.73□□□□□ -0.37
URB2-201ENST00000258243 PDRG1Q9NUG6 133 aa12.73□□□□□ -0.37
URB2-201ENST00000258243 PCDH11XQ9BZA7 1347 aa12.73□□□□□ -0.37
URB2-201ENST00000258243 PCDH11YQ9BZA8 1340 aa12.73□□□□□ -0.37
URB2-201ENST00000258243 FLT4P35916 1363 aa12.73□□□□□ -0.37
URB2-201ENST00000258243 KINO60870 393 aaKnown RBP12.73□□□□□ -0.37
URB2-201ENST00000258243 LETM1O95202 739 aaPredicted RBP12.73□□□□□ -0.37
URB2-201ENST00000258243 C20orf194Q5TEA3 1177 aa12.73□□□□□ -0.37
URB2-201ENST00000258243 WDR78Q5VTH9 848 aa12.73□□□□□ -0.37
URB2-201ENST00000258243 ANKRD13DQ6ZTN6 518 aa12.73□□□□□ -0.37
URB2-201ENST00000258243 NLRP3Q96P20 1036 aa12.73□□□□□ -0.37
URB2-201ENST00000258243 ZHX3Q9H4I2 956 aa12.73□□□□□ -0.37
URB2-201ENST00000258243 MYO6Q9UM54 1294 aa12.73□□□□□ -0.37
URB2-201ENST00000258243 U3KPZ7 1027 aaPredicted RBP12.73□□□□□ -0.37
URB2-201ENST00000258243 BAG3O95817 575 aa12.73□□□□□ -0.37
URB2-201ENST00000258243 MX1P20591 662 aa12.73□□□□□ -0.37
URB2-201ENST00000258243 TTF1Q15361 905 aaPredicted RBP12.73□□□□□ -0.37
URB2-201ENST00000258243 ANKRD18AQ8IVF6 992 aa12.73□□□□□ -0.37
URB2-201ENST00000258243 UBE2Q2Q8WVN8 375 aa12.73□□□□□ -0.37
URB2-201ENST00000258243 BOLA2Q9H3K6 86 aa12.73□□□□□ -0.37
URB2-201ENST00000258243 CCDC96Q2M329 555 aa12.73□□□□□ -0.37
URB2-201ENST00000258243 JAKMIP1Q96N16 626 aaKnown RBP12.73□□□□□ -0.37
URB2-201ENST00000258243 ABCA5Q8WWZ7 1642 aa12.72□□□□□ -0.37
URB2-201ENST00000258243 GSTO1P78417 241 aa12.72□□□□□ -0.37
URB2-201ENST00000258243 SIRT1Q96EB6 747 aa12.72□□□□□ -0.37
URB2-201ENST00000258243 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.72□□□□□ -0.372e-6■■■■■ 149.1
URB2-201ENST00000258243 CLEC11AQ9Y240 323 aa12.72□□□□□ -0.37
URB2-201ENST00000258243 CFAP74Q9C0B2 1584 aa12.72□□□□□ -0.37
URB2-201ENST00000258243 GOLGA6L10A6NI86 522 aa12.72□□□□□ -0.37
URB2-201ENST00000258243 PIBF1Q8WXW3 757 aa12.72□□□□□ -0.37
URB2-201ENST00000258243 TRIM5Q9C035 493 aa12.72□□□□□ -0.37
URB2-201ENST00000258243 NIP7Q9Y221 180 aaKnown RBP eCLIP12.72□□□□□ -0.37
URB2-201ENST00000258243 PIP4K2AP48426 406 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms