RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 ESCO1Q5FWF5 840 aa26.37■■□□□ 1.81
SH2D3A-201ENST00000245908 BEND3Q5T5X7 828 aa26.37■■□□□ 1.81
SH2D3A-201ENST00000245908 DNAAF4Q8WXU2 420 aa26.37■■□□□ 1.81
SH2D3A-201ENST00000245908 IL1RAPL2Q9NP60 686 aa26.37■■□□□ 1.81
SH2D3A-201ENST00000245908 PALD1Q9ULE6 856 aa26.37■■□□□ 1.81
SH2D3A-201ENST00000245908 SURF6O75683 361 aaKnown RBP26.36■■□□□ 1.81
SH2D3A-201ENST00000245908 ZNF530Q6P9A1 599 aaPredicted RBP26.36■■□□□ 1.81
SH2D3A-201ENST00000245908 SLIT3O75094 1523 aa26.35■■□□□ 1.81
SH2D3A-201ENST00000245908 PLEKHO1Q53GL0 409 aaPredicted RBP26.35■■□□□ 1.81
SH2D3A-201ENST00000245908 RHPN1Q8TCX5 695 aa26.35■■□□□ 1.81
SH2D3A-201ENST00000245908 KCNQ3O43525 872 aa26.35■■□□□ 1.81
SH2D3A-201ENST00000245908 TEFQ10587 303 aa26.35■■□□□ 1.81
SH2D3A-201ENST00000245908 CUL4AQ13619 759 aa26.35■■□□□ 1.81
SH2D3A-201ENST00000245908 RBM33Q96EV2 1170 aaKnown RBP26.35■■□□□ 1.81
SH2D3A-201ENST00000245908 OVOS2A0A0G2JMS6 1433 aa26.35■■□□□ 1.81
SH2D3A-201ENST00000245908 PI4KAP2A4QPH2 592 aa26.34■■□□□ 1.81
SH2D3A-201ENST00000245908 BTBD11A6QL63 1104 aa26.34■■□□□ 1.81
SH2D3A-201ENST00000245908 SRGAP3O43295 1099 aa26.34■■□□□ 1.81
SH2D3A-201ENST00000245908 NBPF7P0C2Y1 421 aaPredicted RBP26.34■■□□□ 1.81
SH2D3A-201ENST00000245908 NUTM1Q86Y26 1132 aa26.34■■□□□ 1.81
SH2D3A-201ENST00000245908 PI4KAP1Q8N8J0 262 aa26.34■■□□□ 1.81
SH2D3A-201ENST00000245908 LRRC59Q96AG4 307 aaKnown RBP26.34■■□□□ 1.81
SH2D3A-201ENST00000245908 KIF1BPQ96EK5 621 aa26.34■■□□□ 1.81
SH2D3A-201ENST00000245908 AMOTQ4VCS5 1084 aa26.33■■□□□ 1.81
SH2D3A-201ENST00000245908 PI4K2BQ8TCG2 481 aa26.33■■□□□ 1.81
SH2D3A-201ENST00000245908 ADCY9O60503 1353 aa26.33■■□□□ 1.81
SH2D3A-201ENST00000245908 CAMTA1Q9Y6Y1 1673 aa26.32■■□□□ 1.8
SH2D3A-201ENST00000245908 ZBTB7CA1YPR0 619 aa26.32■■□□□ 1.8
SH2D3A-201ENST00000245908 RRP9O43818 475 aaKnown RBP26.32■■□□□ 1.8
SH2D3A-201ENST00000245908 ZNF445P59923 1031 aa26.32■■□□□ 1.8
SH2D3A-201ENST00000245908 PXDNQ92626 1479 aa26.32■■□□□ 1.8
SH2D3A-201ENST00000245908 CRYBG1Q9Y4K1 1723 aa26.31■■□□□ 1.8
SH2D3A-201ENST00000245908 NAP1L5Q96NT1 182 aaPredicted RBP26.31■■□□□ 1.8
SH2D3A-201ENST00000245908 RNMTO43148 476 aaKnown RBP26.3■■□□□ 1.8
SH2D3A-201ENST00000245908 MPRIPQ6WCQ1 1025 aa26.3■■□□□ 1.8
SH2D3A-201ENST00000245908 ARHGEF25Q86VW2 580 aa26.3■■□□□ 1.8
SH2D3A-201ENST00000245908 INTS4Q96HW7 963 aaKnown RBP26.3■■□□□ 1.8
SH2D3A-201ENST00000245908 HSP90AB4PQ58FF6 505 aa26.3■■□□□ 1.8
SH2D3A-201ENST00000245908 IL25Q9H293 177 aa26.29■■□□□ 1.8
SH2D3A-201ENST00000245908 GCP02774 474 aa26.28■■□□□ 1.8
SH2D3A-201ENST00000245908 DBF4Q9UBU7 674 aaPredicted RBP26.28■■□□□ 1.8
SH2D3A-201ENST00000245908 USP42Q9H9J4 1324 aaKnown RBP26.28■■□□□ 1.8
SH2D3A-201ENST00000245908 HSPA4P34932 840 aa26.28■■□□□ 1.8
SH2D3A-201ENST00000245908 SIPA1L3O60292 1781 aaPredicted RBP26.28■■□□□ 1.8
SH2D3A-201ENST00000245908 MTX1Q13505 466 aa26.27■■□□□ 1.8
SH2D3A-201ENST00000245908 CAVIN1Q6NZI2 390 aaKnown RBP26.27■■□□□ 1.8
SH2D3A-201ENST00000245908 HEG1Q9ULI3 1381 aa26.27■■□□□ 1.8
SH2D3A-201ENST00000245908 ANXA1P04083 346 aa26.27■■□□□ 1.8
SH2D3A-201ENST00000245908 C1orf141Q5JVX7 400 aa26.27■■□□□ 1.8
SH2D3A-201ENST00000245908 PRPF40AO75400 957 aaKnown RBP26.26■■□□□ 1.79
SH2D3A-201ENST00000245908 BRD1O95696 1058 aa26.26■■□□□ 1.79
SH2D3A-201ENST00000245908 ZSCAN23Q3MJ62 389 aa26.26■■□□□ 1.79
SH2D3A-201ENST00000245908 LMTK3Q96Q04 1460 aa26.26■■□□□ 1.79
SH2D3A-201ENST00000245908 NASPP49321 788 aaPredicted RBP26.26■■□□□ 1.79
SH2D3A-201ENST00000245908 TRPM3Q9HCF6 1732 aaPredicted RBP26.25■■□□□ 1.79
SH2D3A-201ENST00000245908 SGSM2O43147 1006 aa26.25■■□□□ 1.79
SH2D3A-201ENST00000245908 NCLP19338 710 aaKnown RBP26.25■■□□□ 1.79
SH2D3A-201ENST00000245908 HSP90AA2PQ14568 343 aaPredicted RBP26.25■■□□□ 1.79
SH2D3A-201ENST00000245908 RAD50Q92878 1312 aa26.25■■□□□ 1.79
SH2D3A-201ENST00000245908 ALDH1L1O75891 902 aa26.25■■□□□ 1.79
SH2D3A-201ENST00000245908 CNTROBQ8N137 903 aa26.25■■□□□ 1.79
SH2D3A-201ENST00000245908 GPT2Q8TD30 523 aa26.25■■□□□ 1.79
SH2D3A-201ENST00000245908 ADAMTS7Q9UKP4 1686 aa26.24■■□□□ 1.79
SH2D3A-201ENST00000245908 MAP4K4O95819 1239 aaPredicted RBP26.24■■□□□ 1.79
SH2D3A-201ENST00000245908 ANKRD24Q8TF21 1146 aa26.24■■□□□ 1.79
SH2D3A-201ENST00000245908 GIGYF1O75420 1035 aaPredicted RBP26.23■■□□□ 1.79
SH2D3A-201ENST00000245908 CCDC173Q0VFZ6 552 aa26.23■■□□□ 1.79
SH2D3A-201ENST00000245908 PPP1R9BQ96SB3 815 aa26.23■■□□□ 1.79
SH2D3A-201ENST00000245908 ORAI2Q96SN7 254 aa26.23■■□□□ 1.79
SH2D3A-201ENST00000245908 TTC41PQ6P2S7 1318 aa26.23■■□□□ 1.79
SH2D3A-201ENST00000245908 NPHP4O75161 1426 aaPredicted RBP26.23■■□□□ 1.79
SH2D3A-201ENST00000245908 ESPNB1AK53 854 aa26.22■■□□□ 1.79
SH2D3A-201ENST00000245908 TRIM44Q96DX7 344 aaPredicted RBP26.22■■□□□ 1.79
SH2D3A-201ENST00000245908 UPF3BQ9BZI7 483 aaKnown RBP26.22■■□□□ 1.79
SH2D3A-201ENST00000245908 MAP3K2Q9Y2U5 619 aa26.21■■□□□ 1.79
SH2D3A-201ENST00000245908 KSR2Q6VAB6 950 aa26.21■■□□□ 1.79
SH2D3A-201ENST00000245908 LSG1Q9H089 658 aaKnown RBP26.21■■□□□ 1.79
SH2D3A-201ENST00000245908 NOL8Q76FK4 1167 aaKnown RBP26.2■■□□□ 1.78
SH2D3A-201ENST00000245908 GLRX3O76003 335 aaKnown RBP26.19■■□□□ 1.78
SH2D3A-201ENST00000245908 XPCQ01831 940 aaPredicted RBP26.19■■□□□ 1.78
SH2D3A-201ENST00000245908 PROSER3Q2NL68 480 aa26.19■■□□□ 1.78
SH2D3A-201ENST00000245908 ERBB4Q15303 1308 aa26.19■■□□□ 1.78
SH2D3A-201ENST00000245908 PLEKHG5O94827 1062 aa26.19■■□□□ 1.78
SH2D3A-201ENST00000245908 HDAC5Q9UQL6 1122 aa26.19■■□□□ 1.78
SH2D3A-201ENST00000245908 ADAMTSL3P82987 1691 aa26.18■■□□□ 1.78
SH2D3A-201ENST00000245908 OS9Q13438 667 aaPredicted RBP26.18■■□□□ 1.78
SH2D3A-201ENST00000245908 CHAMP1Q96JM3 812 aa26.18■■□□□ 1.78
SH2D3A-201ENST00000245908 FOXD4L5Q5VV16 416 aaPredicted RBP26.18■■□□□ 1.78
SH2D3A-201ENST00000245908 VSIG10Q8N0Z9 540 aa26.18■■□□□ 1.78
SH2D3A-201ENST00000245908 FOXD4L4Q8WXT5 416 aaPredicted RBP26.18■■□□□ 1.78
SH2D3A-201ENST00000245908 C9orf78Q9NZ63 289 aaPredicted RBP26.18■■□□□ 1.78
SH2D3A-201ENST00000245908 ZMYND15Q9H091 742 aa26.17■■□□□ 1.78
SH2D3A-201ENST00000245908 HYPKQ9NX55 129 aa26.17■■□□□ 1.78
SH2D3A-201ENST00000245908 SNX14Q9Y5W7 946 aa26.17■■□□□ 1.78
SH2D3A-201ENST00000245908 KIF1AQ12756 1690 aa26.17■■□□□ 1.78
SH2D3A-201ENST00000245908 MBD3O95983 291 aa26.17■■□□□ 1.78
SH2D3A-201ENST00000245908 CLASRPQ8N2M8 674 aaKnown RBP26.17■■□□□ 1.78
SH2D3A-201ENST00000245908 ANP32BQ92688 251 aaKnown RBP26.17■■□□□ 1.78
SH2D3A-201ENST00000245908 RBM27Q9P2N5 1060 aaKnown RBP26.17■■□□□ 1.78
SH2D3A-201ENST00000245908 RGPD5Q99666 1765 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms