RNA–Protein interactions for RNA: ENST00000245323.4

EFNB2-201, Transcript of ephrin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB2, Length 4,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2-201ENST00000245323 PLEKHG3A1L390 1219 aa13.59□□□□□ -0.23
EFNB2-201ENST00000245323 RABEP1Q15276 862 aa13.59□□□□□ -0.23
EFNB2-201ENST00000245323 IL27Q8NEV9 243 aa13.59□□□□□ -0.23
EFNB2-201ENST00000245323 DDX46Q7L014 1031 aaKnown RBP13.59□□□□□ -0.23
EFNB2-201ENST00000245323 KLHDC4Q8TBB5 520 aa13.59□□□□□ -0.23
EFNB2-201ENST00000245323 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.59□□□□□ -0.23
EFNB2-201ENST00000245323 GLRX3O76003 335 aaKnown RBP13.59□□□□□ -0.23
EFNB2-201ENST00000245323 PSMA5P28066 241 aa13.59□□□□□ -0.23
EFNB2-201ENST00000245323 CYP46A1Q9Y6A2 500 aa13.59□□□□□ -0.23
EFNB2-201ENST00000245323 PTPRCP08575 1304 aa13.58□□□□□ -0.23
EFNB2-201ENST00000245323 FERMT3Q86UX7 667 aa13.58□□□□□ -0.23
EFNB2-201ENST00000245323 IL16Q14005 1332 aa13.58□□□□□ -0.24
EFNB2-201ENST00000245323 BLOC1S2Q6QNY1 142 aa13.58□□□□□ -0.24
EFNB2-201ENST00000245323 JAG2Q9Y219 1238 aa13.58□□□□□ -0.24
EFNB2-201ENST00000245323 NIP7Q9Y221 180 aaKnown RBP eCLIP13.58□□□□□ -0.24
EFNB2-201ENST00000245323 TCEANC2Q96MN5 208 aa13.58□□□□□ -0.24
EFNB2-201ENST00000245323 PIK3R4Q99570 1358 aa13.57□□□□□ -0.24
EFNB2-201ENST00000245323 HAND2P61296 217 aa13.57□□□□□ -0.24
EFNB2-201ENST00000245323 NBPF5PQ86XG9 351 aaPredicted RBP13.57□□□□□ -0.24
EFNB2-201ENST00000245323 RAB11FIP4Q86YS3 637 aa13.57□□□□□ -0.24
EFNB2-201ENST00000245323 FAM89AQ96GI7 184 aa13.57□□□□□ -0.24
EFNB2-201ENST00000245323 ANKRD18BA2A2Z9 1011 aa13.57□□□□□ -0.24
EFNB2-201ENST00000245323 K7ELQ4 463 aaPredicted RBP13.57□□□□□ -0.24
EFNB2-201ENST00000245323 AIDAQ96BJ3 306 aa13.57□□□□□ -0.24
EFNB2-201ENST00000245323 ZNF496Q96IT1 587 aaPredicted RBP13.57□□□□□ -0.24
EFNB2-201ENST00000245323 DNAJC5Q9H3Z4 198 aa13.57□□□□□ -0.24
EFNB2-201ENST00000245323 CASTP20810 708 aaKnown RBP13.57□□□□□ -0.24
EFNB2-201ENST00000245323 GRM8O00222 908 aa13.56□□□□□ -0.24
EFNB2-201ENST00000245323 KCNQ4P56696 695 aa13.56□□□□□ -0.24
EFNB2-201ENST00000245323 ZNF790Q6PG37 636 aa13.56□□□□□ -0.24
EFNB2-201ENST00000245323 ZNF622Q969S3 477 aaKnown RBP eCLIP13.56□□□□□ -0.24
EFNB2-201ENST00000245323 KSR2Q6VAB6 950 aa13.56□□□□□ -0.24
EFNB2-201ENST00000245323 SPATA31E1Q6ZUB1 1445 aa13.56□□□□□ -0.24
EFNB2-201ENST00000245323 RHPN1Q8TCX5 695 aa13.56□□□□□ -0.24
EFNB2-201ENST00000245323 DCAF5Q96JK2 942 aa13.56□□□□□ -0.24
EFNB2-201ENST00000245323 TRPM2O94759 1503 aa13.56□□□□□ -0.24
EFNB2-201ENST00000245323 PRDM15P57071 1507 aaPredicted RBP13.56□□□□□ -0.24
EFNB2-201ENST00000245323 MAP3K5Q99683 1374 aa13.56□□□□□ -0.24
EFNB2-201ENST00000245323 MLH3Q9UHC1 1453 aa13.56□□□□□ -0.24
EFNB2-201ENST00000245323 EDC4Q6P2E9 1401 aaKnown RBP13.55□□□□□ -0.24
EFNB2-201ENST00000245323 HIP1O00291 1037 aa13.55□□□□□ -0.24
EFNB2-201ENST00000245323 TPM4P67936 248 aa13.55□□□□□ -0.24
EFNB2-201ENST00000245323 SART3Q15020 963 aaKnown RBP13.55□□□□□ -0.24
EFNB2-201ENST00000245323 SAFBQ15424 915 aaKnown RBP eCLIP13.55□□□□□ -0.24
EFNB2-201ENST00000245323 CCDC34Q96HJ3 373 aa13.55□□□□□ -0.24
EFNB2-201ENST00000245323 DZIP3Q86Y13 1208 aaKnown RBP13.55□□□□□ -0.24
EFNB2-201ENST00000245323 ZNF592Q92610 1267 aa13.55□□□□□ -0.24
EFNB2-201ENST00000245323 MAGI2Q86UL8 1455 aa13.55□□□□□ -0.24
EFNB2-201ENST00000245323 ARHGEF5Q12774 1597 aa13.55□□□□□ -0.24
EFNB2-201ENST00000245323 DNAJC10Q8IXB1 793 aa13.55□□□□□ -0.24
EFNB2-201ENST00000245323 IL17REQ8NFR9 667 aa13.55□□□□□ -0.24
EFNB2-201ENST00000245323 HSP90AB3PQ58FF7 597 aa13.54□□□□□ -0.24
EFNB2-201ENST00000245323 TBC1D9Q6ZT07 1266 aa13.54□□□□□ -0.24
EFNB2-201ENST00000245323 RPGRQ92834 1020 aaKnown RBP13.54□□□□□ -0.24
EFNB2-201ENST00000245323 TBC1D2Q9BYX2 928 aa13.54□□□□□ -0.24
EFNB2-201ENST00000245323 NACAP1Q9BZK3 213 aa13.54□□□□□ -0.24
EFNB2-201ENST00000245323 ECHDC1Q9NTX5 307 aa13.54□□□□□ -0.24
EFNB2-201ENST00000245323 SDF4Q9BRK5 362 aa13.54□□□□□ -0.24
EFNB2-201ENST00000245323 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.54□□□□□ -0.24
EFNB2-201ENST00000245323 PIK3C2GO75747 1445 aa13.53□□□□□ -0.24
EFNB2-201ENST00000245323 HCLS1P14317 486 aaPredicted RBP13.53□□□□□ -0.24
EFNB2-201ENST00000245323 TPD52L1Q16890 204 aaPredicted RBP13.53□□□□□ -0.24
EFNB2-201ENST00000245323 OTUD7AQ8TE49 926 aaPredicted RBP13.53□□□□□ -0.24
EFNB2-201ENST00000245323 EIF2AK4Q9P2K8 1649 aaKnown RBP13.53□□□□□ -0.24
EFNB2-201ENST00000245323 CAVIN4Q5BKX8 364 aa13.53□□□□□ -0.24
EFNB2-201ENST00000245323 TEX13AQ9BXU3 409 aaPredicted RBP13.53□□□□□ -0.24
EFNB2-201ENST00000245323 DTNBO60941 627 aa13.53□□□□□ -0.24
EFNB2-201ENST00000245323 NASPP49321 788 aaPredicted RBP13.53□□□□□ -0.24
EFNB2-201ENST00000245323 PDRG1Q9NUG6 133 aa13.53□□□□□ -0.24
EFNB2-201ENST00000245323 TFCP2L1Q9NZI6 479 aa13.53□□□□□ -0.24
EFNB2-201ENST00000245323 USP16Q9Y5T5 823 aa13.53□□□□□ -0.24
EFNB2-201ENST00000245323 SBNO1A3KN83 1393 aa13.53□□□□□ -0.24
EFNB2-201ENST00000245323 SETD1BQ9UPS6 1966 aaKnown RBP13.53□□□□□ -0.24
EFNB2-201ENST00000245323 RAB11FIP3O75154 756 aa13.53□□□□□ -0.24
EFNB2-201ENST00000245323 GUCY1B3Q02153 619 aa13.53□□□□□ -0.24
EFNB2-201ENST00000245323 MCM4P33991 863 aa13.52□□□□□ -0.24
EFNB2-201ENST00000245323 CCDC83Q8IWF9 413 aa13.52□□□□□ -0.24
EFNB2-201ENST00000245323 F8W031 263 aaPredicted RBP13.52□□□□□ -0.25
EFNB2-201ENST00000245323 GNPATO15228 680 aa13.52□□□□□ -0.25
EFNB2-201ENST00000245323 LINS1Q8NG48 757 aa13.52□□□□□ -0.25
EFNB2-201ENST00000245323 SETDB2Q96T68 719 aa13.52□□□□□ -0.25
EFNB2-201ENST00000245323 AKAP2Q9Y2D5 859 aa13.52□□□□□ -0.25
EFNB2-201ENST00000245323 SDSP20132 328 aa13.51□□□□□ -0.25
EFNB2-201ENST00000245323 LARP1BQ659C4 914 aaKnown RBP13.51□□□□□ -0.25
EFNB2-201ENST00000245323 LRRC2Q9BYS8 371 aa13.51□□□□□ -0.25
EFNB2-201ENST00000245323 TCEAL9Q9UHQ7 104 aa13.51□□□□□ -0.25
EFNB2-201ENST00000245323 CHL1O00533 1208 aa13.51□□□□□ -0.25
EFNB2-201ENST00000245323 CCDC73Q6ZRK6 1079 aa13.51□□□□□ -0.25
EFNB2-201ENST00000245323 ANKRD44Q8N8A2 993 aa13.51□□□□□ -0.25
EFNB2-201ENST00000245323 SEC24BO95487 1268 aa13.51□□□□□ -0.25
EFNB2-201ENST00000245323 NDUFB9Q9Y6M9 179 aa13.51□□□□□ -0.25
EFNB2-201ENST00000245323 NBPF7P0C2Y1 421 aaPredicted RBP13.51□□□□□ -0.25
EFNB2-201ENST00000245323 TIMM10P62072 90 aa13.51□□□□□ -0.25
EFNB2-201ENST00000245323 CCAR2Q8N163 923 aaKnown RBP13.51□□□□□ -0.25
EFNB2-201ENST00000245323 SASS6Q6UVJ0 657 aa13.5□□□□□ -0.25
EFNB2-201ENST00000245323 DZIP1Q86YF9 867 aaKnown RBP13.5□□□□□ -0.25
EFNB2-201ENST00000245323 ZNF594Q96JF6 807 aaPredicted RBP13.5□□□□□ -0.25
EFNB2-201ENST00000245323 CCDC144CPQ8IYA2 1237 aa13.5□□□□□ -0.25
EFNB2-201ENST00000245323 ARHGAP45Q92619 1136 aa13.5□□□□□ -0.25
EFNB2-201ENST00000245323 UBAC1Q9BSL1 405 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms