RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 OTUD7AQ8TE49 926 aaPredicted RBP36.79■■■■□ 3.48
PABPN1-201ENST00000216727 SSH3Q8TE77 659 aa36.79■■■■□ 3.48
PABPN1-201ENST00000216727 RBM25P49756 843 aaKnown RBP36.78■■■■□ 3.48
PABPN1-201ENST00000216727 CARD10Q9BWT7 1032 aa36.78■■■■□ 3.48
PABPN1-201ENST00000216727 OSBPL3Q9H4L5 887 aa36.78■■■■□ 3.48
PABPN1-201ENST00000216727 IBTKQ9P2D0 1353 aaPredicted RBP36.78■■■■□ 3.48
PABPN1-201ENST00000216727 EIF5BO60841 1220 aaKnown RBP36.78■■■■□ 3.48
PABPN1-201ENST00000216727 ALDH1L1O75891 902 aa36.78■■■■□ 3.48
PABPN1-201ENST00000216727 PDIA6Q15084 440 aa36.78■■■■□ 3.48
PABPN1-201ENST00000216727 EXOC6BQ9Y2D4 811 aa36.78■■■■□ 3.48
PABPN1-201ENST00000216727 PCDH11XQ9BZA7 1347 aa36.77■■■■□ 3.48
PABPN1-201ENST00000216727 PCDH11YQ9BZA8 1340 aa36.77■■■■□ 3.48
PABPN1-201ENST00000216727 C5P01031 1676 aa36.77■■■■□ 3.48
PABPN1-201ENST00000216727 MAP3K2Q9Y2U5 619 aa36.76■■■■□ 3.48
PABPN1-201ENST00000216727 LRRCC1Q9C099 1032 aa36.76■■■■□ 3.47
PABPN1-201ENST00000216727 ZCRB1Q8TBF4 217 aaKnown RBP36.75■■■■□ 3.47
PABPN1-201ENST00000216727 ZNF496Q96IT1 587 aaPredicted RBP36.75■■■■□ 3.47
PABPN1-201ENST00000216727 TTC5Q8N0Z6 440 aa36.75■■■■□ 3.47
PABPN1-201ENST00000216727 DDX58O95786 925 aaKnown RBP36.74■■■■□ 3.47
PABPN1-201ENST00000216727 NBPF7P0C2Y1 421 aaPredicted RBP36.74■■■■□ 3.47
PABPN1-201ENST00000216727 POLA2Q14181 598 aa36.74■■■■□ 3.47
PABPN1-201ENST00000216727 CABP4P57796 275 aa36.73■■■■□ 3.47
PABPN1-201ENST00000216727 NBR1Q14596 966 aa36.73■■■■□ 3.47
PABPN1-201ENST00000216727 SNRPA1P09661 255 aaKnown RBP36.72■■■■□ 3.47
PABPN1-201ENST00000216727 FMNL2Q96PY5 1086 aa36.71■■■■□ 3.47
PABPN1-201ENST00000216727 IL2RBP14784 551 aa36.71■■■■□ 3.47
PABPN1-201ENST00000216727 PPP1R42Q7Z4L9 355 aa36.71■■■■□ 3.47
PABPN1-201ENST00000216727 SALL3Q9BXA9 1300 aa36.7■■■■□ 3.47
PABPN1-201ENST00000216727 PDE1AP54750 535 aa36.69■■■■□ 3.46
PABPN1-201ENST00000216727 NKX1-1Q15270 411 aaPredicted RBP36.69■■■■□ 3.46
PABPN1-201ENST00000216727 HDAC5Q9UQL6 1122 aa36.69■■■■□ 3.46
PABPN1-201ENST00000216727 LINS1Q8NG48 757 aa36.68■■■■□ 3.46
PABPN1-201ENST00000216727 TBC1D2Q9BYX2 928 aa36.68■■■■□ 3.46
PABPN1-201ENST00000216727 BCL11AQ9H165 835 aa36.68■■■■□ 3.46
PABPN1-201ENST00000216727 RAB11FIP3O75154 756 aa36.67■■■■□ 3.46
PABPN1-201ENST00000216727 ERVV-2B6SEH9 535 aa36.66■■■■□ 3.46
PABPN1-201ENST00000216727 SDSP20132 328 aa36.66■■■■□ 3.46
PABPN1-201ENST00000216727 MTX1Q13505 466 aa36.66■■■■□ 3.46
PABPN1-201ENST00000216727 LARP1Q6PKG0 1096 aaKnown RBP36.66■■■■□ 3.46
PABPN1-201ENST00000216727 EVA1CP58658 441 aa36.65■■■■□ 3.46
PABPN1-201ENST00000216727 SRGAP3O43295 1099 aa36.64■■■■□ 3.46
PABPN1-201ENST00000216727 STRN4Q9NRL3 753 aa36.64■■■■□ 3.46
PABPN1-201ENST00000216727 C9orf78Q9NZ63 289 aaPredicted RBP36.64■■■■□ 3.46
PABPN1-201ENST00000216727 GLI3P10071 1580 aa36.63■■■■□ 3.45
PABPN1-201ENST00000216727 USP35Q9P2H5 1018 aa36.63■■■■□ 3.45
PABPN1-201ENST00000216727 USP16Q9Y5T5 823 aa36.63■■■■□ 3.45
PABPN1-201ENST00000216727 UTYO14607 1347 aa36.62■■■■□ 3.45
PABPN1-201ENST00000216727 LRP10Q7Z4F1 713 aa36.62■■■■□ 3.45
PABPN1-201ENST00000216727 SHANK3Q9BYB0 1731 aa36.62■■■■□ 3.45
PABPN1-201ENST00000216727 AIMP1Q12904 312 aaKnown RBP36.61■■■■□ 3.45
PABPN1-201ENST00000216727 STAP2Q9UGK3 403 aa36.61■■■■□ 3.45
PABPN1-201ENST00000216727 MX1P20591 662 aa36.61■■■■□ 3.45
PABPN1-201ENST00000216727 CWF19L2Q2TBE0 894 aaKnown RBP36.6■■■■□ 3.45
PABPN1-201ENST00000216727 LAMB4A4D0S4 1761 aa36.6■■■■□ 3.45
PABPN1-201ENST00000216727 SURF6O75683 361 aaKnown RBP36.59■■■■□ 3.45
PABPN1-201ENST00000216727 CASC1Q6TDU7 716 aa36.59■■■■□ 3.45
PABPN1-201ENST00000216727 RIC3Q7Z5B4 369 aa36.59■■■■□ 3.45
PABPN1-201ENST00000216727 MYL6BP14649 208 aa36.59■■■■□ 3.45
PABPN1-201ENST00000216727 XAGE3Q8WTP9 111 aa36.59■■■■□ 3.45
PABPN1-201ENST00000216727 HSP90AB4PQ58FF6 505 aa36.58■■■■□ 3.45
PABPN1-201ENST00000216727 RTL5Q5HYW3 569 aaPredicted RBP36.58■■■■□ 3.45
PABPN1-201ENST00000216727 AHDC1Q5TGY3 1603 aaPredicted RBP36.58■■■■□ 3.45
PABPN1-201ENST00000216727 AOX1Q06278 1338 aa36.58■■■■□ 3.45
PABPN1-201ENST00000216727 ROBO1Q9Y6N7 1651 aa36.57■■■■□ 3.45
PABPN1-201ENST00000216727 GRM8O00222 908 aa36.57■■■■□ 3.44
PABPN1-201ENST00000216727 COPS6Q7L5N1 327 aa36.57■■■■□ 3.44
PABPN1-201ENST00000216727 UBR2Q8IWV8 1755 aa36.56■■■■□ 3.44
PABPN1-201ENST00000216727 ERBB4Q15303 1308 aa36.56■■■■□ 3.44
PABPN1-201ENST00000216727 NEXNQ0ZGT2 675 aa36.55■■■■□ 3.44
PABPN1-201ENST00000216727 KIF1BPQ96EK5 621 aa36.55■■■■□ 3.44
PABPN1-201ENST00000216727 TUBGCP6Q96RT7 1819 aa36.55■■■■□ 3.44
PABPN1-201ENST00000216727 RHPN1Q8TCX5 695 aa36.54■■■■□ 3.44
PABPN1-201ENST00000216727 SNX21Q969T3 373 aa36.54■■■■□ 3.44
PABPN1-201ENST00000216727 KIF2CQ99661 725 aa36.54■■■■□ 3.44
PABPN1-201ENST00000216727 METTL22Q9BUU2 404 aaPredicted RBP36.54■■■■□ 3.44
PABPN1-201ENST00000216727 PAPPAQ13219 1627 aa36.54■■■■□ 3.44
PABPN1-201ENST00000216727 IGKV5-2P06315 115 aa36.54■■■■□ 3.44
PABPN1-201ENST00000216727 COL22A1Q8NFW1 1626 aaPredicted RBP36.53■■■■□ 3.44
PABPN1-201ENST00000216727 COL14A1Q05707 1796 aaKnown RBP36.53■■■■□ 3.44
PABPN1-201ENST00000216727 ANKRD13DQ6ZTN6 518 aa36.52■■■■□ 3.44
PABPN1-201ENST00000216727 BTG4Q9NY30 223 aa36.52■■■■□ 3.44
PABPN1-201ENST00000216727 DDX54Q8TDD1 881 aaKnown RBP36.51■■■■□ 3.44
PABPN1-201ENST00000216727 NEURL1BA8MQ27 555 aa36.5■■■■□ 3.43
PABPN1-201ENST00000216727 ANTXR1Q9H6X2 564 aa36.5■■■■□ 3.43
PABPN1-201ENST00000216727 KCPQ6ZWJ8 1503 aa36.5■■■■□ 3.43
PABPN1-201ENST00000216727 HSCBQ8IWL3 235 aa36.49■■■■□ 3.43
PABPN1-201ENST00000216727 IL1RAPL2Q9NP60 686 aa36.49■■■■□ 3.43
PABPN1-201ENST00000216727 TNS2Q63HR2 1409 aa36.48■■■■□ 3.43
PABPN1-201ENST00000216727 USP26Q9BXU7 913 aa36.48■■■■□ 3.43
PABPN1-201ENST00000216727 KAZALD1Q96I82 304 aa36.47■■■■□ 3.43
PABPN1-201ENST00000216727 SUCLG2Q96I99 432 aa36.47■■■■□ 3.43
PABPN1-201ENST00000216727 LTBP4Q8N2S1 1624 aa36.47■■■■□ 3.43
PABPN1-201ENST00000216727 GCKRQ14397 625 aa36.47■■■■□ 3.43
PABPN1-201ENST00000216727 NFKBIBQ15653 356 aa36.47■■■■□ 3.43
PABPN1-201ENST00000216727 TSHZ3Q63HK5 1081 aa36.47■■■■□ 3.43
PABPN1-201ENST00000216727 MYD88Q99836 296 aa36.46■■■■□ 3.43
PABPN1-201ENST00000216727 REC8O95072 547 aa36.45■■■■□ 3.43
PABPN1-201ENST00000216727 ERC2O15083 957 aa36.43■■■■□ 3.42
PABPN1-201ENST00000216727 ERC1Q8IUD2 1116 aa36.43■■■■□ 3.42
PABPN1-201ENST00000216727 SLKQ9H2G2 1235 aaPredicted RBP36.43■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms