RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 JAKMIP1Q96N16 626 aaKnown RBP12.26□□□□□ -0.45
NIPAL3-201ENST00000003912 NAPBQ9H115 298 aa12.26□□□□□ -0.45
NIPAL3-201ENST00000003912 ARHGEF10O15013 1369 aa12.26□□□□□ -0.45
NIPAL3-201ENST00000003912 TTF1Q15361 905 aaPredicted RBP12.26□□□□□ -0.45
NIPAL3-201ENST00000003912 SLAIN2Q9P270 581 aa12.26□□□□□ -0.45
NIPAL3-201ENST00000003912 A0A1W2PP64 1363 aa12.26□□□□□ -0.45
NIPAL3-201ENST00000003912 SLC39A6Q13433 755 aa12.26□□□□□ -0.45
NIPAL3-201ENST00000003912 RTCBQ9Y3I0 505 aaKnown RBP12.26□□□□□ -0.45
NIPAL3-201ENST00000003912 KINO60870 393 aaKnown RBP12.25□□□□□ -0.45
NIPAL3-201ENST00000003912 POLD1P28340 1107 aa12.25□□□□□ -0.45
NIPAL3-201ENST00000003912 SPTY2D1Q68D10 685 aaPredicted RBP12.25□□□□□ -0.45
NIPAL3-201ENST00000003912 NYXQ9GZU5 481 aa12.25□□□□□ -0.45
NIPAL3-201ENST00000003912 XAGE3Q8WTP9 111 aa12.25□□□□□ -0.45
NIPAL3-201ENST00000003912 NLRP3Q96P20 1036 aa12.25□□□□□ -0.45
NIPAL3-201ENST00000003912 CCDC8Q9H0W5 538 aaPredicted RBP12.25□□□□□ -0.45
NIPAL3-201ENST00000003912 TRIM27P14373 513 aa12.25□□□□□ -0.45
NIPAL3-201ENST00000003912 ORAI2Q96SN7 254 aa12.25□□□□□ -0.45
NIPAL3-201ENST00000003912 CHPF2Q9P2E5 772 aa12.25□□□□□ -0.45
NIPAL3-201ENST00000003912 A0A0U1RQG5 324 aaPredicted RBP12.25□□□□□ -0.45
NIPAL3-201ENST00000003912 MINDY4BA8MYZ0 360 aa12.25□□□□□ -0.45
NIPAL3-201ENST00000003912 MTHFSDQ2M296 383 aaKnown RBP12.25□□□□□ -0.45
NIPAL3-201ENST00000003912 TFCP2L1Q9NZI6 479 aa12.25□□□□□ -0.45
NIPAL3-201ENST00000003912 POLR3AO14802 1390 aaPredicted RBP12.25□□□□□ -0.45
NIPAL3-201ENST00000003912 SIRT1Q96EB6 747 aa12.24□□□□□ -0.45
NIPAL3-201ENST00000003912 PZPP20742 1482 aa12.24□□□□□ -0.45
NIPAL3-201ENST00000003912 COPS6Q7L5N1 327 aa12.24□□□□□ -0.45
NIPAL3-201ENST00000003912 TESK2Q96S53 571 aa12.24□□□□□ -0.45
NIPAL3-201ENST00000003912 TTLL12Q14166 644 aaPredicted RBP12.24□□□□□ -0.45
NIPAL3-201ENST00000003912 ANKRD18AQ8IVF6 992 aa12.24□□□□□ -0.45
NIPAL3-201ENST00000003912 MAP3K5Q99683 1374 aa12.24□□□□□ -0.45
NIPAL3-201ENST00000003912 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.24□□□□□ -0.45
NIPAL3-201ENST00000003912 NFATC2IPQ8NCF5 419 aa12.24□□□□□ -0.45
NIPAL3-201ENST00000003912 EYA1Q99502 592 aa12.24□□□□□ -0.45
NIPAL3-201ENST00000003912 ZNF444Q8N0Y2 327 aaPredicted RBP12.24□□□□□ -0.45
NIPAL3-201ENST00000003912 RNF41Q9H4P4 317 aaPredicted RBP12.24□□□□□ -0.45
NIPAL3-201ENST00000003912 MAP3K19Q56UN5 1328 aa12.24□□□□□ -0.45
NIPAL3-201ENST00000003912 SMARCA5O60264 1052 aaPredicted RBP12.23□□□□□ -0.45
NIPAL3-201ENST00000003912 BAG3O95817 575 aa12.23□□□□□ -0.45
NIPAL3-201ENST00000003912 ARHGAP45Q92619 1136 aa12.23□□□□□ -0.45
NIPAL3-201ENST00000003912 YEATS2Q9ULM3 1422 aa12.23□□□□□ -0.45
NIPAL3-201ENST00000003912 NIP7Q9Y221 180 aaKnown RBP eCLIP12.23□□□□□ -0.45
NIPAL3-201ENST00000003912 ALDH1L1O75891 902 aa12.23□□□□□ -0.45
NIPAL3-201ENST00000003912 CCDC70Q6NSX1 233 aa12.23□□□□□ -0.45
NIPAL3-201ENST00000003912 MAGI2Q86UL8 1455 aa12.23□□□□□ -0.45
NIPAL3-201ENST00000003912 ANXA1P04083 346 aa12.23□□□□□ -0.45
NIPAL3-201ENST00000003912 UQCRFS1P1P0C7P4 283 aa12.23□□□□□ -0.45
NIPAL3-201ENST00000003912 EDC4Q6P2E9 1401 aaKnown RBP12.23□□□□□ -0.45
NIPAL3-201ENST00000003912 LETM1O95202 739 aaPredicted RBP12.23□□□□□ -0.45
NIPAL3-201ENST00000003912 PDIA4P13667 645 aaKnown RBP12.23□□□□□ -0.45
NIPAL3-201ENST00000003912 DZIP3Q86Y13 1208 aaKnown RBP12.23□□□□□ -0.45
NIPAL3-201ENST00000003912 UTP14AQ9BVJ6 771 aaKnown RBP12.23□□□□□ -0.45
NIPAL3-201ENST00000003912 MBD3O95983 291 aa12.22□□□□□ -0.45
NIPAL3-201ENST00000003912 ZNF76P36508 570 aa12.22□□□□□ -0.45
NIPAL3-201ENST00000003912 TPTE2Q6XPS3 522 aa12.22□□□□□ -0.45
NIPAL3-201ENST00000003912 PARP3Q9Y6F1 533 aa12.22□□□□□ -0.45
NIPAL3-201ENST00000003912 KSR2Q6VAB6 950 aa12.22□□□□□ -0.45
NIPAL3-201ENST00000003912 ECHDC1Q9NTX5 307 aa12.22□□□□□ -0.45
NIPAL3-201ENST00000003912 SEC63Q9UGP8 760 aaKnown RBP12.22□□□□□ -0.45
NIPAL3-201ENST00000003912 ABCA8O94911 1581 aa12.22□□□□□ -0.45
NIPAL3-201ENST00000003912 PIP4K2AP48426 406 aaPredicted RBP12.22□□□□□ -0.45
NIPAL3-201ENST00000003912 LARP1BQ659C4 914 aaKnown RBP12.22□□□□□ -0.45
NIPAL3-201ENST00000003912 MYO5CQ9NQX4 1742 aa12.22□□□□□ -0.45
NIPAL3-201ENST00000003912 WDR33Q9C0J8 1336 aaKnown RBP12.22□□□□□ -0.45
NIPAL3-201ENST00000003912 MYO1BO43795 1136 aa12.22□□□□□ -0.45
NIPAL3-201ENST00000003912 IQCA1Q86XH1 822 aa12.22□□□□□ -0.45
NIPAL3-201ENST00000003912 PIK3C2GO75747 1445 aa12.21□□□□□ -0.45
NIPAL3-201ENST00000003912 CCDC196A0A1B0GTZ2 297 aa12.21□□□□□ -0.45
NIPAL3-201ENST00000003912 OFD1O75665 1012 aa12.21□□□□□ -0.45
NIPAL3-201ENST00000003912 GSTO1P78417 241 aa12.21□□□□□ -0.45
NIPAL3-201ENST00000003912 ARHGEF5Q12774 1597 aa12.21□□□□□ -0.45
NIPAL3-201ENST00000003912 K7ELQ4 463 aaPredicted RBP12.21□□□□□ -0.45
NIPAL3-201ENST00000003912 EVI5LQ96CN4 794 aa12.21□□□□□ -0.45
NIPAL3-201ENST00000003912 SBNO1A3KN83 1393 aa12.21□□□□□ -0.45
NIPAL3-201ENST00000003912 HMGB1P09429 215 aaKnown RBP12.21□□□□□ -0.46
NIPAL3-201ENST00000003912 CT47A1Q5JQC4 288 aaPredicted RBP12.21□□□□□ -0.46
NIPAL3-201ENST00000003912 GOLGA6L1Q8N7Z2 621 aa12.21□□□□□ -0.46
NIPAL3-201ENST00000003912 COL17A1Q9UMD9 1497 aaPredicted RBP12.2□□□□□ -0.46
NIPAL3-201ENST00000003912 RNMTO43148 476 aaKnown RBP12.2□□□□□ -0.46
NIPAL3-201ENST00000003912 ZNF213O14771 459 aa12.2□□□□□ -0.46
NIPAL3-201ENST00000003912 FAM13BQ9NYF5 915 aa12.2□□□□□ -0.46
NIPAL3-201ENST00000003912 CASTP20810 708 aaKnown RBP12.2□□□□□ -0.46
NIPAL3-201ENST00000003912 CEBPZQ03701 1054 aaKnown RBP12.2□□□□□ -0.46
NIPAL3-201ENST00000003912 CTCFLQ8NI51 663 aaPredicted RBP12.2□□□□□ -0.46
NIPAL3-201ENST00000003912 ZGPATQ8N5A5 531 aaKnown RBP12.2□□□□□ -0.46
NIPAL3-201ENST00000003912 MAGEC2Q9UBF1 373 aaPredicted RBP12.2□□□□□ -0.46
NIPAL3-201ENST00000003912 FIBPO43427 364 aa12.19□□□□□ -0.46
NIPAL3-201ENST00000003912 RANBP6O60518 1105 aaKnown RBP12.19□□□□□ -0.46
NIPAL3-201ENST00000003912 HLA-DOAP06340 250 aa12.19□□□□□ -0.46
NIPAL3-201ENST00000003912 PAXIP1Q6ZW49 1069 aaPredicted RBP12.19□□□□□ -0.46
NIPAL3-201ENST00000003912 HDAC9Q9UKV0 1011 aa12.19□□□□□ -0.46
NIPAL3-201ENST00000003912 LTKP29376 864 aa12.19□□□□□ -0.46
NIPAL3-201ENST00000003912 GSE1Q14687 1217 aa12.19□□□□□ -0.46
NIPAL3-201ENST00000003912 BMP2KQ9NSY1 1161 aaPredicted RBP12.19□□□□□ -0.46
NIPAL3-201ENST00000003912 STK32BQ9NY57 414 aa12.19□□□□□ -0.46
NIPAL3-201ENST00000003912 PARD3Q8TEW0 1356 aa12.19□□□□□ -0.46
NIPAL3-201ENST00000003912 PLEKHH1Q9ULM0 1364 aa12.19□□□□□ -0.46
NIPAL3-201ENST00000003912 GRM8O00222 908 aa12.19□□□□□ -0.46
NIPAL3-201ENST00000003912 KRT85P78386 507 aa12.19□□□□□ -0.46
NIPAL3-201ENST00000003912 PRPF40BQ6NWY9 871 aaKnown RBP12.19□□□□□ -0.46
NIPAL3-201ENST00000003912 SOS1Q07889 1333 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms