RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 MILR1Q7Z6M3 343 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 TICAM1Q8IUC6 712 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 FAM20CQ8IXL6 584 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 AFAP1L2Q8N4X5 818 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 CDYL2Q8N8U2 506 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 CHMP6Q96FZ7 201 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 AHCYL2Q96HN2 611 aaKnown RBP9□□□□□ -0.97
PHGDH-228ENST00000641847 MAGEB10Q96LZ2 347 aaPredicted RBP9□□□□□ -0.97
PHGDH-228ENST00000641847 ZNF317Q96PQ6 595 aaPredicted RBP9□□□□□ -0.97
PHGDH-228ENST00000641847 OR2A14Q96R47 310 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 KCNA7Q96RP8 456 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 NTMT1Q9BV86 223 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 ASPSCR1Q9BZE9 553 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 ILKAPQ9H0C8 392 aaPredicted RBP9□□□□□ -0.97
PHGDH-228ENST00000641847 EPB41L1Q9H4G0 881 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 GPN2Q9H9Y4 310 aaPredicted RBP9□□□□□ -0.97
PHGDH-228ENST00000641847 PELI2Q9HAT8 420 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 TNFRSF12AQ9NP84 129 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 MRPS30Q9NP92 439 aaKnown RBP9□□□□□ -0.97
PHGDH-228ENST00000641847 FGFR1OP2Q9NVK5 253 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 PNPOQ9NVS9 261 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 ZDHHC2Q9UIJ5 367 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 ZNF225Q9UK10 706 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 POMT2Q9UKY4 750 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 RNF11Q9Y3C5 154 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 FIS1Q9Y3D6 152 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 KCNE1BA0A087WTH5 132 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 IGKV1-8A0A0C4DH67 115 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 TTLL8A6PVC2 850 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 MKRN2OSH3BPM6 223 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 HGSO14964 777 aaPredicted RBP8.99□□□□□ -0.97
PHGDH-228ENST00000641847 B4GAT1O43505 415 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 UGDHO60701 494 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 CLDN9O95484 217 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 ENO1P06733 434 aaKnown RBP8.99□□□□□ -0.97
PHGDH-228ENST00000641847 CAPN1P07384 714 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 C1GALT1C1LP0DN25 315 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 PRKAR1AP10644 381 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 KITP10721 976 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 CD22P20273 847 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 GNLYP22749 145 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 HMOX2P30519 316 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 CSF2RBP32927 897 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 DCTP40126 519 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 RPL14P50914 215 aaKnown RBP8.99□□□□□ -0.97
PHGDH-228ENST00000641847 CCR8P51685 355 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 SEC24CP53992 1094 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 FOXA1P55317 472 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 GFERP55789 205 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 REEP5Q00765 189 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 DOC2AQ14183 400 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 TBCCQ15814 346 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 TUBB8Q3ZCM7 444 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 TCHHL1Q5QJ38 904 aaPredicted RBP8.99□□□□□ -0.97
PHGDH-228ENST00000641847 ZNF787Q6DD87 383 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 CLEC6AQ6EIG7 209 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 GRHL2Q6ISB3 625 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 FAM92BQ6ZTR7 304 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 KIRREL3Q8IZU9 778 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 L3MBTL4Q8NA19 623 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 ABHD11Q8NFV4 315 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 NCSTNQ92542 709 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 WDR34Q96EX3 536 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 PTCD3Q96EY7 689 aaKnown RBP8.99□□□□□ -0.97
PHGDH-228ENST00000641847 SLC45A3Q96JT2 553 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 PPM1MQ96MI6 270 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 TGM7Q96PF1 710 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 DPH7Q9BTV6 452 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 EFCAB11Q9BUY7 163 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 SLC29A3Q9BZD2 475 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 RAB33BQ9H082 229 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 FAM107BQ9H098 131 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 NSRP1Q9H0G5 558 aaKnown RBP8.99□□□□□ -0.97
PHGDH-228ENST00000641847 EHD1Q9H4M9 534 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 HAO1Q9UJM8 370 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.99□□□□□ -0.97
PHGDH-228ENST00000641847 KLHL20Q9Y2M5 609 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 PCDHGA3Q9Y5H0 932 aa8.99□□□□□ -0.97
PHGDH-228ENST00000641847 MN1Q10571 1320 aaPredicted RBP8.99□□□□□ -0.97
PHGDH-228ENST00000641847 SNRNP200O75643 2136 aaKnown RBP8.98□□□□□ -0.97
PHGDH-228ENST00000641847 NF1P21359 2839 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 GMNCA6NCL1 334 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 H7BY64 318 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 FFAR3O14843 346 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 GPR42O15529 346 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 NRP2O60462 931 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 SKAP2O75563 359 aaPredicted RBP8.98□□□□□ -0.97
PHGDH-228ENST00000641847 WFS1O76024 890 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 FKBP9O95302 570 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 CPNE6O95741 557 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 CHEK2O96017 543 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 UROSP10746 265 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 PVRP15151 417 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 MAGP20916 626 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 DRD4P21917 467 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 CDH3P22223 829 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 HRH2P25021 359 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 CD1CP29017 333 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 SERPINB3P29508 390 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 HNF4AP41235 474 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms