RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 MED13Q9UHV7 2174 aa25.32■■□□□ 1.64
VEGFA-231ENST00000640499 C4orf51C9J302 202 aa25.32■■□□□ 1.64
VEGFA-231ENST00000640499 E2F3O00716 465 aa25.32■■□□□ 1.64
VEGFA-231ENST00000640499 H2AFYO75367 372 aaKnown RBP25.32■■□□□ 1.64
VEGFA-231ENST00000640499 NUDT17P0C025 328 aa25.32■■□□□ 1.64
VEGFA-231ENST00000640499 FAM87AP0C7U9 286 aa25.32■■□□□ 1.64
VEGFA-231ENST00000640499 SMIM10L1P0DMW3 83 aa25.32■■□□□ 1.64
VEGFA-231ENST00000640499 IL1RNP18510 177 aa25.32■■□□□ 1.64
VEGFA-231ENST00000640499 FBLP22087 321 aaKnown RBP25.32■■□□□ 1.64
VEGFA-231ENST00000640499 EFNA3P52797 238 aa25.32■■□□□ 1.64
VEGFA-231ENST00000640499 CHIT1Q13231 466 aa25.32■■□□□ 1.64
VEGFA-231ENST00000640499 LY6DQ14210 128 aa25.32■■□□□ 1.64
VEGFA-231ENST00000640499 SSPNQ14714 243 aa25.32■■□□□ 1.64
VEGFA-231ENST00000640499 TBCCQ15814 346 aa25.32■■□□□ 1.64
VEGFA-231ENST00000640499 NDUFA9Q16795 377 aa25.32■■□□□ 1.64
VEGFA-231ENST00000640499 XKR6Q5GH73 641 aa25.32■■□□□ 1.64
VEGFA-231ENST00000640499 TMIGD1Q6UXZ0 262 aa25.32■■□□□ 1.64
VEGFA-231ENST00000640499 PPP1R32Q7Z5V6 425 aa25.32■■□□□ 1.64
VEGFA-231ENST00000640499 TEX9Q8N6V9 391 aa25.32■■□□□ 1.64
VEGFA-231ENST00000640499 ACMSDQ8TDX5 336 aa25.32■■□□□ 1.64
VEGFA-231ENST00000640499 PTCD3Q96EY7 689 aaKnown RBP25.32■■□□□ 1.64
VEGFA-231ENST00000640499 SMIM10Q96HG1 83 aa25.32■■□□□ 1.64
VEGFA-231ENST00000640499 MESP1Q9BRJ9 268 aa25.32■■□□□ 1.64
VEGFA-231ENST00000640499 MRPL46Q9H2W6 279 aaKnown RBP25.32■■□□□ 1.64
VEGFA-231ENST00000640499 SOX17Q9H6I2 414 aaPredicted RBP25.32■■□□□ 1.64
VEGFA-231ENST00000640499 SLC22A7Q9Y694 548 aa25.32■■□□□ 1.64
VEGFA-231ENST00000640499 SMG1Q96Q15 3661 aaKnown RBP25.31■■□□□ 1.64
VEGFA-231ENST00000640499 SMIM23A6NLE4 172 aa25.31■■□□□ 1.64
VEGFA-231ENST00000640499 SGK494L7N484 410 aa25.31■■□□□ 1.64
VEGFA-231ENST00000640499 NSA2O95478 260 aaKnown RBP25.31■■□□□ 1.64
VEGFA-231ENST00000640499 CD63P08962 238 aa25.31■■□□□ 1.64
VEGFA-231ENST00000640499 SLC35G6P0C7Q6 338 aa25.31■■□□□ 1.64
VEGFA-231ENST00000640499 FOLR3P41439 243 aa25.31■■□□□ 1.64
VEGFA-231ENST00000640499 TBC1D19Q8N5T2 526 aa25.31■■□□□ 1.64
VEGFA-231ENST00000640499 UTP15Q8TED0 518 aaKnown RBP25.31■■□□□ 1.64
VEGFA-231ENST00000640499 THAP4Q8WY91 577 aa25.31■■□□□ 1.64
VEGFA-231ENST00000640499 PHF21BQ96EK2 531 aa25.31■■□□□ 1.64
VEGFA-231ENST00000640499 ZNF282Q9UDV7 671 aaPredicted RBP25.31■■□□□ 1.64
VEGFA-231ENST00000640499 H0YIG0 161 aa25.3■■□□□ 1.64
VEGFA-231ENST00000640499 SERPIND1P05546 499 aa25.3■■□□□ 1.64
VEGFA-231ENST00000640499 ZGLP1P0C6A0 271 aa25.3■■□□□ 1.64
VEGFA-231ENST00000640499 CXCR2P25025 360 aa25.3■■□□□ 1.64
VEGFA-231ENST00000640499 OTX2P32243 289 aa25.3■■□□□ 1.64
VEGFA-231ENST00000640499 IRF8Q02556 426 aa25.3■■□□□ 1.64
VEGFA-231ENST00000640499 CPZQ66K79 652 aa25.3■■□□□ 1.64
VEGFA-231ENST00000640499 TRPV3Q8NET8 790 aa25.3■■□□□ 1.64
VEGFA-231ENST00000640499 TRIM55Q9BYV6 548 aa25.3■■□□□ 1.64
VEGFA-231ENST00000640499 PITHD1Q9GZP4 211 aaPredicted RBP25.3■■□□□ 1.64
VEGFA-231ENST00000640499 PPCSQ9HAB8 311 aa25.3■■□□□ 1.64
VEGFA-231ENST00000640499 TRPC4Q9UBN4 977 aa25.3■■□□□ 1.64
VEGFA-231ENST00000640499 EMCNQ9ULC0 261 aa25.3■■□□□ 1.64
VEGFA-231ENST00000640499 KLHL18O94889 574 aa25.29■■□□□ 1.64
VEGFA-231ENST00000640499 SERPINA6P08185 405 aa25.29■■□□□ 1.64
VEGFA-231ENST00000640499 EPB42P16452 691 aa25.29■■□□□ 1.64
VEGFA-231ENST00000640499 EEF1DP29692 281 aaKnown RBP25.29■■□□□ 1.64
VEGFA-231ENST00000640499 CCR10P46092 362 aa25.29■■□□□ 1.64
VEGFA-231ENST00000640499 POLE2P56282 527 aa25.29■■□□□ 1.64
VEGFA-231ENST00000640499 KLC1Q07866 573 aa25.29■■□□□ 1.64
VEGFA-231ENST00000640499 GOLGA7Q7Z5G4 137 aa25.29■■□□□ 1.64
VEGFA-231ENST00000640499 ZC3H7AQ8IWR0 971 aaKnown RBP25.29■■□□□ 1.64
VEGFA-231ENST00000640499 PRSS58Q8IYP2 241 aa25.29■■□□□ 1.64
VEGFA-231ENST00000640499 KRT78Q8N1N4 520 aa25.29■■□□□ 1.64
VEGFA-231ENST00000640499 MREGQ8N565 214 aa25.29■■□□□ 1.64
VEGFA-231ENST00000640499 LSM14AQ8ND56 463 aaKnown RBP25.29■■□□□ 1.64
VEGFA-231ENST00000640499 APOBEC4Q8WW27 367 aaKnown RBP25.29■■□□□ 1.64
VEGFA-231ENST00000640499 EFCAB11Q9BUY7 163 aa25.29■■□□□ 1.64
VEGFA-231ENST00000640499 RHBGQ9H310 441 aa25.29■■□□□ 1.64
VEGFA-231ENST00000640499 MAN2B2Q9Y2E5 1009 aa25.29■■□□□ 1.64
VEGFA-231ENST00000640499 NAALAD2Q9Y3Q0 740 aa25.29■■□□□ 1.64
VEGFA-231ENST00000640499 MAP4K5Q9Y4K4 846 aa25.29■■□□□ 1.64
VEGFA-231ENST00000640499 A8MT66 165 aa25.28■■□□□ 1.64
VEGFA-231ENST00000640499 STX16-NPEPL1H3BU86 382 aa25.28■■□□□ 1.64
VEGFA-231ENST00000640499 STX16O14662 325 aa25.28■■□□□ 1.64
VEGFA-231ENST00000640499 GALR3O60755 368 aaPredicted RBP25.28■■□□□ 1.64
VEGFA-231ENST00000640499 ZNF888P0CJ79 500 aaPredicted RBP25.28■■□□□ 1.64
VEGFA-231ENST00000640499 HNRNPH1P31943 449 aaKnown RBP25.28■■□□□ 1.64
VEGFA-231ENST00000640499 HNF4AP41235 474 aa25.28■■□□□ 1.64
VEGFA-231ENST00000640499 AVPR1BP47901 424 aa25.28■■□□□ 1.64
VEGFA-231ENST00000640499 CHAF1BQ13112 559 aa25.28■■□□□ 1.64
VEGFA-231ENST00000640499 ATP1A4Q13733 1029 aa25.28■■□□□ 1.64
VEGFA-231ENST00000640499 GTF2H2Q13888 395 aa25.28■■□□□ 1.64
VEGFA-231ENST00000640499 GTF2H2CQ6P1K8 395 aa25.28■■□□□ 1.64
VEGFA-231ENST00000640499 MRGPREQ86SM8 312 aa25.28■■□□□ 1.64
VEGFA-231ENST00000640499 LCA5Q86VQ0 697 aa25.28■■□□□ 1.64
VEGFA-231ENST00000640499 OR5T3Q8NGG3 340 aa25.28■■□□□ 1.64
VEGFA-231ENST00000640499 SLC39A7Q92504 469 aa25.28■■□□□ 1.64
VEGFA-231ENST00000640499 MIEF2Q96C03 454 aa25.28■■□□□ 1.64
VEGFA-231ENST00000640499 NSUN5Q96P11 429 aaKnown RBP25.28■■□□□ 1.64
VEGFA-231ENST00000640499 TGIF2Q9GZN2 237 aa25.28■■□□□ 1.64
VEGFA-231ENST00000640499 ANKHQ9HCJ1 492 aa25.28■■□□□ 1.64
VEGFA-231ENST00000640499 ZBTB26Q9HCK0 441 aa25.28■■□□□ 1.64
VEGFA-231ENST00000640499 TNPO3Q9Y5L0 923 aaKnown RBP25.28■■□□□ 1.64
VEGFA-231ENST00000640499 ZNF860A6NHJ4 632 aa25.27■■□□□ 1.64
VEGFA-231ENST00000640499 MASP2O00187 686 aa25.27■■□□□ 1.64
VEGFA-231ENST00000640499 OR7A17O14581 309 aa25.27■■□□□ 1.64
VEGFA-231ENST00000640499 CDH16O75309 829 aa25.27■■□□□ 1.64
VEGFA-231ENST00000640499 RDH16O75452 317 aa25.27■■□□□ 1.64
VEGFA-231ENST00000640499 JRKO75564 520 aa25.27■■□□□ 1.64
VEGFA-231ENST00000640499 DNAJB5O75953 348 aa25.27■■□□□ 1.64
VEGFA-231ENST00000640499 ALOX12P18054 663 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms