RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 RBBP8Q99708 897 aa23.82■■□□□ 1.4
VEGFA-230ENST00000640482 DERL2Q9GZP9 239 aa23.82■■□□□ 1.4
VEGFA-230ENST00000640482 AGPAT4Q9NRZ5 378 aa23.82■■□□□ 1.4
VEGFA-230ENST00000640482 DYTNA2CJ06 578 aa23.81■■□□□ 1.4
VEGFA-230ENST00000640482 FAM159BA6NKW6 160 aa23.81■■□□□ 1.4
VEGFA-230ENST00000640482 ALOX12P18054 663 aa23.81■■□□□ 1.4
VEGFA-230ENST00000640482 SOX11P35716 441 aa23.81■■□□□ 1.4
VEGFA-230ENST00000640482 GP5P40197 560 aa23.81■■□□□ 1.4
VEGFA-230ENST00000640482 AGTR2P50052 363 aa23.81■■□□□ 1.4
VEGFA-230ENST00000640482 EFNA3P52797 238 aa23.81■■□□□ 1.4
VEGFA-230ENST00000640482 CDC16Q13042 620 aa23.81■■□□□ 1.4
VEGFA-230ENST00000640482 NR6A1Q15406 480 aa23.81■■□□□ 1.4
VEGFA-230ENST00000640482 NXPE4Q6UWF7 544 aa23.81■■□□□ 1.4
VEGFA-230ENST00000640482 ABHD13Q7L211 337 aa23.81■■□□□ 1.4
VEGFA-230ENST00000640482 ZNF572Q7Z3I7 529 aaPredicted RBP23.81■■□□□ 1.4
VEGFA-230ENST00000640482 CPEB2Q7Z5Q1 589 aaKnown RBP23.81■■□□□ 1.4
VEGFA-230ENST00000640482 AFAP1L2Q8N4X5 818 aa23.81■■□□□ 1.4
VEGFA-230ENST00000640482 SIRT6Q8N6T7 355 aa23.81■■□□□ 1.4
VEGFA-230ENST00000640482 PSMF1Q92530 271 aa23.81■■□□□ 1.4
VEGFA-230ENST00000640482 MOCOSQ96EN8 888 aa23.81■■□□□ 1.4
VEGFA-230ENST00000640482 OR1F2PQ96R84 312 aa23.81■■□□□ 1.4
VEGFA-230ENST00000640482 GPR22Q99680 433 aa23.81■■□□□ 1.4
VEGFA-230ENST00000640482 SPNS1Q9H2V7 528 aa23.81■■□□□ 1.4
VEGFA-230ENST00000640482 SHANK1Q9Y566 2161 aa23.81■■□□□ 1.4
VEGFA-230ENST00000640482 URADA6NGE7 173 aa23.8■■□□□ 1.4
VEGFA-230ENST00000640482 WISP3O95389 354 aaPredicted RBP23.8■■□□□ 1.4
VEGFA-230ENST00000640482 STMN1P16949 149 aa23.8■■□□□ 1.4
VEGFA-230ENST00000640482 ARG2P78540 354 aa23.8■■□□□ 1.4
VEGFA-230ENST00000640482 CCDC25Q86WR0 208 aa23.8■■□□□ 1.4
VEGFA-230ENST00000640482 CTAGE3PQ8IX95 158 aa23.8■■□□□ 1.4
VEGFA-230ENST00000640482 TRPV3Q8NET8 790 aa23.8■■□□□ 1.4
VEGFA-230ENST00000640482 IMMP1LQ96LU5 166 aa23.8■■□□□ 1.4
VEGFA-230ENST00000640482 CAB39LQ9H9S4 337 aa23.8■■□□□ 1.4
VEGFA-230ENST00000640482 DOCK10Q96BY6 2186 aa23.79■■□□□ 1.4
VEGFA-230ENST00000640482 ZNF860A6NHJ4 632 aa23.79■■□□□ 1.4
VEGFA-230ENST00000640482 GALR3O60755 368 aaPredicted RBP23.79■■□□□ 1.4
VEGFA-230ENST00000640482 WDR47O94967 919 aa23.79■■□□□ 1.4
VEGFA-230ENST00000640482 CBX6O95503 412 aa23.79■■□□□ 1.4
VEGFA-230ENST00000640482 CELA2AP08217 269 aa23.79■■□□□ 1.4
VEGFA-230ENST00000640482 CCDC166P0CW27 439 aa23.79■■□□□ 1.4
VEGFA-230ENST00000640482 GPX6P59796 221 aa23.79■■□□□ 1.4
VEGFA-230ENST00000640482 CKAP4Q07065 602 aaKnown RBP23.79■■□□□ 1.4
VEGFA-230ENST00000640482 RBBP5Q15291 538 aaKnown RBP23.79■■□□□ 1.4
VEGFA-230ENST00000640482 TGFBIQ15582 683 aa23.79■■□□□ 1.4
VEGFA-230ENST00000640482 EIF2S3LQ2VIR3 472 aaKnown RBP23.79■■□□□ 1.4
VEGFA-230ENST00000640482 DEFB134Q4QY38 66 aa23.79■■□□□ 1.4
VEGFA-230ENST00000640482 LANCL3Q6ZV70 420 aa23.79■■□□□ 1.4
VEGFA-230ENST00000640482 KLHDC8AQ8IYD2 350 aa23.79■■□□□ 1.4
VEGFA-230ENST00000640482 TCAIMQ8N3R3 496 aa23.79■■□□□ 1.4
VEGFA-230ENST00000640482 FBXO25Q8TCJ0 367 aa23.79■■□□□ 1.4
VEGFA-230ENST00000640482 RHBDF1Q96CC6 855 aa23.79■■□□□ 1.4
VEGFA-230ENST00000640482 PEX11GQ96HA9 241 aa23.79■■□□□ 1.4
VEGFA-230ENST00000640482 BARD1Q99728 777 aaKnown RBP23.79■■□□□ 1.4
VEGFA-230ENST00000640482 PHGDHO43175 533 aaKnown RBP23.78■■□□□ 1.4
VEGFA-230ENST00000640482 SEC24DO94855 1032 aaPredicted RBP23.78■■□□□ 1.4
VEGFA-230ENST00000640482 ZNF888P0CJ79 500 aaPredicted RBP23.78■■□□□ 1.4
VEGFA-230ENST00000640482 ITGAMP11215 1152 aa23.78■■□□□ 1.4
VEGFA-230ENST00000640482 GNAZP19086 355 aa23.78■■□□□ 1.4
VEGFA-230ENST00000640482 SPRP35270 261 aaPredicted RBP23.78■■□□□ 1.4
VEGFA-230ENST00000640482 SLC6A12P48065 614 aa23.78■■□□□ 1.4
VEGFA-230ENST00000640482 ELOAQ14241 798 aaKnown RBP23.78■■□□□ 1.4
VEGFA-230ENST00000640482 GRTP1Q5TC63 336 aa23.78■■□□□ 1.4
VEGFA-230ENST00000640482 ANKRD37Q7Z713 158 aa23.78■■□□□ 1.4
VEGFA-230ENST00000640482 SHISA5Q8N114 240 aa23.78■■□□□ 1.4
VEGFA-230ENST00000640482 OR5T3Q8NGG3 340 aa23.78■■□□□ 1.4
VEGFA-230ENST00000640482 PRR7Q8TB68 274 aa23.78■■□□□ 1.4
VEGFA-230ENST00000640482 UNKQ9C0B0 810 aaKnown RBP23.78■■□□□ 1.4
VEGFA-230ENST00000640482 TEKT2Q9UIF3 430 aa23.78■■□□□ 1.4
VEGFA-230ENST00000640482 NTNG1Q9Y2I2 539 aa23.78■■□□□ 1.4
VEGFA-230ENST00000640482 BLACEA4D250 179 aa23.77■■□□□ 1.4
VEGFA-230ENST00000640482 NCF1BA6NI72 391 aaPredicted RBP23.77■■□□□ 1.4
VEGFA-230ENST00000640482 NCF1CA8MVU1 366 aaPredicted RBP23.77■■□□□ 1.4
VEGFA-230ENST00000640482 H2AFYO75367 372 aaKnown RBP23.77■■□□□ 1.4
VEGFA-230ENST00000640482 NCF1P14598 390 aaPredicted RBP23.77■■□□□ 1.4
VEGFA-230ENST00000640482 JAK1P23458 1154 aa23.77■■□□□ 1.4
VEGFA-230ENST00000640482 STX2P32856 288 aa23.77■■□□□ 1.4
VEGFA-230ENST00000640482 MAGEA4P43358 317 aa23.77■■□□□ 1.4
VEGFA-230ENST00000640482 ATP6V0D1P61421 351 aa23.77■■□□□ 1.4
VEGFA-230ENST00000640482 BTBD16Q32M84 506 aa23.77■■□□□ 1.4
VEGFA-230ENST00000640482 PLAG1Q6DJT9 500 aa23.77■■□□□ 1.4
VEGFA-230ENST00000640482 RPUSD3Q6P087 351 aaKnown RBP23.77■■□□□ 1.4
VEGFA-230ENST00000640482 GPSM1Q86YR5 675 aa23.77■■□□□ 1.4
VEGFA-230ENST00000640482 ANKRD53Q8N9V6 530 aa23.77■■□□□ 1.4
VEGFA-230ENST00000640482 PLPP5Q8NEB5 264 aa23.77■■□□□ 1.4
VEGFA-230ENST00000640482 CATSPER1Q8NEC5 780 aa23.77■■□□□ 1.4
VEGFA-230ENST00000640482 UTP15Q8TED0 518 aaKnown RBP23.77■■□□□ 1.4
VEGFA-230ENST00000640482 HAS2Q92819 552 aa23.77■■□□□ 1.4
VEGFA-230ENST00000640482 TBC1D20Q96BZ9 403 aa23.77■■□□□ 1.4
VEGFA-230ENST00000640482 CAPS2Q9BXY5 557 aa23.77■■□□□ 1.4
VEGFA-230ENST00000640482 RBCK1Q9BYM8 510 aa23.77■■□□□ 1.4
VEGFA-230ENST00000640482 SLC6A16Q9GZN6 736 aa23.77■■□□□ 1.4
VEGFA-230ENST00000640482 CNOT10Q9H9A5 744 aaKnown RBP23.77■■□□□ 1.4
VEGFA-230ENST00000640482 CLK4Q9HAZ1 481 aaKnown RBP23.77■■□□□ 1.4
VEGFA-230ENST00000640482 LRRC4CQ9HCJ2 640 aa23.77■■□□□ 1.4
VEGFA-230ENST00000640482 FLNCQ14315 2725 aa23.77■■□□□ 1.4
VEGFA-230ENST00000640482 TRAV17A0A0B4J275 112 aa23.76■■□□□ 1.39
VEGFA-230ENST00000640482 IGHV3-20A0A0C4DH32 117 aa23.76■■□□□ 1.39
VEGFA-230ENST00000640482 ANKUB1A6NFN9 424 aa23.76■■□□□ 1.39
VEGFA-230ENST00000640482 CDC123O75794 336 aaPredicted RBP23.76■■□□□ 1.39
VEGFA-230ENST00000640482 FHP07954 510 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms