RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 PRSS58Q8IYP2 241 aa21.15■□□□□ 0.98
SF1-220ENST00000626028 KRT78Q8N1N4 520 aa21.15■□□□□ 0.98
SF1-220ENST00000626028 SPATA6LQ8N4H0 392 aa21.15■□□□□ 0.98
SF1-220ENST00000626028 ZNF740Q8NDX6 193 aa21.15■□□□□ 0.98
SF1-220ENST00000626028 OR51Q1Q8NH59 317 aa21.15■□□□□ 0.98
SF1-220ENST00000626028 METTL21AQ8WXB1 218 aa21.15■□□□□ 0.98
SF1-220ENST00000626028 AGAP4Q96P64 663 aa21.15■□□□□ 0.98
SF1-220ENST00000626028 SLC6A16Q9GZN6 736 aa21.15■□□□□ 0.98
SF1-220ENST00000626028 DNAJC11Q9NVH1 559 aa21.15■□□□□ 0.98
SF1-220ENST00000626028 RIC8BQ9NVN3 520 aa21.15■□□□□ 0.98
SF1-220ENST00000626028 CD274Q9NZQ7 290 aa21.15■□□□□ 0.98
SF1-220ENST00000626028 MKL2Q9ULH7 1088 aa21.15■□□□□ 0.98
SF1-220ENST00000626028 NAALAD2Q9Y3Q0 740 aa21.15■□□□□ 0.98
SF1-220ENST00000626028 SHANK1Q9Y566 2161 aa21.14■□□□□ 0.98
SF1-220ENST00000626028 NSG1A0A0A6YYJ2 146 aa21.14■□□□□ 0.97
SF1-220ENST00000626028 NCF1BA6NI72 391 aaPredicted RBP21.14■□□□□ 0.97
SF1-220ENST00000626028 SYCE1LA8MT33 242 aa21.14■□□□□ 0.97
SF1-220ENST00000626028 NCF1CA8MVU1 366 aaPredicted RBP21.14■□□□□ 0.97
SF1-220ENST00000626028 GALR3O60755 368 aaPredicted RBP21.14■□□□□ 0.97
SF1-220ENST00000626028 SORBS2O94875 1100 aaKnown RBP21.14■□□□□ 0.97
SF1-220ENST00000626028 KLHL18O94889 574 aa21.14■□□□□ 0.97
SF1-220ENST00000626028 NCF1P14598 390 aaPredicted RBP21.14■□□□□ 0.97
SF1-220ENST00000626028 ALOX12P18054 663 aa21.14■□□□□ 0.97
SF1-220ENST00000626028 FAM83EQ2M2I3 478 aa21.14■□□□□ 0.97
SF1-220ENST00000626028 IGFL2Q6UWQ7 119 aa21.14■□□□□ 0.97
SF1-220ENST00000626028 PRSS41Q7RTY9 318 aa21.14■□□□□ 0.97
SF1-220ENST00000626028 CNPY4Q8N129 248 aa21.14■□□□□ 0.97
SF1-220ENST00000626028 RBMXL3Q8N7X1 1067 aaKnown RBP21.14■□□□□ 0.97
SF1-220ENST00000626028 IFT81Q8WYA0 676 aa21.14■□□□□ 0.97
SF1-220ENST00000626028 WDR34Q96EX3 536 aa21.14■□□□□ 0.97
SF1-220ENST00000626028 MACROD1Q9BQ69 325 aa21.14■□□□□ 0.97
SF1-220ENST00000626028 CDC42EP4Q9H3Q1 356 aaKnown RBP21.14■□□□□ 0.97
SF1-220ENST00000626028 NUDT4Q9NZJ9 180 aa21.14■□□□□ 0.97
SF1-220ENST00000626028 C19orf25Q9UFG5 118 aaPredicted RBP21.14■□□□□ 0.97
SF1-220ENST00000626028 B3GNT3Q9Y2A9 372 aa21.14■□□□□ 0.97
SF1-220ENST00000626028 IGHV1-45A0A0A0MS14 117 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 SGK494L7N484 410 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 CLGNO14967 610 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 TAPBPO15533 448 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 KERAO60938 352 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 ALOX12BO75342 701 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 C8orf89P0DMQ9 161 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 COX6A1P12074 109 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 TFEBP19484 476 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 GDF5P43026 501 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 XCR1P46094 333 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 CD97P48960 835 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 AGTR2P50052 363 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 MAT1AQ00266 395 aaKnown RBP21.13■□□□□ 0.97
SF1-220ENST00000626028 EFTUD2Q15029 972 aaKnown RBP eCLIP21.13■□□□□ 0.973e-7■■■■■ 44.5
SF1-220ENST00000626028 SYT16Q17RD7 645 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 NADK2Q4G0N4 442 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 TMIGD1Q6UXZ0 262 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 CMC1Q7Z7K0 106 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 PDSS2Q86YH6 399 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 KBTBD2Q8IY47 623 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 ZADH2Q8N4Q0 377 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 ANKRD53Q8N9V6 530 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 ZCCHC10Q8TBK6 192 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 ATOH8Q96SQ7 321 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 TMEM79Q9BSE2 394 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 TRIM4Q9C037 500 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 VN1R1Q9GZP7 353 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 ZNF700Q9H0M5 742 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 SPNS1Q9H2V7 528 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 IKBKGQ9Y6K9 419 aa21.13■□□□□ 0.97
SF1-220ENST00000626028 STATHP02808 62 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 SMIM10L1P0DMW3 83 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 CNTFP26441 200 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 ECHS1P30084 290 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 SERPINB8P50452 374 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 SERPINB9P50453 376 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 STXBP1P61764 594 aaKnown RBP21.12■□□□□ 0.97
SF1-220ENST00000626028 PCDH1Q08174 1060 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 LAPTM5Q13571 262 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 RAPSNQ13702 412 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 E2F2Q14209 437 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 ACAP2Q15057 778 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 RBBP5Q15291 538 aaKnown RBP21.12■□□□□ 0.97
SF1-220ENST00000626028 TBCCQ15814 346 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 PDK4Q16654 411 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 MROH9Q5TGP6 573 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 SLC6A19Q695T7 634 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 TAOK1Q7L7X3 1001 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 LRRC70Q7Z2Q7 622 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 IFT20Q8IY31 132 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 CREB3L4Q8TEY5 395 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 PPP4R1Q8TF05 950 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 SLC44A1Q8WWI5 657 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 MIB2Q96AX9 1013 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 MOCOSQ96EN8 888 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 PTCD3Q96EY7 689 aaKnown RBP21.12■□□□□ 0.97
SF1-220ENST00000626028 SMIM10Q96HG1 83 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 LMF1Q96S06 567 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 TUBB6Q9BUF5 446 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 EFCAB11Q9BUY7 163 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 CD244Q9BZW8 370 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 ALG9Q9H6U8 611 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 ZNF160Q9HCG1 818 aa21.12■□□□□ 0.97
SF1-220ENST00000626028 IGSF5Q9NSI5 407 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms