RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 CFAP20Q9Y6A4 193 aaKnown RBP18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 COMMD3-BMI1R4GMX3 469 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 SEC24DO94855 1032 aaPredicted RBP18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 KLHL18O94889 574 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 BMP10O95393 424 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 PAK4O96013 591 aaPredicted RBP18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 GBAP04062 536 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 FURINP09958 794 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 PTX3P26022 381 aaPredicted RBP18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 RPL10P27635 214 aaKnown RBP18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 TIE1P35590 1138 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 RPL3P39023 403 aaKnown RBP18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 DYNC1I2Q13409 638 aaKnown RBP18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 PDE7AQ13946 482 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 ZNF385BQ569K4 471 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 VN1R5Q7Z5H4 357 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 C17orf64Q86WR6 236 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 SYNPOQ8N3V7 929 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 OR5K1Q8NHB7 308 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 GOT1L1Q8NHS2 421 aaPredicted RBP18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 ZFP28Q8NHY6 868 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 PNPT1Q8TCS8 783 aaKnown RBP18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 C16orf78Q8WTQ4 265 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 RBM4BQ9BQ04 359 aaKnown RBP18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 DPH2Q9BQC3 489 aaPredicted RBP18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 RBM4Q9BWF3 364 aaKnown RBP18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 TRIM4Q9C037 500 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 CHST8Q9H2A9 424 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 TRIT1Q9H3H1 467 aaKnown RBP18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 ZNF282Q9UDV7 671 aaPredicted RBP18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 RPS6KA6Q9UK32 745 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 ACSL5Q9ULC5 683 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 FZD4Q9ULV1 537 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 VPS4AQ9UN37 437 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 DMTF1Q9Y222 760 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 A0A087WXM4 84 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 ZNF682O95780 498 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 ABCB1P08183 1280 aaPredicted RBP18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 SLC35G4P0C7Q5 338 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 DCTP40126 519 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 RPS6KA3P51812 740 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 SEC13P55735 322 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 DMPKQ09013 629 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 ADAM15Q13444 863 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 GAB1Q13480 694 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 ZIK1Q3SY52 487 aaPredicted RBP18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 FAM71E1Q6IPT2 247 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 ZDHHC21Q8IVQ6 265 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 PJA1Q8NG27 643 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 OR4A15Q8NGL6 344 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 OR10Q1Q8NGQ4 319 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 ACAT2Q9BWD1 397 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 YTHDF1Q9BYJ9 559 aaKnown RBP18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 PELI2Q9HAT8 420 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 PHPT1Q9NRX4 125 aaPredicted RBP18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 SPATA7Q9P0W8 599 aa18.92■□□□□ 0.62
PCDHB11-202ENST00000624887 CLCNKAP51800 687 aa18.91■□□□□ 0.62
PCDHB11-202ENST00000624887 CDH15P55291 814 aa18.91■□□□□ 0.62
PCDHB11-202ENST00000624887 RPS21P63220 83 aaKnown RBP18.91■□□□□ 0.62
PCDHB11-202ENST00000624887 EPS8Q12929 822 aa18.91■□□□□ 0.62
PCDHB11-202ENST00000624887 SPIDRQ14159 915 aa18.91■□□□□ 0.62
PCDHB11-202ENST00000624887 SPESP1Q6UW49 350 aa18.91■□□□□ 0.62
PCDHB11-202ENST00000624887 HS3ST5Q8IZT8 346 aa18.91■□□□□ 0.62
PCDHB11-202ENST00000624887 EZH1Q92800 747 aaPredicted RBP18.91■□□□□ 0.62
PCDHB11-202ENST00000624887 TBC1D20Q96BZ9 403 aa18.91■□□□□ 0.62
PCDHB11-202ENST00000624887 C1QTNF2Q9BXJ5 285 aa18.91■□□□□ 0.62
PCDHB11-202ENST00000624887 PCBD2Q9H0N5 130 aa18.91■□□□□ 0.62
PCDHB11-202ENST00000624887 RHBGQ9H310 441 aa18.91■□□□□ 0.62
PCDHB11-202ENST00000624887 SMURF2Q9HAU4 748 aa18.91■□□□□ 0.62
PCDHB11-202ENST00000624887 IL1RAPQ9NPH3 570 aa18.91■□□□□ 0.62
PCDHB11-202ENST00000624887 WASH6PQ9NQA3 447 aa18.91■□□□□ 0.62
PCDHB11-202ENST00000624887 TAC3Q9UHF0 121 aa18.91■□□□□ 0.62
PCDHB11-202ENST00000624887 MYO9BQ13459 2157 aa18.9■□□□□ 0.62
PCDHB11-202ENST00000624887 KLK1P06870 262 aa18.9■□□□□ 0.62
PCDHB11-202ENST00000624887 C2orf80Q0P641 193 aa18.9■□□□□ 0.62
PCDHB11-202ENST00000624887 C16orf72Q14CZ0 275 aa18.9■□□□□ 0.62
PCDHB11-202ENST00000624887 RGNQ15493 299 aa18.9■□□□□ 0.62
PCDHB11-202ENST00000624887 KIAA1211LQ6NV74 962 aa18.9■□□□□ 0.62
PCDHB11-202ENST00000624887 CBLL1Q75N03 491 aa18.9■□□□□ 0.62
PCDHB11-202ENST00000624887 EIF3MQ7L2H7 374 aaKnown RBP18.9■□□□□ 0.62
PCDHB11-202ENST00000624887 TMEM179BQ7Z7N9 219 aa18.9■□□□□ 0.62
PCDHB11-202ENST00000624887 OR4K1Q8NGD4 311 aa18.9■□□□□ 0.62
PCDHB11-202ENST00000624887 ADAMTS16Q8TE57 1224 aa18.9■□□□□ 0.62
PCDHB11-202ENST00000624887 SMPDL3AQ92484 453 aa18.9■□□□□ 0.62
PCDHB11-202ENST00000624887 MTERF3Q96E29 417 aa18.9■□□□□ 0.62
PCDHB11-202ENST00000624887 S1PR5Q9H228 398 aa18.9■□□□□ 0.62
PCDHB11-202ENST00000624887 TOR3AQ9H497 397 aa18.9■□□□□ 0.62
PCDHB11-202ENST00000624887 E2F6O75461 281 aa18.9■□□□□ 0.62
PCDHB11-202ENST00000624887 FUCA1P04066 466 aa18.9■□□□□ 0.62
PCDHB11-202ENST00000624887 SEMG1P04279 462 aa18.9■□□□□ 0.62
PCDHB11-202ENST00000624887 ETS2P15036 469 aa18.9■□□□□ 0.62
PCDHB11-202ENST00000624887 TAS2R50P59544 299 aa18.9■□□□□ 0.62
PCDHB11-202ENST00000624887 MC1RQ01726 317 aa18.9■□□□□ 0.62
PCDHB11-202ENST00000624887 IER5LQ5T953 404 aa18.9■□□□□ 0.62
PCDHB11-202ENST00000624887 CHST15Q7LFX5 561 aaPredicted RBP18.9■□□□□ 0.62
PCDHB11-202ENST00000624887 SLC9B2Q86UD5 537 aa18.9■□□□□ 0.62
PCDHB11-202ENST00000624887 HIPK1Q86Z02 1210 aa18.9■□□□□ 0.62
PCDHB11-202ENST00000624887 ABHD11Q8NFV4 315 aa18.9■□□□□ 0.62
PCDHB11-202ENST00000624887 KLK6Q92876 244 aa18.9■□□□□ 0.62
PCDHB11-202ENST00000624887 FAM131CQ96AQ9 280 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms