RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 C6orf136Q5SQH8 315 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 PPP1R13LQ8WUF5 828 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 SLC29A1Q99808 456 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 ATG10Q9H0Y0 220 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 AGPAT4Q9NRZ5 378 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 MSRAQ9UJ68 235 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 ARL5AQ9Y689 179 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 OR3A3P47888 321 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 OR3A2P47893 321 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 GK2Q14410 553 aaPredicted RBP8.64□□□□□ -1.03
VCL-206ENST00000623461 LIPKQ5VXJ0 399 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 FRG2Q64ET8 278 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 MAP1SQ66K74 1059 aaPredicted RBP8.64□□□□□ -1.03
VCL-206ENST00000623461 SMARCD3Q6STE5 483 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 ARSKQ6UWY0 536 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 ZNF627Q7L945 461 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 CILP2Q8IUL8 1156 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 TCEANCQ8N8B7 351 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 NFKBIDQ8NI38 313 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 DNASE1L2Q92874 299 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 FRG2BQ96QU4 278 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 EQTNQ9NQ60 294 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 KIAA1522Q9P206 1035 aaPredicted RBP8.64□□□□□ -1.03
VCL-206ENST00000623461 LRRTM2O43300 516 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 DIRAS1O95057 198 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 CFHP08603 1231 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 SLC35G4P0C7Q5 338 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 TACR2P21452 398 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 CA5AP35218 305 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 NKAPLQ5M9Q1 402 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 HACD4Q5VWC8 232 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 PRAMEF18Q5VWM3 479 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 SNX20Q7Z614 316 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 CADM2Q8N3J6 435 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 ZSCAN1Q8NBB4 408 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 GTF2H4Q92759 462 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 NEDD4LQ96PU5 975 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 TBX5Q99593 518 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 DOHHQ9BU89 302 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 BCO2Q9BYV7 579 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 GRXCR2A6NFK2 248 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 DUXAA6NLW8 204 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 EVI2BP34910 448 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 ST3GAL3Q11203 375 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 ATAD3CQ5T2N8 411 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 SAMD7Q7Z3H4 446 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 FTMTQ8N4E7 242 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 OR2L2Q8NH16 312 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 EMID1Q96A84 441 aaPredicted RBP8.64□□□□□ -1.03
VCL-206ENST00000623461 PTERQ96BW5 349 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 NLKQ9UBE8 527 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 FAAHO00519 579 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 MSI1O43347 362 aaKnown RBP8.64□□□□□ -1.03
VCL-206ENST00000623461 TLR5O60602 858 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 PRAF2O60831 178 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 PPM1BO75688 479 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 PAK4O96013 591 aaPredicted RBP8.64□□□□□ -1.03
VCL-206ENST00000623461 CREMQ03060 361 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 GALNT2Q10471 571 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 SNTB2Q13425 540 aaKnown RBP8.64□□□□□ -1.03
VCL-206ENST00000623461 FGFBP1Q14512 234 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 GPR33Q49SQ1 333 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 ZFAND4Q86XD8 727 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 OR5T2Q8NGG2 359 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 FERD3LQ96RJ6 166 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 OR6C75A6NL08 312 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 HLA-DQB2P05538 268 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 MAP3K8P41279 467 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 CHRNA4P43681 627 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 ETV1P50549 477 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 GRSF1Q12849 480 aaKnown RBP eCLIP8.64□□□□□ -1.03
VCL-206ENST00000623461 FGL2Q14314 439 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 PLEKHN1Q494U1 663 aaPredicted RBP8.64□□□□□ -1.03
VCL-206ENST00000623461 KLHL26Q53HC5 615 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 ATAT1Q5SQI0 421 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 PKP4Q99569 1192 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 SPATA31A5Q5VU36 1347 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 SPATA31A7Q8IWB4 1347 aa8.64□□□□□ -1.03
VCL-206ENST00000623461 CLDN24A6NM45 220 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 OR1I1O60431 355 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 ITGAMP11215 1152 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 PGAM2P15259 253 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 ATXN1P54253 815 aaKnown RBP8.63□□□□□ -1.03
VCL-206ENST00000623461 GK3PQ14409 553 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 GALNTL5Q7Z4T8 443 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 OR8J1Q8NGP2 316 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 NT5DC2Q9H857 520 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 RGS9O75916 674 aaPredicted RBP8.63□□□□□ -1.03
VCL-206ENST00000623461 CD47Q08722 323 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 C22orf42Q6IC83 251 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 PIWIL3Q7Z3Z3 882 aaKnown RBP8.63□□□□□ -1.03
VCL-206ENST00000623461 NPAS3Q8IXF0 933 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 CDKN2AIPNLQ96HQ2 116 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 PSKH2Q96QS6 385 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 CYP2S1Q96SQ9 504 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 TMEM185BQ9H7F4 350 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 TMEM184CQ9NVA4 438 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 ANKRD36CQ5JPF3 1778 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 C2orf74A8MZ97 194 aa8.63□□□□□ -1.03
VCL-206ENST00000623461 FAM163BP0C2L3 166 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms