RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 SLC22A14Q9Y267 594 aa16.21■□□□□ 0.19
HMGN3-203ENST00000620514 DYRK1BQ9Y463 629 aa16.21■□□□□ 0.19
HMGN3-203ENST00000620514 OARD1Q9Y530 152 aa16.21■□□□□ 0.19
HMGN3-203ENST00000620514 SLC22A7Q9Y694 548 aa16.21■□□□□ 0.19
HMGN3-203ENST00000620514 WFS1O76024 890 aa16.2■□□□□ 0.18
HMGN3-203ENST00000620514 WISP3O95389 354 aaPredicted RBP16.2■□□□□ 0.18
HMGN3-203ENST00000620514 F10P00742 488 aa16.2■□□□□ 0.18
HMGN3-203ENST00000620514 ARG2P78540 354 aa16.2■□□□□ 0.18
HMGN3-203ENST00000620514 REEP5Q00765 189 aa16.2■□□□□ 0.18
HMGN3-203ENST00000620514 CDC16Q13042 620 aa16.2■□□□□ 0.18
HMGN3-203ENST00000620514 TLR1Q15399 786 aa16.2■□□□□ 0.18
HMGN3-203ENST00000620514 TRADDQ15628 312 aa16.2■□□□□ 0.18
HMGN3-203ENST00000620514 NXPE4Q6UWF7 544 aa16.2■□□□□ 0.18
HMGN3-203ENST00000620514 SYT10Q6XYQ8 523 aa16.2■□□□□ 0.18
HMGN3-203ENST00000620514 CPEB2Q7Z5Q1 589 aaKnown RBP16.2■□□□□ 0.18
HMGN3-203ENST00000620514 TMPRSS11BQ86T26 416 aa16.2■□□□□ 0.18
HMGN3-203ENST00000620514 SPATA6LQ8N4H0 392 aa16.2■□□□□ 0.18
HMGN3-203ENST00000620514 ANKRD53Q8N9V6 530 aa16.2■□□□□ 0.18
HMGN3-203ENST00000620514 GRHL3Q8TE85 626 aa16.2■□□□□ 0.18
HMGN3-203ENST00000620514 ANKRD7Q92527 254 aa16.2■□□□□ 0.18
HMGN3-203ENST00000620514 PEX11GQ96HA9 241 aa16.2■□□□□ 0.18
HMGN3-203ENST00000620514 EGFL8Q99944 293 aa16.2■□□□□ 0.18
HMGN3-203ENST00000620514 TUBB6Q9BUF5 446 aa16.2■□□□□ 0.18
HMGN3-203ENST00000620514 PELI2Q9HAT8 420 aa16.2■□□□□ 0.18
HMGN3-203ENST00000620514 LRRC4CQ9HCJ2 640 aa16.2■□□□□ 0.18
HMGN3-203ENST00000620514 GPAMQ9HCL2 828 aa16.2■□□□□ 0.18
HMGN3-203ENST00000620514 TCRBV9S1A1TA0A576 114 aa16.19■□□□□ 0.18
HMGN3-203ENST00000620514 ANKUB1A6NFN9 424 aa16.19■□□□□ 0.18
HMGN3-203ENST00000620514 EIF3HO15372 352 aaKnown RBP eCLIP16.19■□□□□ 0.18
HMGN3-203ENST00000620514 PHGDHO43175 533 aaKnown RBP16.19■□□□□ 0.18
HMGN3-203ENST00000620514 GALR3O60755 368 aaPredicted RBP16.19■□□□□ 0.18
HMGN3-203ENST00000620514 CDC123O75794 336 aaPredicted RBP16.19■□□□□ 0.18
HMGN3-203ENST00000620514 C1QAP02745 245 aa16.19■□□□□ 0.18
HMGN3-203ENST00000620514 UQCRHP07919 91 aa16.19■□□□□ 0.18
HMGN3-203ENST00000620514 ZNF888P0CJ79 500 aaPredicted RBP16.19■□□□□ 0.18
HMGN3-203ENST00000620514 GP1BBP13224 206 aa16.19■□□□□ 0.18
HMGN3-203ENST00000620514 GDF5P43026 501 aa16.19■□□□□ 0.18
HMGN3-203ENST00000620514 GPX6P59796 221 aa16.19■□□□□ 0.18
HMGN3-203ENST00000620514 ETF1P62495 437 aaKnown RBP16.19■□□□□ 0.18
HMGN3-203ENST00000620514 OLR1P78380 273 aa16.19■□□□□ 0.18
HMGN3-203ENST00000620514 CDKL1Q00532 357 aa16.19■□□□□ 0.18
HMGN3-203ENST00000620514 POU4F1Q01851 419 aa16.19■□□□□ 0.18
HMGN3-203ENST00000620514 PWP1Q13610 501 aa16.19■□□□□ 0.18
HMGN3-203ENST00000620514 HERC3Q15034 1050 aa16.19■□□□□ 0.18
HMGN3-203ENST00000620514 DEFB134Q4QY38 66 aa16.19■□□□□ 0.18
HMGN3-203ENST00000620514 RIPOR1Q6ZS17 1223 aa16.19■□□□□ 0.18
HMGN3-203ENST00000620514 ANKRD37Q7Z713 158 aa16.19■□□□□ 0.18
HMGN3-203ENST00000620514 TBC1D19Q8N5T2 526 aa16.19■□□□□ 0.18
HMGN3-203ENST00000620514 OR1N1Q8NGS0 311 aa16.19■□□□□ 0.18
HMGN3-203ENST00000620514 NT5CQ8TCD5 201 aa16.19■□□□□ 0.18
HMGN3-203ENST00000620514 SSC4DQ8WTU2 575 aa16.19■□□□□ 0.18
HMGN3-203ENST00000620514 POPDC3Q9HBV1 291 aa16.19■□□□□ 0.18
HMGN3-203ENST00000620514 LANCL2Q9NS86 450 aa16.19■□□□□ 0.18
HMGN3-203ENST00000620514 ZFP69BQ9UJL9 534 aa16.19■□□□□ 0.18
HMGN3-203ENST00000620514 HIVEP3Q5T1R4 2406 aa16.18■□□□□ 0.18
HMGN3-203ENST00000620514 NCF1BA6NI72 391 aaPredicted RBP16.18■□□□□ 0.18
HMGN3-203ENST00000620514 NCF1CA8MVU1 366 aaPredicted RBP16.18■□□□□ 0.18
HMGN3-203ENST00000620514 NCF1P14598 390 aaPredicted RBP16.18■□□□□ 0.18
HMGN3-203ENST00000620514 ALOX12P18054 663 aa16.18■□□□□ 0.18
HMGN3-203ENST00000620514 HNF4AP41235 474 aa16.18■□□□□ 0.18
HMGN3-203ENST00000620514 SLC12A2P55011 1212 aa16.18■□□□□ 0.18
HMGN3-203ENST00000620514 PLTPP55058 493 aa16.18■□□□□ 0.18
HMGN3-203ENST00000620514 RHAGQ02094 409 aa16.18■□□□□ 0.18
HMGN3-203ENST00000620514 USP10Q14694 798 aaKnown RBP16.18■□□□□ 0.18
HMGN3-203ENST00000620514 HIST2H2BCQ6DN03 193 aa16.18■□□□□ 0.18
HMGN3-203ENST00000620514 FRA10AC1Q70Z53 315 aa16.18■□□□□ 0.18
HMGN3-203ENST00000620514 ADAMTSL2Q86TH1 951 aa16.18■□□□□ 0.18
HMGN3-203ENST00000620514 CDKL2Q92772 493 aa16.18■□□□□ 0.18
HMGN3-203ENST00000620514 TSLPQ969D9 159 aa16.18■□□□□ 0.18
HMGN3-203ENST00000620514 RHBDF1Q96CC6 855 aa16.18■□□□□ 0.18
HMGN3-203ENST00000620514 AIF1LQ9BQI0 150 aa16.18■□□□□ 0.18
HMGN3-203ENST00000620514 DERL2Q9GZP9 239 aa16.18■□□□□ 0.18
HMGN3-203ENST00000620514 KLHL31Q9H511 634 aa16.18■□□□□ 0.18
HMGN3-203ENST00000620514 AGPAT4Q9NRZ5 378 aa16.18■□□□□ 0.18
HMGN3-203ENST00000620514 C19orf25Q9UFG5 118 aaPredicted RBP16.18■□□□□ 0.18
HMGN3-203ENST00000620514 SPTAN1Q13813 2472 aaKnown RBP16.18■□□□□ 0.18
HMGN3-203ENST00000620514 DYTNA2CJ06 578 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 FAM159BA6NKW6 160 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 C4orf51C9J302 202 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 E2F3O00716 465 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 CHST10O43529 356 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 WDR47O94967 919 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 WDPCPO95876 746 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 CYC1P08574 325 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 ICAM2P13598 275 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 AHRP35869 848 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 GMPRP36959 345 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 SLC6A12P48065 614 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 TNFSF10P50591 281 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 RAB8AP61006 207 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 RGS1Q08116 209 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 HYAL2Q12891 473 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 RBBP5Q15291 538 aaKnown RBP16.17■□□□□ 0.18
HMGN3-203ENST00000620514 BTBD16Q32M84 506 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 FBXO48Q5FWF7 155 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 ZDHHC24Q6UX98 284 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 C3orf62Q6ZUJ4 267 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 FBXO25Q8TCJ0 367 aa16.17■□□□□ 0.18
HMGN3-203ENST00000620514 UTP15Q8TED0 518 aaKnown RBP16.17■□□□□ 0.18
HMGN3-203ENST00000620514 HAS2Q92819 552 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms