RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 BIRC5O15392 142 aa14.19□□□□□ -0.14
UBXN1-218ENST00000616865 DPM1O60762 260 aa14.19□□□□□ -0.14
UBXN1-218ENST00000616865 TRIM13O60858 407 aa14.19□□□□□ -0.14
UBXN1-218ENST00000616865 SUPT7LO94864 414 aa14.19□□□□□ -0.14
UBXN1-218ENST00000616865 FKBP9O95302 570 aa14.19□□□□□ -0.14
UBXN1-218ENST00000616865 SIX3O95343 332 aaPredicted RBP14.19□□□□□ -0.14
UBXN1-218ENST00000616865 KLK3P07288 261 aaPredicted RBP14.19□□□□□ -0.14
UBXN1-218ENST00000616865 BPGMP07738 259 aa14.19□□□□□ -0.14
UBXN1-218ENST00000616865 RAB40ALP0C0E4 278 aa14.19□□□□□ -0.14
UBXN1-218ENST00000616865 IMPDH1P20839 514 aa14.19□□□□□ -0.14
UBXN1-218ENST00000616865 PEBP1P30086 187 aaKnown RBP14.19□□□□□ -0.14
UBXN1-218ENST00000616865 DNAJB13P59910 316 aa14.19□□□□□ -0.14
UBXN1-218ENST00000616865 NAA20P61599 178 aa14.19□□□□□ -0.14
UBXN1-218ENST00000616865 ABATP80404 500 aa14.19□□□□□ -0.14
UBXN1-218ENST00000616865 CDC16Q13042 620 aa14.19□□□□□ -0.14
UBXN1-218ENST00000616865 MPP2Q14168 576 aa14.19□□□□□ -0.14
UBXN1-218ENST00000616865 PCLAFQ15004 111 aa14.19□□□□□ -0.14
UBXN1-218ENST00000616865 PCBP2Q15366 365 aaKnown RBP eCLIP14.19□□□□□ -0.14
UBXN1-218ENST00000616865 INPP5JQ15735 1006 aaPredicted RBP14.19□□□□□ -0.14
UBXN1-218ENST00000616865 ICE2Q659A1 982 aa14.19□□□□□ -0.14
UBXN1-218ENST00000616865 JMJD6Q6NYC1 403 aaPredicted RBP14.19□□□□□ -0.14
UBXN1-218ENST00000616865 TRIM73Q86UV7 250 aa14.19□□□□□ -0.14
UBXN1-218ENST00000616865 KLHDC8AQ8IYD2 350 aa14.19□□□□□ -0.14
UBXN1-218ENST00000616865 LRRC56Q8IYG6 542 aaPredicted RBP14.19□□□□□ -0.14
UBXN1-218ENST00000616865 DSELQ8IZU8 1212 aa14.19□□□□□ -0.14
UBXN1-218ENST00000616865 ENDOVQ8N8Q3 282 aaKnown RBP14.19□□□□□ -0.14
UBXN1-218ENST00000616865 Q8NA96 180 aa14.19□□□□□ -0.14
UBXN1-218ENST00000616865 FDCSPQ8NFU4 85 aa14.19□□□□□ -0.14
UBXN1-218ENST00000616865 MECRQ9BV79 373 aa14.19□□□□□ -0.14
UBXN1-218ENST00000616865 LUZP4Q9P127 313 aa14.19□□□□□ -0.14
UBXN1-218ENST00000616865 TCP11X1B4DZS4 312 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 MEN1O00255 615 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 H2AFYO75367 372 aaKnown RBP14.18□□□□□ -0.14
UBXN1-218ENST00000616865 CDH1P12830 882 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 NPPBP16860 134 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 GNAZP19086 355 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 RORAP35398 523 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 ETV4P43268 484 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 NAGLUP54802 743 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 PRDX1Q06830 199 aaKnown RBP14.18□□□□□ -0.14
UBXN1-218ENST00000616865 GTF2H2Q13888 395 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 ZNF678Q5SXM1 525 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 PRAMEF17Q5VTA0 474 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 LCN10Q6JVE6 187 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 GTF2H2CQ6P1K8 395 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 FAM198BQ6UWH4 519 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 GOLGA7Q7Z5G4 137 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 HPS6Q86YV9 775 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 TRIM42Q8IWZ5 723 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 TBC1D19Q8N5T2 526 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 OR2L3Q8NG85 312 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 OR2A1Q8NGT9 310 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 SLC5A11Q8WWX8 675 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 L3HYPDHQ96EM0 354 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 PPM1MQ96MI6 270 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 TMEM237Q96Q45 408 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 NUDT9Q9BW91 350 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 NLNQ9BYT8 704 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 SLC29A3Q9BZD2 475 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 FANCEQ9HB96 536 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 C1GALT1Q9NS00 363 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 INTS9Q9NV88 658 aaKnown RBP14.18□□□□□ -0.14
UBXN1-218ENST00000616865 GPRC5BQ9NZH0 403 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 PCTPQ9UKL6 214 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 TCFL5Q9UL49 500 aa14.18□□□□□ -0.14
UBXN1-218ENST00000616865 G3BP2Q9UN86 482 aaKnown RBP14.18□□□□□ -0.14
UBXN1-218ENST00000616865 A1L4Q6 167 aa14.17□□□□□ -0.14
UBXN1-218ENST00000616865 H3BQF6 201 aa14.17□□□□□ -0.14
UBXN1-218ENST00000616865 PRICKLE3O43900 615 aaPredicted RBP14.17□□□□□ -0.14
UBXN1-218ENST00000616865 CHN1P15882 459 aa14.17□□□□□ -0.14
UBXN1-218ENST00000616865 HRH2P25021 359 aa14.17□□□□□ -0.14
UBXN1-218ENST00000616865 GRK3P35626 688 aa14.17□□□□□ -0.14
UBXN1-218ENST00000616865 CCR8P51685 355 aa14.17□□□□□ -0.14
UBXN1-218ENST00000616865 CCNG1P51959 295 aa14.17□□□□□ -0.14
UBXN1-218ENST00000616865 IRF8Q02556 426 aa14.17□□□□□ -0.14
UBXN1-218ENST00000616865 MRPL49Q13405 166 aaKnown RBP14.17□□□□□ -0.14
UBXN1-218ENST00000616865 UNC50Q53HI1 259 aa14.17□□□□□ -0.14
UBXN1-218ENST00000616865 FAM69BQ5VUD6 431 aa14.17□□□□□ -0.14
UBXN1-218ENST00000616865 SLC6A19Q695T7 634 aa14.17□□□□□ -0.14
UBXN1-218ENST00000616865 FIGLAQ6QHK4 219 aa14.17□□□□□ -0.14
UBXN1-218ENST00000616865 TMPRSS11BQ86T26 416 aa14.17□□□□□ -0.14
UBXN1-218ENST00000616865 MYLK4Q86YV6 388 aaPredicted RBP14.17□□□□□ -0.14
UBXN1-218ENST00000616865 FAM20CQ8IXL6 584 aa14.17□□□□□ -0.14
UBXN1-218ENST00000616865 PNPLA2Q96AD5 504 aa14.17□□□□□ -0.14
UBXN1-218ENST00000616865 CLIP3Q96DZ5 547 aa14.17□□□□□ -0.14
UBXN1-218ENST00000616865 DPH7Q9BTV6 452 aa14.17□□□□□ -0.14
UBXN1-218ENST00000616865 DRC3Q9H069 523 aa14.17□□□□□ -0.14
UBXN1-218ENST00000616865 KLHL25Q9H0H3 589 aa14.17□□□□□ -0.14
UBXN1-218ENST00000616865 IPPKQ9H8X2 491 aa14.17□□□□□ -0.14
UBXN1-218ENST00000616865 SEMA4BQ9NPR2 832 aaPredicted RBP14.17□□□□□ -0.14
UBXN1-218ENST00000616865 SLAMF7Q9NQ25 335 aa14.17□□□□□ -0.14
UBXN1-218ENST00000616865 STK38LQ9Y2H1 464 aa14.17□□□□□ -0.14
UBXN1-218ENST00000616865 ESPL1Q14674 2120 aa14.17□□□□□ -0.14
UBXN1-218ENST00000616865 SLC9B1P1A6NJY1 282 aa14.16□□□□□ -0.14
UBXN1-218ENST00000616865 E2F3O00716 465 aa14.16□□□□□ -0.14
UBXN1-218ENST00000616865 MLYCDO95822 493 aa14.16□□□□□ -0.14
UBXN1-218ENST00000616865 DDAH2O95865 285 aa14.16□□□□□ -0.14
UBXN1-218ENST00000616865 CAPN1P07384 714 aa14.16□□□□□ -0.14
UBXN1-218ENST00000616865 RPS17P08708 135 aaKnown RBP14.16□□□□□ -0.14
UBXN1-218ENST00000616865 DHRS4L1P0CG22 281 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms