RNA–Protein interactions for RNA: ENST00000615393.5

VEGFA-227, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 984 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-227ENST00000615393 RBBP8Q99708 897 aa23.82■■□□□ 1.4
VEGFA-227ENST00000615393 DERL2Q9GZP9 239 aa23.82■■□□□ 1.4
VEGFA-227ENST00000615393 AGPAT4Q9NRZ5 378 aa23.82■■□□□ 1.4
VEGFA-227ENST00000615393 DYTNA2CJ06 578 aa23.81■■□□□ 1.4
VEGFA-227ENST00000615393 FAM159BA6NKW6 160 aa23.81■■□□□ 1.4
VEGFA-227ENST00000615393 ALOX12P18054 663 aa23.81■■□□□ 1.4
VEGFA-227ENST00000615393 SOX11P35716 441 aa23.81■■□□□ 1.4
VEGFA-227ENST00000615393 GP5P40197 560 aa23.81■■□□□ 1.4
VEGFA-227ENST00000615393 AGTR2P50052 363 aa23.81■■□□□ 1.4
VEGFA-227ENST00000615393 EFNA3P52797 238 aa23.81■■□□□ 1.4
VEGFA-227ENST00000615393 CDC16Q13042 620 aa23.81■■□□□ 1.4
VEGFA-227ENST00000615393 NR6A1Q15406 480 aa23.81■■□□□ 1.4
VEGFA-227ENST00000615393 NXPE4Q6UWF7 544 aa23.81■■□□□ 1.4
VEGFA-227ENST00000615393 ABHD13Q7L211 337 aa23.81■■□□□ 1.4
VEGFA-227ENST00000615393 ZNF572Q7Z3I7 529 aaPredicted RBP23.81■■□□□ 1.4
VEGFA-227ENST00000615393 CPEB2Q7Z5Q1 589 aaKnown RBP23.81■■□□□ 1.4
VEGFA-227ENST00000615393 AFAP1L2Q8N4X5 818 aa23.81■■□□□ 1.4
VEGFA-227ENST00000615393 SIRT6Q8N6T7 355 aa23.81■■□□□ 1.4
VEGFA-227ENST00000615393 PSMF1Q92530 271 aa23.81■■□□□ 1.4
VEGFA-227ENST00000615393 MOCOSQ96EN8 888 aa23.81■■□□□ 1.4
VEGFA-227ENST00000615393 OR1F2PQ96R84 312 aa23.81■■□□□ 1.4
VEGFA-227ENST00000615393 GPR22Q99680 433 aa23.81■■□□□ 1.4
VEGFA-227ENST00000615393 SPNS1Q9H2V7 528 aa23.81■■□□□ 1.4
VEGFA-227ENST00000615393 SHANK1Q9Y566 2161 aa23.81■■□□□ 1.4
VEGFA-227ENST00000615393 URADA6NGE7 173 aa23.8■■□□□ 1.4
VEGFA-227ENST00000615393 WISP3O95389 354 aaPredicted RBP23.8■■□□□ 1.4
VEGFA-227ENST00000615393 STMN1P16949 149 aa23.8■■□□□ 1.4
VEGFA-227ENST00000615393 ARG2P78540 354 aa23.8■■□□□ 1.4
VEGFA-227ENST00000615393 CCDC25Q86WR0 208 aa23.8■■□□□ 1.4
VEGFA-227ENST00000615393 CTAGE3PQ8IX95 158 aa23.8■■□□□ 1.4
VEGFA-227ENST00000615393 TRPV3Q8NET8 790 aa23.8■■□□□ 1.4
VEGFA-227ENST00000615393 IMMP1LQ96LU5 166 aa23.8■■□□□ 1.4
VEGFA-227ENST00000615393 CAB39LQ9H9S4 337 aa23.8■■□□□ 1.4
VEGFA-227ENST00000615393 DOCK10Q96BY6 2186 aa23.79■■□□□ 1.4
VEGFA-227ENST00000615393 ZNF860A6NHJ4 632 aa23.79■■□□□ 1.4
VEGFA-227ENST00000615393 GALR3O60755 368 aaPredicted RBP23.79■■□□□ 1.4
VEGFA-227ENST00000615393 WDR47O94967 919 aa23.79■■□□□ 1.4
VEGFA-227ENST00000615393 CBX6O95503 412 aa23.79■■□□□ 1.4
VEGFA-227ENST00000615393 CELA2AP08217 269 aa23.79■■□□□ 1.4
VEGFA-227ENST00000615393 CCDC166P0CW27 439 aa23.79■■□□□ 1.4
VEGFA-227ENST00000615393 GPX6P59796 221 aa23.79■■□□□ 1.4
VEGFA-227ENST00000615393 CKAP4Q07065 602 aaKnown RBP23.79■■□□□ 1.4
VEGFA-227ENST00000615393 RBBP5Q15291 538 aaKnown RBP23.79■■□□□ 1.4
VEGFA-227ENST00000615393 TGFBIQ15582 683 aa23.79■■□□□ 1.4
VEGFA-227ENST00000615393 EIF2S3LQ2VIR3 472 aaKnown RBP23.79■■□□□ 1.4
VEGFA-227ENST00000615393 DEFB134Q4QY38 66 aa23.79■■□□□ 1.4
VEGFA-227ENST00000615393 LANCL3Q6ZV70 420 aa23.79■■□□□ 1.4
VEGFA-227ENST00000615393 KLHDC8AQ8IYD2 350 aa23.79■■□□□ 1.4
VEGFA-227ENST00000615393 TCAIMQ8N3R3 496 aa23.79■■□□□ 1.4
VEGFA-227ENST00000615393 FBXO25Q8TCJ0 367 aa23.79■■□□□ 1.4
VEGFA-227ENST00000615393 RHBDF1Q96CC6 855 aa23.79■■□□□ 1.4
VEGFA-227ENST00000615393 PEX11GQ96HA9 241 aa23.79■■□□□ 1.4
VEGFA-227ENST00000615393 BARD1Q99728 777 aaKnown RBP23.79■■□□□ 1.4
VEGFA-227ENST00000615393 PHGDHO43175 533 aaKnown RBP23.78■■□□□ 1.4
VEGFA-227ENST00000615393 SEC24DO94855 1032 aaPredicted RBP23.78■■□□□ 1.4
VEGFA-227ENST00000615393 ZNF888P0CJ79 500 aaPredicted RBP23.78■■□□□ 1.4
VEGFA-227ENST00000615393 ITGAMP11215 1152 aa23.78■■□□□ 1.4
VEGFA-227ENST00000615393 GNAZP19086 355 aa23.78■■□□□ 1.4
VEGFA-227ENST00000615393 SPRP35270 261 aaPredicted RBP23.78■■□□□ 1.4
VEGFA-227ENST00000615393 SLC6A12P48065 614 aa23.78■■□□□ 1.4
VEGFA-227ENST00000615393 ELOAQ14241 798 aaKnown RBP23.78■■□□□ 1.4
VEGFA-227ENST00000615393 GRTP1Q5TC63 336 aa23.78■■□□□ 1.4
VEGFA-227ENST00000615393 ANKRD37Q7Z713 158 aa23.78■■□□□ 1.4
VEGFA-227ENST00000615393 SHISA5Q8N114 240 aa23.78■■□□□ 1.4
VEGFA-227ENST00000615393 OR5T3Q8NGG3 340 aa23.78■■□□□ 1.4
VEGFA-227ENST00000615393 PRR7Q8TB68 274 aa23.78■■□□□ 1.4
VEGFA-227ENST00000615393 UNKQ9C0B0 810 aaKnown RBP23.78■■□□□ 1.4
VEGFA-227ENST00000615393 TEKT2Q9UIF3 430 aa23.78■■□□□ 1.4
VEGFA-227ENST00000615393 NTNG1Q9Y2I2 539 aa23.78■■□□□ 1.4
VEGFA-227ENST00000615393 BLACEA4D250 179 aa23.77■■□□□ 1.4
VEGFA-227ENST00000615393 NCF1BA6NI72 391 aaPredicted RBP23.77■■□□□ 1.4
VEGFA-227ENST00000615393 NCF1CA8MVU1 366 aaPredicted RBP23.77■■□□□ 1.4
VEGFA-227ENST00000615393 H2AFYO75367 372 aaKnown RBP23.77■■□□□ 1.4
VEGFA-227ENST00000615393 NCF1P14598 390 aaPredicted RBP23.77■■□□□ 1.4
VEGFA-227ENST00000615393 JAK1P23458 1154 aa23.77■■□□□ 1.4
VEGFA-227ENST00000615393 STX2P32856 288 aa23.77■■□□□ 1.4
VEGFA-227ENST00000615393 MAGEA4P43358 317 aa23.77■■□□□ 1.4
VEGFA-227ENST00000615393 ATP6V0D1P61421 351 aa23.77■■□□□ 1.4
VEGFA-227ENST00000615393 BTBD16Q32M84 506 aa23.77■■□□□ 1.4
VEGFA-227ENST00000615393 PLAG1Q6DJT9 500 aa23.77■■□□□ 1.4
VEGFA-227ENST00000615393 RPUSD3Q6P087 351 aaKnown RBP23.77■■□□□ 1.4
VEGFA-227ENST00000615393 GPSM1Q86YR5 675 aa23.77■■□□□ 1.4
VEGFA-227ENST00000615393 ANKRD53Q8N9V6 530 aa23.77■■□□□ 1.4
VEGFA-227ENST00000615393 PLPP5Q8NEB5 264 aa23.77■■□□□ 1.4
VEGFA-227ENST00000615393 CATSPER1Q8NEC5 780 aa23.77■■□□□ 1.4
VEGFA-227ENST00000615393 UTP15Q8TED0 518 aaKnown RBP23.77■■□□□ 1.4
VEGFA-227ENST00000615393 HAS2Q92819 552 aa23.77■■□□□ 1.4
VEGFA-227ENST00000615393 TBC1D20Q96BZ9 403 aa23.77■■□□□ 1.4
VEGFA-227ENST00000615393 CAPS2Q9BXY5 557 aa23.77■■□□□ 1.4
VEGFA-227ENST00000615393 RBCK1Q9BYM8 510 aa23.77■■□□□ 1.4
VEGFA-227ENST00000615393 SLC6A16Q9GZN6 736 aa23.77■■□□□ 1.4
VEGFA-227ENST00000615393 CNOT10Q9H9A5 744 aaKnown RBP23.77■■□□□ 1.4
VEGFA-227ENST00000615393 CLK4Q9HAZ1 481 aaKnown RBP23.77■■□□□ 1.4
VEGFA-227ENST00000615393 LRRC4CQ9HCJ2 640 aa23.77■■□□□ 1.4
VEGFA-227ENST00000615393 FLNCQ14315 2725 aa23.77■■□□□ 1.4
VEGFA-227ENST00000615393 TRAV17A0A0B4J275 112 aa23.76■■□□□ 1.39
VEGFA-227ENST00000615393 IGHV3-20A0A0C4DH32 117 aa23.76■■□□□ 1.39
VEGFA-227ENST00000615393 ANKUB1A6NFN9 424 aa23.76■■□□□ 1.39
VEGFA-227ENST00000615393 CDC123O75794 336 aaPredicted RBP23.76■■□□□ 1.39
VEGFA-227ENST00000615393 FHP07954 510 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms