RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 MYLK2Q9H1R3 596 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 ZNF385DQ9H6B1 395 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 AKTIPQ9H8T0 292 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 FARSBQ9NSD9 589 aaKnown RBP10.95□□□□□ -0.66
SLIRP-212ENST00000613856 HRASLS2Q9NWW9 162 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 LRIT1Q9P2V4 623 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 EPHA6Q9UF33 1036 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 SNX7Q9UNH6 387 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 BSNQ9UPA5 3926 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 SPTA1P02549 2419 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 LY6G6EA0A0G2JKS1 128 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 OR2A25A4D2G3 310 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 E9PBE3 544 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 H7BY64 318 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 FCHO1O14526 889 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 LSM1O15116 133 aaKnown RBP10.94□□□□□ -0.66
SLIRP-212ENST00000613856 CASC3O15234 703 aaKnown RBP10.94□□□□□ -0.66
SLIRP-212ENST00000613856 KLHL41O60662 606 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 WISP1O95388 367 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 ACPPP15309 386 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 EZRP15311 586 aaKnown RBP10.94□□□□□ -0.66
SLIRP-212ENST00000613856 CKMT2P17540 419 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 LBPP18428 481 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 GRK3P35626 688 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 GRIA3P42263 894 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 SCTRP47872 440 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 MRPL19P49406 292 aaKnown RBP10.94□□□□□ -0.66
SLIRP-212ENST00000613856 ATP4BP51164 291 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 ERVK-8P63133 956 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 NR6A1Q15406 480 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 PROX2Q3B8N5 592 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 ATP6AP1LQ52LC2 224 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 TRPM8Q7Z2W7 1104 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 SPATA19Q7Z5L4 167 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 CARFQ8N187 725 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 TBC1D19Q8N5T2 526 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 HUS1BQ8NHY5 278 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 NAT6Q93015 286 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 APOLD1Q96LR9 279 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 PRAP1Q96NZ9 151 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 LRRC37BQ96QE4 947 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 CD180Q99467 661 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 DPH7Q9BTV6 452 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 NMUR2Q9GZQ4 415 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 DMRT3Q9NQL9 472 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 ASIC5Q9NY37 505 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 PADI4Q9UM07 663 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 U3KQA8 63 aa10.94□□□□□ -0.66
SLIRP-212ENST00000613856 MN1Q10571 1320 aaPredicted RBP10.93□□□□□ -0.66
SLIRP-212ENST00000613856 IGHV1OR21-1A0A087WYE8 117 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 ATP6AP2A0A1C7CYW4 349 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 EME2A4GXA9 379 aaPredicted RBP10.93□□□□□ -0.66
SLIRP-212ENST00000613856 EBAG9O00559 213 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 HAT1O14929 419 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 SLC22A2O15244 555 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 KLK10O43240 276 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 ZW10O43264 779 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 SIGLEC6O43699 453 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 DUX1O43812 170 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 ATP6AP2O75787 350 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 MT-CO3P00414 261 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 PCNAP12004 261 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 PCSK2P16519 638 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 TYRP1P17643 537 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 AMD1P17707 334 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 ADSLP30566 484 aaPredicted RBP10.93□□□□□ -0.66
SLIRP-212ENST00000613856 AHRP35869 848 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 NEK2P51955 445 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 TMPRSS3P57727 454 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 RPS15AP62244 130 aaKnown RBP10.93□□□□□ -0.66
SLIRP-212ENST00000613856 GABREP78334 506 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 MEF2AQ02078 507 aaPredicted RBP10.93□□□□□ -0.66
SLIRP-212ENST00000613856 RHDQ02161 417 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 MAD2L1Q13257 205 aaPredicted RBP10.93□□□□□ -0.66
SLIRP-212ENST00000613856 IMPG1Q17R60 797 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 SGO1Q5FBB7 561 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 C6orf136Q5SQH8 315 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 NXNQ6DKJ4 435 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 SCIMPQ6UWF3 145 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 PRICKLE2Q7Z3G6 844 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 VN1R5Q7Z5H4 357 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 ADCK2Q7Z695 626 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 CLNKQ7Z7G1 428 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 MTDHQ86UE4 582 aaKnown RBP10.93□□□□□ -0.66
SLIRP-212ENST00000613856 TRIM73Q86UV7 250 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 ZFAND4Q86XD8 727 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 PARP9Q8IXQ6 854 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.93□□□□□ -0.66
SLIRP-212ENST00000613856 CPSF7Q8N684 471 aaKnown RBP10.93□□□□□ -0.66
SLIRP-212ENST00000613856 ZNF248Q8NDW4 579 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 ZNF740Q8NDX6 193 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 ZUFSPQ96AP4 578 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 ERP27Q96DN0 273 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 THAP11Q96EK4 314 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 CMTM7Q96FZ5 175 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 FCRL1Q96LA6 429 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 HBEGFQ99075 208 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 ABCG4Q9H172 646 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 SEMA6CQ9H3T2 930 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 LRTM1Q9HBL6 345 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms