RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 GOLM1Q8NBJ4 401 aa10.49□□□□□ -0.73
FAM3A-221ENST00000612856 JSRP1Q96MG2 331 aaPredicted RBP10.49□□□□□ -0.73
FAM3A-221ENST00000612856 OR52E6Q96RD3 313 aa10.49□□□□□ -0.73
FAM3A-221ENST00000612856 AIF1LQ9BQI0 150 aa10.49□□□□□ -0.73
FAM3A-221ENST00000612856 ANKMY1Q9P2S6 941 aa10.49□□□□□ -0.73
FAM3A-221ENST00000612856 NUP214P35658 2090 aaPredicted RBP10.48□□□□□ -0.73
FAM3A-221ENST00000612856 TMEM265A0A087WTH1 108 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 RTCAO00442 366 aaKnown RBP10.48□□□□□ -0.73
FAM3A-221ENST00000612856 PIP5K1BO14986 540 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 FAM20BO75063 409 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 TLX1P31314 330 aaPredicted RBP10.48□□□□□ -0.73
FAM3A-221ENST00000612856 ACSL1P33121 698 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 STC1P52823 247 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 RAB41Q5JT25 222 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 IER5LQ5T953 404 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 SHISA6Q6ZSJ9 500 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 GPR149Q86SP6 731 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 MFSD6LQ8IWD5 586 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 PDPRQ8NCN5 879 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 NDNFQ8TB73 568 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 CGREF1Q99674 301 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 CTRCQ99895 268 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 EXO5Q9H790 373 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 PTGDR2Q9Y5Y4 395 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 THRBP10828 461 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 UMPSP11172 480 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 OXTRP30559 389 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 MAP2K4P45985 399 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 NNATQ16517 81 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 GPAT3Q53EU6 434 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 ZNF773Q6PK81 442 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 SFTPA1Q8IWL2 248 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 DTX3Q8N9I9 347 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 OR10Q1Q8NGQ4 319 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 TWIST2Q8WVJ9 160 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 TMEM74Q96NL1 305 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 RMND5AQ9H871 391 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 PLAC1Q9HBJ0 212 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 GNB5O14775 395 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 ERI3O43414 337 aaKnown RBP10.48□□□□□ -0.73
FAM3A-221ENST00000612856 PRKD3O94806 890 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 IL9P15248 144 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 MAPK1P28482 360 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 RGS1Q08116 209 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 SQLEQ14534 574 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 LAPTM4AQ15012 233 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 NHSL2Q5HYW2 709 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 DESI1Q6ICB0 168 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 CEP97Q8IW35 865 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 EFHD2Q96C19 240 aaPredicted RBP10.48□□□□□ -0.73
FAM3A-221ENST00000612856 ITCHQ96J02 903 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 PCDHGA8Q9Y5G5 932 aa10.48□□□□□ -0.73
FAM3A-221ENST00000612856 ANK1P16157 1881 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 C12orf71A8MTZ7 269 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 MLYCDO95822 493 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 TNFP01375 233 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 TMBIM6P55061 237 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 RPS21P63220 83 aaKnown RBP10.47□□□□□ -0.73
FAM3A-221ENST00000612856 SRSF11Q05519 484 aaKnown RBP10.47□□□□□ -0.73
FAM3A-221ENST00000612856 EIF4HQ15056 248 aaKnown RBP10.47□□□□□ -0.73
FAM3A-221ENST00000612856 OXA1LQ15070 435 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 FAM209AQ5JX71 171 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 TTC23Q5W5X9 447 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 FAM92BQ6ZTR7 304 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 HTR3DQ70Z44 454 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 BEND5Q7L4P6 421 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 TMEM126BQ8IUX1 230 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 RASGRP3Q8IV61 690 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 ALDH16A1Q8IZ83 802 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 CENPLQ8N0S6 344 aaPredicted RBP10.47□□□□□ -0.73
FAM3A-221ENST00000612856 GJD3Q8N144 294 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 KAT2AQ92830 837 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 LTB4R2Q9NPC1 389 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 TMEM9Q9P0T7 183 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 SUCOQ9UBS9 1254 aaKnown RBP10.47□□□□□ -0.73
FAM3A-221ENST00000612856 RAPGEFL1Q9UHV5 662 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 MAP4K5Q9Y4K4 846 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 ALPK2Q86TB3 2170 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 C2CD4DB7Z1M9 353 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 LOC730098B7Z3J9 87 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 NDUFS4O43181 175 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 METAP1P53582 386 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 SNRPD2P62316 118 aaKnown RBP10.47□□□□□ -0.73
FAM3A-221ENST00000612856 TUBA1BP68363 451 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 SCAPQ12770 1279 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 CAMK2BQ13554 666 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 CDKN3Q16667 212 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 Q6ZSR6 202 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 SH2D5Q6ZV89 423 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 TUBA1AQ71U36 451 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 OR5AK3PQ8NH89 298 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 BIRC7Q96CA5 298 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 RTP4Q96DX8 246 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 CRISPLD2Q9H0B8 497 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 TRIM45Q9H8W5 580 aaPredicted RBP10.47□□□□□ -0.73
FAM3A-221ENST00000612856 NANOGQ9H9S0 305 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 MRPS30Q9NP92 439 aaKnown RBP10.47□□□□□ -0.73
FAM3A-221ENST00000612856 MUTYHQ9UIF7 546 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 LOC285556D6RIA3 1793 aa10.47□□□□□ -0.73
FAM3A-221ENST00000612856 SDK2Q58EX2 2172 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms