RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 NUDT8Q8WV74 236 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 STARD8Q92502 1023 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 JADE3Q92613 823 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 EGLN2Q96KS0 407 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 HSPA12BQ96MM6 686 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 EBPLQ9BY08 206 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 OR51B5Q9H339 312 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 SRMSQ9H3Y6 488 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 SLC24A3Q9HC58 644 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 POT1Q9NUX5 634 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 AHSPQ9NZD4 102 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 ABCD2Q9UBJ2 740 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 CPNE7Q9UBL6 633 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 CD300AQ9UGN4 299 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 APOBEC3BQ9UH17 382 aaKnown RBP8.54□□□□□ -1.04
CCDC47-207ENST00000612558 PACSIN3Q9UKS6 424 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 SPAG17Q6Q759 2223 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 SDK1Q7Z5N4 2213 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 SNRNP200O75643 2136 aaKnown RBP8.53□□□□□ -1.04
CCDC47-207ENST00000612558 C15orf38-AP3S2A0A0A6YYH1 394 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 IGKV1-8A0A0C4DH67 115 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 CCDC163A0A0D9SF12 145 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 GNG14A0A1W2PPG7 69 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 TRBC2A0A5B9 178 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 FEZF1A0PJY2 475 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 PRORSD1PA6NEY8 169 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 ISM1B1AKI9 464 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 BTN3A3O00478 584 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 OR1F1O43749 312 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 PCDH7O60245 1069 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 FKBP6O75344 327 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 SEMA3DO95025 777 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 KCNH1O95259 989 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 PSMG1O95456 288 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 NME1P15531 152 aaKnown RBP8.53□□□□□ -1.04
CCDC47-207ENST00000612558 GSTM2P28161 218 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 PEBP1P30086 187 aaKnown RBP8.53□□□□□ -1.04
CCDC47-207ENST00000612558 S100A3P33764 101 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 UBE2IP63279 158 aaKnown RBP8.53□□□□□ -1.04
CCDC47-207ENST00000612558 TRAP1Q12931 704 aaKnown RBP8.53□□□□□ -1.04
CCDC47-207ENST00000612558 PWP1Q13610 501 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 TRIM25Q14258 630 aaKnown RBP8.53□□□□□ -1.04
CCDC47-207ENST00000612558 GPR18Q14330 331 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 CAPRIN1Q14444 709 aaKnown RBP8.53□□□□□ -1.04
CCDC47-207ENST00000612558 PLCL1Q15111 1095 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 CCDC6Q16204 474 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 PRRT3Q5FWE3 981 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 DEPDC1Q5TB30 811 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 KHDRBS2Q5VWX1 349 aaKnown RBP8.53□□□□□ -1.04
CCDC47-207ENST00000612558 AAGABQ6PD74 315 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 DLEU7Q6UYE1 221 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 MSANTD1Q6ZTZ1 278 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 ARMCX6Q7L4S7 300 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 COMMD6Q7Z4G1 85 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 ADCK2Q7Z695 626 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 ARPINQ7Z6K5 226 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 SLC9B2Q86UD5 537 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 GPR180Q86V85 440 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 RBM12BQ8IXT5 1001 aaKnown RBP8.53□□□□□ -1.04
CCDC47-207ENST00000612558 ADGRF3Q8IZF5 1079 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 TBC1D19Q8N5T2 526 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 RNF148Q8N7C7 305 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 ANKRD53Q8N9V6 530 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 C1orf216Q8TAB5 229 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 DNAJB14Q8TBM8 379 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 JPH3Q8WXH2 748 aaPredicted RBP8.53□□□□□ -1.04
CCDC47-207ENST00000612558 DNASE2BQ8WZ79 361 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 GTF2H4Q92759 462 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 ASB9Q96DX5 294 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 OR52E6Q96RD3 313 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 SLC39A3Q9BRY0 314 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 DPH7Q9BTV6 452 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 LRRC61Q9BV99 259 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 SARGQ9BW04 601 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 TWSG1Q9GZX9 223 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 ZMYND15Q9H091 742 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 MIR1-1HGQ9H1L0 117 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 DUSP15Q9H1R2 295 aaPredicted RBP8.53□□□□□ -1.04
CCDC47-207ENST00000612558 RMND5AQ9H871 391 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 TM9SF3Q9HD45 589 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 SPHK1Q9NYA1 384 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 SLAMF8Q9P0V8 285 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 DLGAP2Q9P1A6 1054 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 SUCOQ9UBS9 1254 aaKnown RBP8.53□□□□□ -1.04
CCDC47-207ENST00000612558 SNX7Q9UNH6 387 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 L3MBTL1Q9Y468 752 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 PCDHA9Q9Y5H5 950 aa8.53□□□□□ -1.04
CCDC47-207ENST00000612558 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 FAM221BA6H8Z2 402 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 H0Y3Z8 333 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 NME4O00746 187 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 ACOT8O14734 319 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 LCMT2O60294 686 aaKnown RBP8.52□□□□□ -1.04
CCDC47-207ENST00000612558 CLEC3AO75596 197 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 BCAS2O75934 225 aaPredicted RBP8.52□□□□□ -1.04
CCDC47-207ENST00000612558 KRT36O76013 467 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 LRATO95237 230 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 TCN1P20061 433 aaPredicted RBP8.52□□□□□ -1.04
CCDC47-207ENST00000612558 BCKDHBP21953 392 aa8.52□□□□□ -1.04
CCDC47-207ENST00000612558 KIR3DL1P43629 444 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms