RNA–Protein interactions for RNA: ENST00000610488.4

PPHLN1-223, Transcript of periphilin 1, human

TSL 5 BASIC

Gene PPHLN1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPHLN1-223	ENST00000610488	ZNF480	Q8WV37	535 aa		13	□□□□□ -0.33
PPHLN1-223	ENST00000610488	KIAA1143	Q96AT1	154 aa	Predicted RBP	13	□□□□□ -0.33
PPHLN1-223	ENST00000610488	TEFM	Q96QE5	360 aa	Known RBP	13	□□□□□ -0.33
PPHLN1-223	ENST00000610488	CCT7	Q99832	543 aa		13	□□□□□ -0.33
PPHLN1-223	ENST00000610488	LRMDA	Q9H2I8	198 aa		13	□□□□□ -0.33
PPHLN1-223	ENST00000610488	INTS7	Q9NVH2	962 aa	Known RBP	13	□□□□□ -0.33
PPHLN1-223	ENST00000610488	RIC8B	Q9NVN3	520 aa		13	□□□□□ -0.33
PPHLN1-223	ENST00000610488	PDP2	Q9P2J9	529 aa		13	□□□□□ -0.33
PPHLN1-223	ENST00000610488	TDRKH	Q9Y2W6	561 aa	Known RBP	13	□□□□□ -0.33
PPHLN1-223	ENST00000610488	CFAP20	Q9Y6A4	193 aa	Known RBP	13	□□□□□ -0.33
PPHLN1-223	ENST00000610488	CFAP73	A6NFT4	308 aa		12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	LILRA5	A6NI73	299 aa		12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	ZNF891	A8MT65	544 aa	Predicted RBP	12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	SLC22A2	O15244	555 aa		12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	PRKAR1A	P10644	381 aa		12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	SFTPC	P11686	197 aa		12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	AMD1	P17707	334 aa		12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	IDS	P22304	550 aa		12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	PIK3R1	P27986	724 aa		12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	PRDX6	P30041	224 aa		12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	ADSL	P30566	484 aa	Predicted RBP	12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	HAL	P42357	657 aa		12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	UBE2I	P63279	158 aa	Known RBP	12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	FOXM1	Q08050	763 aa		12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	TSTA3	Q13630	321 aa	Predicted RBP	12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	GRB7	Q14451	532 aa		12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	SQLE	Q14534	574 aa		12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	CAPRIN2	Q6IMN6	1127 aa	Known RBP	12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	BORA	Q6PGQ7	559 aa		12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	RINL	Q6ZS11	566 aa		12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	PLXDC1	Q8IUK5	500 aa		12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	OR2T11	Q8NH01	316 aa		12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	RAD51AP1	Q96B01	352 aa		12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	CMTM5	Q96DZ9	223 aa		12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	C12orf66	Q96MD2	445 aa		12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	TGM7	Q96PF1	710 aa		12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	SLC29A3	Q9BZD2	475 aa		12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	TRIT1	Q9H3H1	467 aa	Known RBP	12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	EPB41L1	Q9H4G0	881 aa		12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	CLMP	Q9H6B4	373 aa		12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	GPN2	Q9H9Y4	310 aa	Predicted RBP	12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	PILRA	Q9UKJ1	303 aa		12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	PLAGL1	Q9UM63	463 aa		12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	WDR37	Q9Y2I8	494 aa		12.99	□□□□□ -0.33
PPHLN1-223	ENST00000610488	MN1	Q10571	1320 aa	Predicted RBP	12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488		B2RBV5	119 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488		H0YHG0	523 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	MANBA	O00462	879 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	CLGN	O14967	610 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	POLR1C	O15160	346 aa	Predicted RBP	12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	PEX11A	O75192	247 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	RASSF9	O75901	435 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	STK17B	O94768	372 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	UBXN7	O94888	489 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	ALDOC	P09972	364 aa	Known RBP	12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	COX4I1	P13073	169 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	NQO1	P15559	274 aa	Known RBP	12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	SEPHS1	P49903	392 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	PNLIPRP1	P54315	467 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	TBPL1	P62380	186 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	KCNJ2	P63252	427 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	KCNC4	Q03721	635 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	CHIT1	Q13231	466 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	PRKG2	Q13237	762 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	ABRAXAS2	Q15018	415 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	CPSF6	Q16630	551 aa	Known RBP eCLIP	12.98	□□□□□ -0.33	9e-10	■■■■■ 34.4
PPHLN1-223	ENST00000610488	GGTA1P	Q4G0N0	100 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	SGO1	Q5FBB7	561 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	CAPN13	Q6MZZ7	669 aa	Predicted RBP	12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	DUS1L	Q6P1R4	473 aa	Known RBP	12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	TMEM26	Q6ZUK4	368 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	LMNTD1	Q8N9Z9	388 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	L3MBTL4	Q8NA19	623 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	OR5K2	Q8NHB8	316 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	CXorf40B	Q96DE9	158 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	MAGEB10	Q96LZ2	347 aa	Predicted RBP	12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	OR4K3	Q96R72	315 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	FERD3L	Q96RJ6	166 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	INSM2	Q96T92	566 aa	Predicted RBP	12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	HBEGF	Q99075	208 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	STARD5	Q9NSY2	213 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	MRGBP	Q9NV56	204 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	ZNF490	Q9ULM2	529 aa	Predicted RBP	12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	MYO18B	Q8IUG5	2567 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	KCNE1B	A0A087WTH5	132 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	LOC100653049	A0A140TA62	436 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	LOC101059948	A0A1B0GTJ6	334 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	PRR19	A6NJB7	356 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	OR52A4P	A6NMU1	304 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488		E7EQ34	232 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	GYG2	O15488	501 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	PRAMEF4	O60810	478 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	ULK1	O75385	1050 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	KRT34	O76011	436 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	KRT6A	P02538	564 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	KRT6B	P04259	564 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	PRR35	P0CG20	571 aa		12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	EZR	P15311	586 aa	Known RBP	12.98	□□□□□ -0.33
PPHLN1-223	ENST00000610488	SLC19A1	P41440	591 aa		12.98	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms