RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	SARG	Q9BW04	601 aa		20.96	■□□□□ 0.95
LTBP4-227	ENST00000600026	TNFRSF12A	Q9NP84	129 aa		20.96	■□□□□ 0.95
LTBP4-227	ENST00000600026	PFDN4	Q9NQP4	134 aa		20.96	■□□□□ 0.95
LTBP4-227	ENST00000600026	PNPO	Q9NVS9	261 aa		20.96	■□□□□ 0.95
LTBP4-227	ENST00000600026	ADGRE2	Q9UHX3	823 aa		20.96	■□□□□ 0.95
LTBP4-227	ENST00000600026	SERTAD3	Q9UJW9	196 aa		20.96	■□□□□ 0.95
LTBP4-227	ENST00000600026	TIMM22	Q9Y584	194 aa		20.96	■□□□□ 0.95
LTBP4-227	ENST00000600026	SPTB	P11277	2137 aa		20.96	■□□□□ 0.95
LTBP4-227	ENST00000600026	BAHCC1	Q9P281	2608 aa		20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	FEZF1	A0PJY2	475 aa		20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	ANKDD1B	A6NHY2	528 aa		20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	C1QTNF9B	B2RNN3	333 aa		20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	MANBA	O00462	879 aa		20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	ULK1	O75385	1050 aa		20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	OR2B3	O76000	313 aa		20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	C1QTNF9	P0C862	333 aa		20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	KIT	P10721	976 aa		20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	ZNF28	P17035	718 aa		20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	GSTM2	P28161	218 aa		20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	SERPINB1	P30740	379 aa		20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	FOXA1	P55317	472 aa		20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	FRG2	Q64ET8	278 aa		20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	UNQ6494/PRO21346	Q6UXR6	183 aa		20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	WDR75	Q8IWA0	830 aa	Known RBP	20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	LAS2	Q8IYD9	372 aa		20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	LRRC34	Q8IZ02	419 aa		20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	ZNF740	Q8NDX6	193 aa		20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	CCT6B	Q92526	530 aa		20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	ZNF285	Q96NJ3	590 aa		20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	FRG2B	Q96QU4	278 aa		20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	OR2A5	Q96R48	311 aa		20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	SPRTN	Q9H040	489 aa	Predicted RBP	20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	NSRP1	Q9H0G5	558 aa	Known RBP	20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	CCDC86	Q9H6F5	360 aa	Known RBP	20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	IRAK4	Q9NWZ3	460 aa		20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	VTI1B	Q9UEU0	232 aa		20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	MARCO	Q9UEW3	520 aa	Predicted RBP	20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	ZNF490	Q9ULM2	529 aa	Predicted RBP	20.95	■□□□□ 0.94
LTBP4-227	ENST00000600026	LOC105369274	A0A096LPK9	316 aa		20.94	■□□□□ 0.94
LTBP4-227	ENST00000600026	LOC102723532	A0A0G2JNH3	316 aa		20.94	■□□□□ 0.94
LTBP4-227	ENST00000600026	GMNC	A6NCL1	334 aa		20.94	■□□□□ 0.94
LTBP4-227	ENST00000600026	TMEM233	B4DJY2	109 aa		20.94	■□□□□ 0.94
LTBP4-227	ENST00000600026		H0YGG7	62 aa		20.94	■□□□□ 0.94
LTBP4-227	ENST00000600026	SCRG1	O75711	98 aa		20.94	■□□□□ 0.94
LTBP4-227	ENST00000600026	KIAA0754	O94854	1291 aa		20.94	■□□□□ 0.94
LTBP4-227	ENST00000600026	SERPINB3	P29508	390 aa		20.94	■□□□□ 0.94
LTBP4-227	ENST00000600026	AHR	P35869	848 aa		20.94	■□□□□ 0.94
LTBP4-227	ENST00000600026	BCL6	P41182	706 aa		20.94	■□□□□ 0.94
LTBP4-227	ENST00000600026	SCTR	P47872	440 aa		20.94	■□□□□ 0.94
LTBP4-227	ENST00000600026	VSX2	P58304	361 aa	Predicted RBP	20.94	■□□□□ 0.94
LTBP4-227	ENST00000600026	ARF3	P61204	181 aa	Predicted RBP	20.94	■□□□□ 0.94
LTBP4-227	ENST00000600026	ZNF33B	Q06732	778 aa		20.94	■□□□□ 0.94
LTBP4-227	ENST00000600026	PRAMEF17	Q5VTA0	474 aa		20.94	■□□□□ 0.94
LTBP4-227	ENST00000600026	TMEM126B	Q8IUX1	230 aa		20.94	■□□□□ 0.94
LTBP4-227	ENST00000600026	GPR135	Q8IZ08	494 aa		20.94	■□□□□ 0.94
LTBP4-227	ENST00000600026	OR4N4	Q8N0Y3	316 aa		20.94	■□□□□ 0.94
LTBP4-227	ENST00000600026	MFSD9	Q8NBP5	474 aa		20.94	■□□□□ 0.94
LTBP4-227	ENST00000600026	OR7G3	Q8NG95	312 aa		20.94	■□□□□ 0.94
LTBP4-227	ENST00000600026	SELENOM	Q8WWX9	145 aa		20.94	■□□□□ 0.94
LTBP4-227	ENST00000600026	SEC16B	Q96JE7	1060 aa		20.94	■□□□□ 0.94
LTBP4-227	ENST00000600026	ZNF317	Q96PQ6	595 aa	Predicted RBP	20.94	■□□□□ 0.94
LTBP4-227	ENST00000600026	FGFR1OP2	Q9NVK5	253 aa		20.94	■□□□□ 0.94
LTBP4-227	ENST00000600026	DKK4	Q9UBT3	224 aa		20.94	■□□□□ 0.94
LTBP4-227	ENST00000600026	TSC22D4	Q9Y3Q8	395 aa		20.94	■□□□□ 0.94
LTBP4-227	ENST00000600026	ZSCAN9	O15535	394 aa	Predicted RBP	20.93	■□□□□ 0.94
LTBP4-227	ENST00000600026	LCMT2	O60294	686 aa	Known RBP	20.93	■□□□□ 0.94
LTBP4-227	ENST00000600026	SRPX2	O60687	465 aa	Predicted RBP	20.93	■□□□□ 0.94
LTBP4-227	ENST00000600026	STK17B	O94768	372 aa		20.93	■□□□□ 0.94
LTBP4-227	ENST00000600026	TROVE2	P10155	538 aa	Known RBP eCLIP	20.93	■□□□□ 0.94
LTBP4-227	ENST00000600026	CD82	P27701	267 aa		20.93	■□□□□ 0.94
LTBP4-227	ENST00000600026	SGO1	Q5FBB7	561 aa		20.93	■□□□□ 0.94
LTBP4-227	ENST00000600026	TCTE1	Q5JU00	501 aa		20.93	■□□□□ 0.94
LTBP4-227	ENST00000600026	TRPV3	Q8NET8	790 aa		20.93	■□□□□ 0.94
LTBP4-227	ENST00000600026	WDR20	Q8TBZ3	569 aa		20.93	■□□□□ 0.94
LTBP4-227	ENST00000600026	TWIST2	Q8WVJ9	160 aa		20.93	■□□□□ 0.94
LTBP4-227	ENST00000600026	RERG	Q96A58	199 aa	Predicted RBP	20.93	■□□□□ 0.94
LTBP4-227	ENST00000600026	MTFMT	Q96DP5	389 aa	Known RBP	20.93	■□□□□ 0.94
LTBP4-227	ENST00000600026	CCT7	Q99832	543 aa		20.93	■□□□□ 0.94
LTBP4-227	ENST00000600026	ULBP3	Q9BZM4	244 aa		20.93	■□□□□ 0.94
LTBP4-227	ENST00000600026	RHBG	Q9H310	441 aa		20.93	■□□□□ 0.94
LTBP4-227	ENST00000600026	ZFP69B	Q9UJL9	534 aa		20.93	■□□□□ 0.94
LTBP4-227	ENST00000600026	ACSL6	Q9UKU0	697 aa		20.93	■□□□□ 0.94
LTBP4-227	ENST00000600026	TMEM184B	Q9Y519	407 aa	Predicted RBP	20.93	■□□□□ 0.94
LTBP4-227	ENST00000600026	PCDHGA4	Q9Y5G9	962 aa		20.93	■□□□□ 0.94
LTBP4-227	ENST00000600026	AP1M2	Q9Y6Q5	423 aa		20.93	■□□□□ 0.94
LTBP4-227	ENST00000600026	SRRM3	A6NNA2	597 aa	Predicted RBP	20.92	■□□□□ 0.94
LTBP4-227	ENST00000600026	HDAC3	O15379	428 aa		20.92	■□□□□ 0.94
LTBP4-227	ENST00000600026	SKAP2	O75563	359 aa	Predicted RBP	20.92	■□□□□ 0.94
LTBP4-227	ENST00000600026	TGDS	O95455	350 aa		20.92	■□□□□ 0.94
LTBP4-227	ENST00000600026	DLGAP3	O95886	979 aa		20.92	■□□□□ 0.94
LTBP4-227	ENST00000600026	CAPNS1	P04632	268 aa		20.92	■□□□□ 0.94
LTBP4-227	ENST00000600026	EIF2S1	P05198	315 aa	Known RBP	20.92	■□□□□ 0.94
LTBP4-227	ENST00000600026	PIK3CB	P42338	1070 aa		20.92	■□□□□ 0.94
LTBP4-227	ENST00000600026	DDX39B	Q13838	428 aa	Known RBP	20.92	■□□□□ 0.94
LTBP4-227	ENST00000600026	UGT3A2	Q3SY77	523 aa		20.92	■□□□□ 0.94
LTBP4-227	ENST00000600026	TCHHL1	Q5QJ38	904 aa	Predicted RBP	20.92	■□□□□ 0.94
LTBP4-227	ENST00000600026	WASHC2D	Q5SRD0	308 aa		20.92	■□□□□ 0.94
LTBP4-227	ENST00000600026	TLDC1	Q6P9B6	456 aa		20.92	■□□□□ 0.94
LTBP4-227	ENST00000600026	VN1R4	Q7Z5H5	301 aa		20.92	■□□□□ 0.94
LTBP4-227	ENST00000600026	ZFAND4	Q86XD8	727 aa		20.92	■□□□□ 0.94

Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms