RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 RDH16O75452 317 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 WISP3O95389 354 aaPredicted RBP14.23□□□□□ -0.13
LIG1-215ENST00000597901 C1QAP02745 245 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 CYC1P08574 325 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 GSTA2P09210 222 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 ALOX12P18054 663 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 IL10P22301 178 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 SOX11P35716 441 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 AHRP35869 848 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 GDF5P43026 501 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 MAGEA4P43358 317 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 TSFMP43897 325 aaKnown RBP14.23□□□□□ -0.13
LIG1-215ENST00000597901 ZNF169Q14929 603 aaPredicted RBP14.23□□□□□ -0.13
LIG1-215ENST00000597901 HERC3Q15034 1050 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 RBBP5Q15291 538 aaKnown RBP14.23□□□□□ -0.13
LIG1-215ENST00000597901 NR6A1Q15406 480 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 C18orf21Q32NC0 220 aaPredicted RBP14.23□□□□□ -0.13
LIG1-215ENST00000597901 RIPOR1Q6ZS17 1223 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 CPEB2Q7Z5Q1 589 aaKnown RBP14.23□□□□□ -0.13
LIG1-215ENST00000597901 ADAMTSL2Q86TH1 951 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 CTAGE6Q86UF2 777 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 SIRT6Q8N6T7 355 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 ANKRD53Q8N9V6 530 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 PLPP5Q8NEB5 264 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 OR5T3Q8NGG3 340 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 PRR7Q8TB68 274 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 NT5CQ8TCD5 201 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 HAS2Q92819 552 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 RHBDF1Q96CC6 855 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 TSPAN17Q96FV3 270 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 PEX11GQ96HA9 241 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 CNDP1Q96KN2 507 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 AIF1LQ9BQI0 150 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 UNKQ9C0B0 810 aaKnown RBP14.23□□□□□ -0.13
LIG1-215ENST00000597901 DERL2Q9GZP9 239 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 RAB17Q9H0T7 212 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 PELI2Q9HAT8 420 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 BLACEA4D250 179 aa14.22□□□□□ -0.13
LIG1-215ENST00000597901 ZNF860A6NHJ4 632 aa14.22□□□□□ -0.13
LIG1-215ENST00000597901 PHGDHO43175 533 aaKnown RBP14.22□□□□□ -0.13
LIG1-215ENST00000597901 CHST10O43529 356 aa14.22□□□□□ -0.13
LIG1-215ENST00000597901 SEMA7AO75326 666 aa14.22□□□□□ -0.13
LIG1-215ENST00000597901 B3GALT4O96024 378 aa14.22□□□□□ -0.13
LIG1-215ENST00000597901 CCDC166P0CW27 439 aa14.22□□□□□ -0.13
LIG1-215ENST00000597901 C1GALT1C1LP0DN25 315 aa14.22□□□□□ -0.13
LIG1-215ENST00000597901 ITGAMP11215 1152 aa14.22□□□□□ -0.13
LIG1-215ENST00000597901 GP5P40197 560 aa14.22□□□□□ -0.13
LIG1-215ENST00000597901 REEP5Q00765 189 aa14.22□□□□□ -0.13
LIG1-215ENST00000597901 RGS1Q08116 209 aa14.22□□□□□ -0.13
LIG1-215ENST00000597901 CDC16Q13042 620 aa14.22□□□□□ -0.13
LIG1-215ENST00000597901 DEFB134Q4QY38 66 aa14.22□□□□□ -0.13
LIG1-215ENST00000597901 GRTP1Q5TC63 336 aa14.22□□□□□ -0.13
LIG1-215ENST00000597901 B3GNTL1Q67FW5 361 aaPredicted RBP14.22□□□□□ -0.13
LIG1-215ENST00000597901 ZDHHC24Q6UX98 284 aa14.22□□□□□ -0.13
LIG1-215ENST00000597901 LANCL3Q6ZV70 420 aa14.22□□□□□ -0.13
LIG1-215ENST00000597901 FRA10AC1Q70Z53 315 aa14.22□□□□□ -0.13
LIG1-215ENST00000597901 ZNF572Q7Z3I7 529 aaPredicted RBP14.22□□□□□ -0.13
LIG1-215ENST00000597901 ANKRD37Q7Z713 158 aa14.22□□□□□ -0.13
LIG1-215ENST00000597901 KLHDC8AQ8IYD2 350 aa14.22□□□□□ -0.13
LIG1-215ENST00000597901 TRPV3Q8NET8 790 aa14.22□□□□□ -0.13
LIG1-215ENST00000597901 OR1N1Q8NGS0 311 aa14.22□□□□□ -0.13
LIG1-215ENST00000597901 FBXO25Q8TCJ0 367 aa14.22□□□□□ -0.13
LIG1-215ENST00000597901 UTP15Q8TED0 518 aaKnown RBP14.22□□□□□ -0.13
LIG1-215ENST00000597901 GPR22Q99680 433 aa14.22□□□□□ -0.13
LIG1-215ENST00000597901 RBBP8Q99708 897 aa14.22□□□□□ -0.13
LIG1-215ENST00000597901 AGPAT4Q9NRZ5 378 aa14.22□□□□□ -0.13
LIG1-215ENST00000597901 STMN3Q9NZ72 180 aa14.22□□□□□ -0.13
LIG1-215ENST00000597901 C19orf25Q9UFG5 118 aaPredicted RBP14.22□□□□□ -0.13
LIG1-215ENST00000597901 DYTNA2CJ06 578 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 TAPBPO15533 448 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 SEC24DO94855 1032 aaPredicted RBP14.21□□□□□ -0.13
LIG1-215ENST00000597901 WDR47O94967 919 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 ZNF888P0CJ79 500 aaPredicted RBP14.21□□□□□ -0.13
LIG1-215ENST00000597901 SMIM10L1P0DMW3 83 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 CD1DP15813 335 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 STMN1P16949 149 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 SPRP35270 261 aaPredicted RBP14.21□□□□□ -0.13
LIG1-215ENST00000597901 HNF4AP41235 474 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 SLC6A12P48065 614 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 AGTR2P50052 363 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 RAB8AP61006 207 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 AP2B1P63010 937 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 ARG2P78540 354 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 RHAGQ02094 409 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 ACTN3Q08043 901 aaPredicted RBP14.21□□□□□ -0.13
LIG1-215ENST00000597901 HYAL2Q12891 473 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 TGFBIQ15582 683 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 NSDHLQ15738 373 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 NIPAL1Q6NVV3 410 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 RPUSD3Q6P087 351 aaKnown RBP14.21□□□□□ -0.13
LIG1-215ENST00000597901 SLCO4C1Q6ZQN7 724 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 TMPRSS11BQ86T26 416 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 CCDC25Q86WR0 208 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 GPSM1Q86YR5 675 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 CTAGE3PQ8IX95 158 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 PPM1NQ8N819 430 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 CREB3L4Q8TEY5 395 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 SMIM10Q96HG1 83 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 OR1F2PQ96R84 312 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 PHACTR1Q9C0D0 580 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms