RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 PCOLCEQ15113 449 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 WHAMMP3Q1A5X7 153 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 KBTBD12Q3ZCT8 623 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 FAAH2Q6GMR7 532 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 SLCO4C1Q6ZQN7 724 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 FRA10AC1Q70Z53 315 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 CUZD1Q86UP6 607 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 CCDC25Q86WR0 208 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 GPSM1Q86YR5 675 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 CTAGE3PQ8IX95 158 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 TCAIMQ8N3R3 496 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 FAM26EQ8N5C1 309 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 PPM1NQ8N819 430 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 ANKRD53Q8N9V6 530 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 PLPP5Q8NEB5 264 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 DNAJB14Q8TBM8 379 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 FBF1Q8TES7 1133 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 SMIM10Q96HG1 83 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 TSNARE1Q96NA8 513 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 OR1F2PQ96R84 312 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 LRRC1Q9BTT6 524 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 TUBB6Q9BUF5 446 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 PITHD1Q9GZP4 211 aaPredicted RBP9.94□□□□□ -0.82
CCDC9-203ENST00000596938 ILKAPQ9H0C8 392 aaPredicted RBP9.94□□□□□ -0.82
CCDC9-203ENST00000596938 EPS8L2Q9H6S3 715 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 CNOT10Q9H9A5 744 aaKnown RBP9.94□□□□□ -0.82
CCDC9-203ENST00000596938 ZDHHC18Q9NUE0 388 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 LUZP4Q9P127 313 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 PCDHGA10Q9Y5H3 936 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 COPG1Q9Y678 874 aaKnown RBP9.94□□□□□ -0.82
CCDC9-203ENST00000596938 URADA6NGE7 173 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 TCP11X1B4DZS4 312 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 TAPBPO15533 448 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 PHGDHO43175 533 aaKnown RBP9.93□□□□□ -0.82
CCDC9-203ENST00000596938 WFS1O76024 890 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 URI1O94763 535 aaPredicted RBP9.93□□□□□ -0.82
CCDC9-203ENST00000596938 WDR47O94967 919 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 SERPINA6P08185 405 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 GNLYP22749 145 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 GSTM2P28161 218 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 CRABP2P29373 138 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 SOX11P35716 441 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 GDF5P43026 501 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 AGTR2P50052 363 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 SLC7A5Q01650 507 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 EEF1A2Q05639 463 aaKnown RBP9.93□□□□□ -0.82
CCDC9-203ENST00000596938 SRSF1Q07955 248 aaKnown RBP eCLIP9.93□□□□□ -0.82
CCDC9-203ENST00000596938 RBBP5Q15291 538 aaKnown RBP9.93□□□□□ -0.82
CCDC9-203ENST00000596938 TLR1Q15399 786 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 PRR30Q53SZ7 412 aaPredicted RBP9.93□□□□□ -0.82
CCDC9-203ENST00000596938 B3GNTL1Q67FW5 361 aaPredicted RBP9.93□□□□□ -0.82
CCDC9-203ENST00000596938 SULT1C3Q6IMI6 304 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 ABHD13Q7L211 337 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 CPEB2Q7Z5Q1 589 aaKnown RBP9.93□□□□□ -0.82
CCDC9-203ENST00000596938 RELL1Q8IUW5 271 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 SPATA6LQ8N4H0 392 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 MMGT1Q8N4V1 131 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 CISD2Q8N5K1 135 aaKnown RBP9.93□□□□□ -0.82
CCDC9-203ENST00000596938 TTLQ8NG68 377 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 ZCCHC10Q8TBK6 192 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 UTP15Q8TED0 518 aaKnown RBP9.93□□□□□ -0.82
CCDC9-203ENST00000596938 CREB3L4Q8TEY5 395 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 HAS2Q92819 552 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 KIAA1191Q96A73 305 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 C19orf60Q96EN9 201 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 SEC16BQ96JE7 1060 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 SLC29A3Q9BZD2 475 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 SLC6A16Q9GZN6 736 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 SPNS1Q9H2V7 528 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 NT5DC2Q9H857 520 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 GPRC5BQ9NZH0 403 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 HCN3Q9P1Z3 774 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 COPG2Q9UBF2 871 aa9.93□□□□□ -0.82
CCDC9-203ENST00000596938 C19orf25Q9UFG5 118 aaPredicted RBP9.93□□□□□ -0.82
CCDC9-203ENST00000596938 NBASA2RRP1 2371 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 CTAGE15A4D2H0 777 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 MAGEB17A8MXT2 336 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 CHST10O43529 356 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 DNAJB6O75190 326 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 RDH16O75452 317 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 STK16O75716 305 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 FAM155BO75949 473 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 CBX6O95503 412 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 SERPIND1P05546 499 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 TSFMP43897 325 aaKnown RBP9.92□□□□□ -0.82
CCDC9-203ENST00000596938 GLRBP48167 497 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 KCNC1P48547 511 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 RHAGQ02094 409 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 HYAL2Q12891 473 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 CDC16Q13042 620 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 ZNF169Q14929 603 aaPredicted RBP9.92□□□□□ -0.82
CCDC9-203ENST00000596938 OR4D1Q15615 310 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 NSDHLQ15738 373 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 C18orf21Q32NC0 220 aaPredicted RBP9.92□□□□□ -0.82
CCDC9-203ENST00000596938 MINDY4Q4G0A6 757 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 DEFB134Q4QY38 66 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 PLAG1Q6DJT9 500 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 H3F3CQ6NXT2 135 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 C8orf74Q6P047 294 aa9.92□□□□□ -0.82
CCDC9-203ENST00000596938 RPUSD3Q6P087 351 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms