RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 MMAAQ8IVH4 418 aaKnown RBP18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 PPCDCQ96CD2 204 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 DPH2Q9BQC3 489 aaPredicted RBP18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 OR52A5Q9H2C5 316 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 TRIT1Q9H3H1 467 aaKnown RBP18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 LIN28AQ9H9Z2 209 aaKnown RBP18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 FANCEQ9HB96 536 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 VNN3Q9NY84 501 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 AHSPQ9NZD4 102 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 ASF1AQ9Y294 204 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 DNMT3AQ9Y6K1 912 aaPredicted RBP18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 DNAJB5O75953 348 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 TGFB1P01137 390 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 CDK4P11802 303 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 IL7RP16871 459 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 ITGA1P56199 1179 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 RBBP4Q09028 425 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 C2orf80Q0P641 193 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 DCTN2Q13561 401 aaKnown RBP18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 PDE7AQ13946 482 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 KEAP1Q14145 624 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 ANKRD34AQ69YU3 496 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 KDM4DQ6B0I6 523 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 XKR5Q6UX68 686 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 IKBIPQ70UQ0 350 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 ARMCX6Q7L4S7 300 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 CHST15Q7LFX5 561 aaPredicted RBP18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 DCUN1D3Q8IWE4 304 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 C16orf78Q8WTQ4 265 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 COX14Q96I36 57 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 SFXN1Q9H9B4 322 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 GDE1Q9NZC3 331 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 SH2B3Q9UQQ2 575 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 SAMHD1Q9Y3Z3 626 aaKnown RBP18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 H3BMQ9 156 aa18.4■□□□□ 0.54
PRKCSH-209ENST00000589838 hCG_2039718K7EN88 272 aa18.4■□□□□ 0.54
PRKCSH-209ENST00000589838 B4GAT1O43505 415 aa18.4■□□□□ 0.54
PRKCSH-209ENST00000589838 GPR37L1O60883 481 aa18.4■□□□□ 0.54
PRKCSH-209ENST00000589838 SEC14L2O76054 403 aa18.4■□□□□ 0.54
PRKCSH-209ENST00000589838 FURINP09958 794 aa18.4■□□□□ 0.54
PRKCSH-209ENST00000589838 EFNA1P20827 205 aaPredicted RBP18.4■□□□□ 0.54
PRKCSH-209ENST00000589838 P2RY2P41231 377 aa18.4■□□□□ 0.54
PRKCSH-209ENST00000589838 VLDLRP98155 873 aa18.4■□□□□ 0.54
PRKCSH-209ENST00000589838 ELOAQ14241 798 aaKnown RBP18.4■□□□□ 0.54
PRKCSH-209ENST00000589838 ARHGAP19Q14CB8 494 aa18.4■□□□□ 0.54
PRKCSH-209ENST00000589838 VTCN1Q7Z7D3 282 aa18.4■□□□□ 0.54
PRKCSH-209ENST00000589838 FBLIM1Q8WUP2 373 aa18.4■□□□□ 0.54
PRKCSH-209ENST00000589838 FGF13Q92913 245 aa18.4■□□□□ 0.54
PRKCSH-209ENST00000589838 ZNF566Q969W8 418 aa18.4■□□□□ 0.54
PRKCSH-209ENST00000589838 COG8Q96MW5 612 aa18.4■□□□□ 0.54
PRKCSH-209ENST00000589838 TRPV4Q9HBA0 871 aa18.4■□□□□ 0.54
PRKCSH-209ENST00000589838 PDP1Q9P0J1 537 aaPredicted RBP18.4■□□□□ 0.54
PRKCSH-209ENST00000589838 SPASTQ9UBP0 616 aa18.4■□□□□ 0.54
PRKCSH-209ENST00000589838 OTOL1A6NHN0 477 aaPredicted RBP18.39■□□□□ 0.54
PRKCSH-209ENST00000589838 JRKO75564 520 aa18.39■□□□□ 0.54
PRKCSH-209ENST00000589838 C1QCP02747 245 aa18.39■□□□□ 0.54
PRKCSH-209ENST00000589838 CXCR2P25025 360 aa18.39■□□□□ 0.54
PRKCSH-209ENST00000589838 POLR2IP36954 125 aaKnown RBP18.39■□□□□ 0.54
PRKCSH-209ENST00000589838 FCHO2Q0JRZ9 810 aa18.39■□□□□ 0.54
PRKCSH-209ENST00000589838 CTU2Q2VPK5 515 aaKnown RBP18.39■□□□□ 0.54
PRKCSH-209ENST00000589838 FAM71E1Q6IPT2 247 aa18.39■□□□□ 0.54
PRKCSH-209ENST00000589838 PNCKQ6P2M8 343 aa18.39■□□□□ 0.54
PRKCSH-209ENST00000589838 TMIGD1Q6UXZ0 262 aa18.39■□□□□ 0.54
PRKCSH-209ENST00000589838 CEP68Q76N32 757 aa18.39■□□□□ 0.54
PRKCSH-209ENST00000589838 C11orf96Q7Z7L8 435 aa18.39■□□□□ 0.54
PRKCSH-209ENST00000589838 LRRTM4Q86VH4 590 aa18.39■□□□□ 0.54
PRKCSH-209ENST00000589838 CYP4Z1Q86W10 505 aa18.39■□□□□ 0.54
PRKCSH-209ENST00000589838 SPARTQ8N0X7 666 aa18.39■□□□□ 0.54
PRKCSH-209ENST00000589838 NAGSQ8N159 534 aa18.39■□□□□ 0.54
PRKCSH-209ENST00000589838 OR52N2Q8NGI0 321 aa18.39■□□□□ 0.54
PRKCSH-209ENST00000589838 TPD52L3Q96J77 140 aa18.39■□□□□ 0.54
PRKCSH-209ENST00000589838 EPYCQ99645 322 aa18.39■□□□□ 0.54
PRKCSH-209ENST00000589838 APOL4Q9BPW4 351 aa18.39■□□□□ 0.54
PRKCSH-209ENST00000589838 DOHHQ9BU89 302 aa18.39■□□□□ 0.54
PRKCSH-209ENST00000589838 OR51B5Q9H339 312 aa18.39■□□□□ 0.54
PRKCSH-209ENST00000589838 PRSS16Q9NQE7 514 aa18.39■□□□□ 0.54
PRKCSH-209ENST00000589838 KIF17Q9P2E2 1029 aa18.39■□□□□ 0.54
PRKCSH-209ENST00000589838 THAP10Q9P2Z0 257 aaPredicted RBP18.39■□□□□ 0.54
PRKCSH-209ENST00000589838 EXO1Q9UQ84 846 aaKnown RBP18.39■□□□□ 0.54
PRKCSH-209ENST00000589838 KLHL33A6NCF5 533 aa18.39■□□□□ 0.53
PRKCSH-209ENST00000589838 SLC1A7O00341 560 aa18.39■□□□□ 0.53
PRKCSH-209ENST00000589838 C9P02748 559 aa18.39■□□□□ 0.53
PRKCSH-209ENST00000589838 NTRK1P04629 796 aa18.39■□□□□ 0.53
PRKCSH-209ENST00000589838 EPHX1P07099 455 aa18.39■□□□□ 0.53
PRKCSH-209ENST00000589838 CRATP43155 626 aa18.39■□□□□ 0.53
PRKCSH-209ENST00000589838 DAPP51397 102 aa18.39■□□□□ 0.53
PRKCSH-209ENST00000589838 IL5RAQ01344 420 aa18.39■□□□□ 0.53
PRKCSH-209ENST00000589838 CNTN1Q12860 1018 aa18.39■□□□□ 0.53
PRKCSH-209ENST00000589838 FADDQ13158 208 aa18.39■□□□□ 0.53
PRKCSH-209ENST00000589838 GAB1Q13480 694 aa18.39■□□□□ 0.53
PRKCSH-209ENST00000589838 ZNF385BQ569K4 471 aa18.39■□□□□ 0.53
PRKCSH-209ENST00000589838 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.39■□□□□ 0.531e-6■■■■■ 34
PRKCSH-209ENST00000589838 TRIM40Q6P9F5 258 aa18.39■□□□□ 0.53
PRKCSH-209ENST00000589838 ADGRD2Q7Z7M1 963 aa18.39■□□□□ 0.53
PRKCSH-209ENST00000589838 WDR48Q8TAF3 677 aa18.39■□□□□ 0.53
PRKCSH-209ENST00000589838 TFGQ92734 400 aaPredicted RBP18.39■□□□□ 0.53
PRKCSH-209ENST00000589838 SLC35A5Q9BS91 424 aa18.39■□□□□ 0.53
PRKCSH-209ENST00000589838 RIBC2Q9H4K1 309 aa18.39■□□□□ 0.53
PRKCSH-209ENST00000589838 PELI2Q9HAT8 420 aa18.39■□□□□ 0.53
PRKCSH-209ENST00000589838 WBP11Q9Y2W2 641 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms