RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 SNRNP40Q96DI7 357 aaKnown RBP16.73■□□□□ 0.27
TPM4-206ENST00000587201 CNDP1Q96KN2 507 aa16.73■□□□□ 0.27
TPM4-206ENST00000587201 LRRC1Q9BTT6 524 aa16.73■□□□□ 0.27
TPM4-206ENST00000587201 SLC29A3Q9BZD2 475 aa16.73■□□□□ 0.27
TPM4-206ENST00000587201 VN1R1Q9GZP7 353 aa16.73■□□□□ 0.27
TPM4-206ENST00000587201 ZNF700Q9H0M5 742 aa16.73■□□□□ 0.27
TPM4-206ENST00000587201 CSAG2Q9Y5P2 127 aa16.73■□□□□ 0.27
TPM4-206ENST00000587201 FLNBO75369 2602 aaKnown RBP16.72■□□□□ 0.27
TPM4-206ENST00000587201 ZNF860A6NHJ4 632 aa16.72■□□□□ 0.27
TPM4-206ENST00000587201 FAM155BO75949 473 aa16.72■□□□□ 0.27
TPM4-206ENST00000587201 C1QAP02745 245 aa16.72■□□□□ 0.27
TPM4-206ENST00000587201 SERPINA7P05543 415 aa16.72■□□□□ 0.27
TPM4-206ENST00000587201 CD1DP15813 335 aa16.72■□□□□ 0.27
TPM4-206ENST00000587201 ALOX12P18054 663 aa16.72■□□□□ 0.27
TPM4-206ENST00000587201 AHRP35869 848 aa16.72■□□□□ 0.27
TPM4-206ENST00000587201 GDF5P43026 501 aa16.72■□□□□ 0.27
TPM4-206ENST00000587201 RAB10P61026 200 aa16.72■□□□□ 0.27
TPM4-206ENST00000587201 ATP6V0D1P61421 351 aa16.72■□□□□ 0.27
TPM4-206ENST00000587201 PCOLCEQ15113 449 aa16.72■□□□□ 0.27
TPM4-206ENST00000587201 CRB2Q5IJ48 1285 aa16.72■□□□□ 0.27
TPM4-206ENST00000587201 ABHD13Q7L211 337 aa16.72■□□□□ 0.27
TPM4-206ENST00000587201 CUZD1Q86UP6 607 aa16.72■□□□□ 0.27
TPM4-206ENST00000587201 GPSM1Q86YR5 675 aa16.72■□□□□ 0.27
TPM4-206ENST00000587201 AFAP1L2Q8N4X5 818 aa16.72■□□□□ 0.27
TPM4-206ENST00000587201 FAM26EQ8N5C1 309 aa16.72■□□□□ 0.27
TPM4-206ENST00000587201 NT5CQ8TCD5 201 aa16.72■□□□□ 0.27
TPM4-206ENST00000587201 BRIX1Q8TDN6 353 aaKnown RBP16.72■□□□□ 0.27
TPM4-206ENST00000587201 ZNF592Q92610 1267 aa16.72■□□□□ 0.27
TPM4-206ENST00000587201 C19orf60Q96EN9 201 aa16.72■□□□□ 0.27
TPM4-206ENST00000587201 PEX11GQ96HA9 241 aa16.72■□□□□ 0.27
TPM4-206ENST00000587201 CYTH2Q99418 400 aa16.72■□□□□ 0.27
TPM4-206ENST00000587201 TUBB6Q9BUF5 446 aa16.72■□□□□ 0.27
TPM4-206ENST00000587201 WWOXQ9NZC7 414 aa16.72■□□□□ 0.27
TPM4-206ENST00000587201 PTGFRNQ9P2B2 879 aa16.72■□□□□ 0.27
TPM4-206ENST00000587201 C19orf25Q9UFG5 118 aaPredicted RBP16.72■□□□□ 0.27
TPM4-206ENST00000587201 DOCK10Q96BY6 2186 aa16.72■□□□□ 0.27
TPM4-206ENST00000587201 SCN3AQ9NY46 2000 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 OR2W5A6NFC9 320 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 URADA6NGE7 173 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 H2AFYO75367 372 aaKnown RBP16.71■□□□□ 0.27
TPM4-206ENST00000587201 WFS1O76024 890 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 CELA2AP08217 269 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 CYC1P08574 325 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 ZNF888P0CJ79 500 aaPredicted RBP16.71■□□□□ 0.27
TPM4-206ENST00000587201 ICAM2P13598 275 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 GNAZP19086 355 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 HNF4AP41235 474 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 SLC6A12P48065 614 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 SKP1P63208 163 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 MFAP5Q13361 173 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 SLMAPQ14BN4 828 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 ZKSCAN8Q15776 578 aaPredicted RBP16.71■□□□□ 0.27
TPM4-206ENST00000587201 WHAMMP3Q1A5X7 153 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 DEFB134Q4QY38 66 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 NIPAL1Q6NVV3 410 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 RIPOR1Q6ZS17 1223 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 LANCL3Q6ZV70 420 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 RAPH1Q70E73 1250 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 TCAIMQ8N3R3 496 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 SIRT6Q8N6T7 355 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 ANKRD53Q8N9V6 530 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 TRPV3Q8NET8 790 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 OR5T3Q8NGG3 340 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 LMF1Q96S06 567 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 RBCK1Q9BYM8 510 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 ASF1BQ9NVP2 202 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 PCDHGA10Q9Y5H3 936 aa16.71■□□□□ 0.27
TPM4-206ENST00000587201 COPG1Q9Y678 874 aaKnown RBP16.71■□□□□ 0.27
TPM4-206ENST00000587201 ASH1LQ9NR48 2969 aaKnown RBP16.71■□□□□ 0.26
TPM4-206ENST00000587201 IGHV3-20A0A0C4DH32 117 aa16.7■□□□□ 0.26
TPM4-206ENST00000587201 TCP11X1B4DZS4 312 aa16.7■□□□□ 0.26
TPM4-206ENST00000587201 GALR3O60755 368 aaPredicted RBP16.7■□□□□ 0.26
TPM4-206ENST00000587201 CDC123O75794 336 aaPredicted RBP16.7■□□□□ 0.26
TPM4-206ENST00000587201 B3GALT4O96024 378 aa16.7■□□□□ 0.26
TPM4-206ENST00000587201 C1GALT1C1LP0DN25 315 aa16.7■□□□□ 0.26
TPM4-206ENST00000587201 AP2B1P63010 937 aa16.7■□□□□ 0.26
TPM4-206ENST00000587201 GUCY2DQ02846 1103 aa16.7■□□□□ 0.26
TPM4-206ENST00000587201 CDC16Q13042 620 aa16.7■□□□□ 0.26
TPM4-206ENST00000587201 NAB1Q13506 487 aa16.7■□□□□ 0.26
TPM4-206ENST00000587201 CPEB2Q7Z5Q1 589 aaKnown RBP16.7■□□□□ 0.26
TPM4-206ENST00000587201 KLHDC8AQ8IYD2 350 aa16.7■□□□□ 0.26
TPM4-206ENST00000587201 UTP15Q8TED0 518 aaKnown RBP16.7■□□□□ 0.26
TPM4-206ENST00000587201 PSMF1Q92530 271 aa16.7■□□□□ 0.26
TPM4-206ENST00000587201 TMEM79Q9BSE2 394 aa16.7■□□□□ 0.26
TPM4-206ENST00000587201 CAPS2Q9BXY5 557 aa16.7■□□□□ 0.26
TPM4-206ENST00000587201 CNOT10Q9H9A5 744 aaKnown RBP16.7■□□□□ 0.26
TPM4-206ENST00000587201 CD274Q9NZQ7 290 aa16.7■□□□□ 0.26
TPM4-206ENST00000587201 CTAGE15A4D2H0 777 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 CLEC18AA5D8T8 446 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 TAPBPO15533 448 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 SEC24DO94855 1032 aaPredicted RBP16.69■□□□□ 0.26
TPM4-206ENST00000587201 S100BP04271 92 aaPredicted RBP16.69■□□□□ 0.26
TPM4-206ENST00000587201 ITGAMP11215 1152 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 IL10P22301 178 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 SOX11P35716 441 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 AGTR2P50052 363 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 RAB8AP61006 207 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 OLR1P78380 273 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 ARG2P78540 354 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 SRSF1Q07955 248 aaKnown RBP eCLIP16.69■□□□□ 0.262e-6■□□□□ 8.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms