RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 E9PAM4 449 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 CLDN4O14493 209 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 ULK1O75385 1050 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 ERN1O75460 977 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 CXCL14O95715 111 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 THRBP10828 461 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 HNRNPLP14866 589 aaKnown RBP eCLIP11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 RPS2P15880 293 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 FPR3P25089 353 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 RFC2P35250 354 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 NDUFV1P49821 464 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 RAB25P57735 213 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 CD47Q08722 323 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 OR2B11Q5JQS5 317 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 C9orf152Q5JTZ5 239 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 SPOUT1Q5T280 376 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 TTC23Q5W5X9 447 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 FAM92BQ6ZTR7 304 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 UNC5BQ8IZJ1 945 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 SLC43A2Q8N370 569 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 LRRC52Q8N7C0 313 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 NLGN4YQ8NFZ3 816 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 PCDH19Q8TAB3 1148 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 AGR3Q8TD06 166 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 NR4A3Q92570 626 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 NXPE2Q96DL1 559 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 VWCEQ96DN2 955 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 PGLYRP2Q96PD5 576 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 ACOX2Q99424 681 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 TREX2Q9BQ50 279 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 MED10Q9BTT4 135 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 PDCD10Q9BUL8 212 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 MAGEB5Q9BZ81 275 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 SARDHQ9UL12 918 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 PDE4DIPQ5VU43 2346 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 BCLAF3A2AJT9 711 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 TUBAL3A6NHL2 446 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 TARM1B6A8C7 271 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 ATG12O94817 140 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 LAP3P28838 519 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 TIE1P35590 1138 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 PPP3CCP48454 512 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 TSPAN5P62079 268 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 CBLBQ13191 982 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 SV2CQ496J9 727 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 NOMO2Q5JPE7 1267 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 SDHAF4Q5VUM1 108 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 ARHGAP11AQ6P4F7 1023 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 ZNF534Q76KX8 674 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 DPPA2Q7Z7J5 298 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 SPPL2CQ8IUH8 684 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 ABI1Q8IZP0 508 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 NARS2Q96I59 477 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 CPEB1Q9BZB8 566 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 ALG2Q9H553 416 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 KCMF1Q9P0J7 381 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 SLC17A6Q9P2U8 582 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 MBD1Q9UIS9 605 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 PCDHB7Q9Y5E2 793 aa11.49□□□□□ -0.57
CDK5RAP3-232ENST00000584168 SYNJ2BP-COX16A0A087WUM0 186 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 A0A1W2PQ09 198 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 POM121CA8CG34 1229 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 A8MXK9 166 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 MYL12BO14950 172 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 AIREO43918 545 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 CSF2P04141 144 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 MYL12AP19105 171 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 CA5AP35218 305 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 TGFBR2P37173 567 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 POU4F1Q01851 419 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 PRPSAP1Q14558 356 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 LAIR2Q6ISS4 152 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 RBMS3Q6XE24 437 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 GK5Q6ZS86 529 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 TAS1R1Q7RTX1 841 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 LUZP2Q86TE4 346 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 CLHC1Q8NHS4 586 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 WDR36Q8NI36 951 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 CEP76Q8TAP6 659 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 GPR152Q8TDT2 470 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 ELP5Q8TE02 316 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 DPH7Q9BTV6 452 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 ANKRD19PQ9H560 264 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 COX16Q9P0S2 106 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 MYEF2Q9P2K5 600 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 MGAT4AQ9UM21 535 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 PCDHGB7Q9Y5F8 929 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 F5H423 210 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 SLC28A1O00337 649 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 SELENOFO60613 162 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 CYP7B1O75881 506 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 LY86O95711 162 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 GUCA1CO95843 209 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 LDLRP01130 860 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 ITGAMP11215 1152 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 ZNF8P17098 575 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 MAGEA6P43360 314 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 RAB4BP61018 213 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 RRAS2P62070 204 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 DEFB103AP81534 67 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms