RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 EXT2Q93063 718 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 NXPE2Q96DL1 559 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 CFAP57Q96MR6 1250 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 FAM129AQ9BZQ8 928 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 FN3KQ9H479 309 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 ANAPC11Q9NYG5 84 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 PILRBQ9UKJ0 227 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 POMT2Q9UKY4 750 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 COLEC10Q9Y6Z7 277 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 IL16Q14005 1332 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 NPHP3Q7Z494 1330 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 IGHV3-20A0A0C4DH32 117 aa2.56□□□□□ -2
SMCHD1-206ENST00000581631 A8MVM7 634 aa2.56□□□□□ -2
SMCHD1-206ENST00000581631 UBE2CO00762 179 aa2.56□□□□□ -2
SMCHD1-206ENST00000581631 MAGEB2O15479 319 aa2.56□□□□□ -2
SMCHD1-206ENST00000581631 RPLP0P05388 317 aaKnown RBP2.56□□□□□ -2
SMCHD1-206ENST00000581631 FYNP06241 537 aa2.56□□□□□ -2
SMCHD1-206ENST00000581631 CD59P13987 128 aa2.56□□□□□ -2
SMCHD1-206ENST00000581631 EPORP19235 508 aa2.56□□□□□ -2
SMCHD1-206ENST00000581631 ATP4BP51164 291 aa2.56□□□□□ -2
SMCHD1-206ENST00000581631 NDST2P52849 883 aa2.56□□□□□ -2
SMCHD1-206ENST00000581631 FKBP3Q00688 224 aaKnown RBP2.56□□□□□ -2
SMCHD1-206ENST00000581631 CAMK2DQ13557 499 aa2.56□□□□□ -2
SMCHD1-206ENST00000581631 RASA2Q15283 850 aa2.56□□□□□ -2
SMCHD1-206ENST00000581631 FAM106AQ4KMX7 169 aa2.56□□□□□ -2
SMCHD1-206ENST00000581631 TTC27Q6P3X3 843 aa2.56□□□□□ -2
SMCHD1-206ENST00000581631 PPP1R21Q6ZMI0 780 aa2.56□□□□□ -2
SMCHD1-206ENST00000581631 ANKRD33Q7Z3H0 272 aa2.56□□□□□ -2
SMCHD1-206ENST00000581631 AMIGO1Q86WK6 493 aa2.56□□□□□ -2
SMCHD1-206ENST00000581631 FAM219AQ8IW50 185 aa2.56□□□□□ -2
SMCHD1-206ENST00000581631 OR4N5Q8IXE1 308 aa2.56□□□□□ -2
SMCHD1-206ENST00000581631 SLC22A15Q8IZD6 547 aa2.56□□□□□ -2
SMCHD1-206ENST00000581631 RMDN1Q96DB5 314 aa2.56□□□□□ -2
SMCHD1-206ENST00000581631 RBM41Q96IZ5 413 aaKnown RBP2.56□□□□□ -2
SMCHD1-206ENST00000581631 ATF6BQ99941 703 aa2.56□□□□□ -2
SMCHD1-206ENST00000581631 KATNB1Q9BVA0 655 aa2.56□□□□□ -2
SMCHD1-206ENST00000581631 GTSE1Q9NYZ3 720 aa2.56□□□□□ -2
SMCHD1-206ENST00000581631 C5AR2Q9P296 337 aa2.56□□□□□ -2
SMCHD1-206ENST00000581631 FBXL4Q9UKA2 621 aa2.56□□□□□ -2
SMCHD1-206ENST00000581631 PLCL2Q9UPR0 1127 aa2.56□□□□□ -2
SMCHD1-206ENST00000581631 A0A1W2PPW3 197 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 F8VVB4 439 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 F8VWA3 439 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 H3BMM5 538 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 PHF1O43189 567 aaPredicted RBP2.55□□□□□ -2
SMCHD1-206ENST00000581631 GALR3O60755 368 aaPredicted RBP2.55□□□□□ -2
SMCHD1-206ENST00000581631 YES1P07947 543 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 MELTFP08582 738 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 PCP11498 1178 aaKnown RBP2.55□□□□□ -2
SMCHD1-206ENST00000581631 TCF4P15884 667 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 ERCC2P18074 760 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 ZBTB25P24278 435 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 NEDD4P46934 1319 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 ZFP36L2P47974 494 aaKnown RBP2.55□□□□□ -2
SMCHD1-206ENST00000581631 CLDN17P56750 224 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 KIAA0141Q14154 515 aaPredicted RBP2.55□□□□□ -2
SMCHD1-206ENST00000581631 EIPR1Q53HC9 387 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 LBHQ53QV2 105 aaPredicted RBP2.55□□□□□ -2
SMCHD1-206ENST00000581631 KRBOX4Q5JUW0 171 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 SLC30A6Q6NXT4 461 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 MOXD1Q6UVY6 613 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 PRSS55Q6UWB4 352 aaPredicted RBP2.55□□□□□ -2
SMCHD1-206ENST00000581631 PP632Q6XCG6 107 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 C5orf24Q7Z6I8 188 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 RNF130Q86XS8 419 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 SPPL2AQ8TCT8 520 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.55□□□□□ -2
SMCHD1-206ENST00000581631 VPS33AQ96AX1 596 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 UBAC1Q9BSL1 405 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 NAA11Q9BSU3 229 aaPredicted RBP2.55□□□□□ -2
SMCHD1-206ENST00000581631 TXLNGYQ9BZA5 131 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 ADNPQ9H2P0 1102 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 ST6GALNAC4Q9H4F1 302 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 POLKQ9UBT6 870 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 HEG1Q9ULI3 1381 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 LIPGQ9Y5X9 500 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 KIF25-AS1Q9Y6Z4 181 aa2.55□□□□□ -2
SMCHD1-206ENST00000581631 hCG_38984A0A1B0GV85 526 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 TRAFD1O14545 582 aaPredicted RBP2.54□□□□□ -2
SMCHD1-206ENST00000581631 PRAF2O60831 178 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 LUC7L3O95232 432 aaKnown RBP2.54□□□□□ -2
SMCHD1-206ENST00000581631 HPP00738 406 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 PENKP01210 267 aaPredicted RBP2.54□□□□□ -2
SMCHD1-206ENST00000581631 DNTTP04053 509 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 LDHCP07864 332 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 GP9P14770 177 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 C4BPBP20851 252 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 EDNRAP25101 427 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 PIK3R1P27986 724 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 GPR183P32249 361 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 RGS7P49802 495 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 NDUFV3P56181 108 aaKnown RBP2.54□□□□□ -2
SMCHD1-206ENST00000581631 ERVK-16P61578 105 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 BTG1P62324 171 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 POU5F1Q01860 360 aaKnown RBP2.54□□□□□ -2
SMCHD1-206ENST00000581631 SULT2A1Q06520 285 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 COG2Q14746 738 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 KHDRBS2Q5VWX1 349 aaKnown RBP2.54□□□□□ -2
SMCHD1-206ENST00000581631 FUT10Q6P4F1 479 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 CEACAM19Q7Z692 300 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms