RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 NIPAL1Q6NVV3 410 aa11.91□□□□□ -0.5
TSEN54-204ENST00000577197 NOXRED1Q6NXP6 359 aa11.91□□□□□ -0.5
TSEN54-204ENST00000577197 FIGLAQ6QHK4 219 aa11.91□□□□□ -0.5
TSEN54-204ENST00000577197 SCIMPQ6UWF3 145 aa11.91□□□□□ -0.5
TSEN54-204ENST00000577197 KMT5CQ86Y97 462 aa11.91□□□□□ -0.5
TSEN54-204ENST00000577197 GATAD2AQ86YP4 633 aa11.91□□□□□ -0.5
TSEN54-204ENST00000577197 FUNDC1Q8IVP5 155 aa11.91□□□□□ -0.5
TSEN54-204ENST00000577197 DPP10Q8N608 796 aa11.91□□□□□ -0.5
TSEN54-204ENST00000577197 ZNF655Q8N720 491 aaPredicted RBP11.91□□□□□ -0.5
TSEN54-204ENST00000577197 ANKRD53Q8N9V6 530 aa11.91□□□□□ -0.5
TSEN54-204ENST00000577197 PCYOX1LQ8NBM8 494 aa11.91□□□□□ -0.5
TSEN54-204ENST00000577197 OR2I1PQ8NGU4 316 aa11.91□□□□□ -0.5
TSEN54-204ENST00000577197 OR10G6Q8NH81 332 aa11.91□□□□□ -0.5
TSEN54-204ENST00000577197 NT5CQ8TCD5 201 aa11.91□□□□□ -0.5
TSEN54-204ENST00000577197 CREB3L4Q8TEY5 395 aa11.91□□□□□ -0.5
TSEN54-204ENST00000577197 TM4SF19Q96DZ7 209 aa11.91□□□□□ -0.5
TSEN54-204ENST00000577197 ZDHHC12Q96GR4 267 aa11.91□□□□□ -0.5
TSEN54-204ENST00000577197 TMEM74Q96NL1 305 aa11.91□□□□□ -0.5
TSEN54-204ENST00000577197 RAB3IPQ96QF0 476 aaPredicted RBP11.91□□□□□ -0.5
TSEN54-204ENST00000577197 MRPL1Q9BYD6 325 aaKnown RBP11.91□□□□□ -0.5
TSEN54-204ENST00000577197 ACTL8Q9H568 366 aa11.91□□□□□ -0.5
TSEN54-204ENST00000577197 CLMPQ9H6B4 373 aa11.91□□□□□ -0.5
TSEN54-204ENST00000577197 PRDM9Q9NQV7 894 aa11.91□□□□□ -0.5
TSEN54-204ENST00000577197 PILRAQ9UKJ1 303 aa11.91□□□□□ -0.5
TSEN54-204ENST00000577197 ARID1BQ8NFD5 2236 aaPredicted RBP11.91□□□□□ -0.5
TSEN54-204ENST00000577197 SNRNP200O75643 2136 aaKnown RBP11.9□□□□□ -0.5
TSEN54-204ENST00000577197 MN1Q10571 1320 aaPredicted RBP11.9□□□□□ -0.5
TSEN54-204ENST00000577197 GSAPA4D1B5 854 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 TLCD2A6NGC4 264 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 RHPN2P1A8MT19 583 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 CFLARO15519 480 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 OR1F1O43749 312 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 DUX1O43812 170 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 NRP2O60462 931 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 EEDO75530 441 aaKnown RBP11.9□□□□□ -0.5
TSEN54-204ENST00000577197 C9P02748 559 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 G6PDP11413 515 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 SDC1P18827 310 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 POLR2CP19387 275 aaPredicted RBP11.9□□□□□ -0.5
TSEN54-204ENST00000577197 BCL6P41182 706 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 GRK6P43250 576 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 POLR2JP52435 117 aaKnown RBP11.9□□□□□ -0.5
TSEN54-204ENST00000577197 LIMK1P53667 647 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 MAZP56270 477 aaKnown RBP11.9□□□□□ -0.5
TSEN54-204ENST00000577197 CORO7P57737 925 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 SRSF11Q05519 484 aaKnown RBP11.9□□□□□ -0.5
TSEN54-204ENST00000577197 ZNF763Q0D2J5 394 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 RBBP5Q15291 538 aaKnown RBP11.9□□□□□ -0.5
TSEN54-204ENST00000577197 TCEA2Q15560 299 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 SPRED3Q2MJR0 410 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 ZC3H12BQ5HYM0 836 aaKnown RBP11.9□□□□□ -0.5
TSEN54-204ENST00000577197 WDR74Q6RFH5 385 aaPredicted RBP11.9□□□□□ -0.5
TSEN54-204ENST00000577197 C16orf89Q6UX73 402 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 R3HCC1LQ7Z5L2 792 aaKnown RBP11.9□□□□□ -0.5
TSEN54-204ENST00000577197 SNX32Q86XE0 403 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 RIMKLAQ8IXN7 391 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 SLC35F3Q8IY50 421 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 C2orf73Q8N5S3 287 aaPredicted RBP11.9□□□□□ -0.5
TSEN54-204ENST00000577197 KYQ8NBH2 561 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 CAMKVQ8NCB2 501 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 ZNF740Q8NDX6 193 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.9□□□□□ -0.5
TSEN54-204ENST00000577197 RGMAQ96B86 450 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 TCTN2Q96GX1 697 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 APIPQ96GX9 242 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 APOLD1Q96LR9 279 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 OR2A5Q96R48 311 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 HBEGFQ99075 208 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 ZFYVE21Q9BQ24 234 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 TBCDQ9BTW9 1192 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 DPY30Q9C005 99 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 SLC6A16Q9GZN6 736 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 CAAP1Q9H8G2 361 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 DDX31Q9H8H2 851 aaKnown RBP11.9□□□□□ -0.5
TSEN54-204ENST00000577197 MYNNQ9NPC7 610 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 SLC52A3Q9NQ40 469 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 TAS2R1Q9NYW7 299 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 CCDC167Q9P0B6 97 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 RAPGEFL1Q9UHV5 662 aa11.9□□□□□ -0.5
TSEN54-204ENST00000577197 PRPF19Q9UMS4 504 aaKnown RBP11.9□□□□□ -0.5
TSEN54-204ENST00000577197 POLR3HQ9Y535 204 aaPredicted RBP11.9□□□□□ -0.5
TSEN54-204ENST00000577197 COL5A1P20908 1838 aaPredicted RBP11.89□□□□□ -0.51
TSEN54-204ENST00000577197 TRBV23OR9-2A0A075B6M9 112 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 A0A088AWK7 358 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 C15orf38-AP3S2A0A0A6YYH1 394 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 LRIT2A6NDA9 550 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 B2RBV5 119 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 HAT1O14929 419 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 ANGPT2O15123 496 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 CAPN5O15484 640 aaPredicted RBP11.89□□□□□ -0.51
TSEN54-204ENST00000577197 GYG2O15488 501 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 NDUFS4O43181 175 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 GFRA3O60609 400 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 SRPX2O60687 465 aaPredicted RBP11.89□□□□□ -0.51
TSEN54-204ENST00000577197 GUCY1B2O75343 617 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 ETHE1O95571 254 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 TBX6O95947 436 aaPredicted RBP11.89□□□□□ -0.51
TSEN54-204ENST00000577197 SLC35G6P0C7Q6 338 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 MAGP20916 626 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 ZNF10P21506 573 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms