RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 ZNF557Q8N988 423 aaPredicted RBP8.61□□□□□ -1.03
NCBP3-204ENST00000574911 OR4A15Q8NGL6 344 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.61□□□□□ -1.032e-35■■■■■ 40.3
NCBP3-204ENST00000574911 S100ZQ8WXG8 99 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 TCEAL4Q96EI5 215 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 SAMD11Q96NU1 681 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 LINC00597Q9H2U6 94 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 SPHK2Q9NRA0 654 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 FBXO8Q9NRD0 319 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 CHCHD3Q9NX63 227 aaKnown RBP8.61□□□□□ -1.03
NCBP3-204ENST00000574911 PMF1-BGLAPU3KQ54 211 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 MGAT4DA6NG13 374 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 BOLA2-SMG1P6H3BVE0 249 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 M0R3G1 203 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 PCDH7O60245 1069 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 TNFRSF21O75509 655 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 C1orf105O95561 183 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 POLR2EP19388 210 aaKnown RBP8.6□□□□□ -1.03
NCBP3-204ENST00000574911 PSMB9P28065 219 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 PDHA2P29803 388 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 RRM2P31350 389 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 TGFBR2P37173 567 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 VBP1P61758 197 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 SELENOWP63302 87 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 RELAQ04206 551 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 TMEM115Q12893 351 aaPredicted RBP8.6□□□□□ -1.03
NCBP3-204ENST00000574911 ARHGEF6Q15052 776 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 UBE2UQ5VVX9 321 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 MED27Q6P2C8 311 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 TMEM220Q6QAJ8 160 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 NLRP8Q86W28 1048 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 MFSD4AQ8N468 514 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 FBXO15Q8NCQ5 510 aaPredicted RBP8.6□□□□□ -1.03
NCBP3-204ENST00000574911 C11orf65Q8NCR3 313 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 GPR156Q8NFN8 814 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 OR4C15Q8NGM1 316 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 OR6Q1Q8NGQ2 317 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 PHF10Q8WUB8 498 aaKnown RBP8.6□□□□□ -1.03
NCBP3-204ENST00000574911 CYB5D2Q8WUJ1 264 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 ZNF296Q8WUU4 475 aaPredicted RBP8.6□□□□□ -1.03
NCBP3-204ENST00000574911 DNASE1L2Q92874 299 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 NEIL2Q969S2 332 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 WDR34Q96EX3 536 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 ALPK1Q96QP1 1244 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 REEP4Q9H6H4 257 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 RASSF1Q9NS23 344 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 GPATCH2Q9NW75 528 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 NDUFAF4Q9P032 175 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 DKK3Q9UBP4 350 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 IL36AQ9UHA7 158 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 RNF6Q9Y252 685 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 SH3GLB1Q9Y371 365 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 LYVE1Q9Y5Y7 322 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 KPNA4O00629 521 aaPredicted RBP8.6□□□□□ -1.03
NCBP3-204ENST00000574911 TOR1BO14657 336 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 NADKO95544 446 aaPredicted RBP8.6□□□□□ -1.03
NCBP3-204ENST00000574911 CXCL14O95715 111 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 DDX6P26196 483 aaKnown RBP eCLIP8.6□□□□□ -1.03
NCBP3-204ENST00000574911 AQP1P29972 269 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 GRK3P35626 688 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 WDR5P61964 334 aaKnown RBP8.6□□□□□ -1.03
NCBP3-204ENST00000574911 LSM3P62310 102 aaKnown RBP8.6□□□□□ -1.03
NCBP3-204ENST00000574911 OXA1LQ15070 435 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 TEAD2Q15562 447 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 ZNF805Q5CZA5 627 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 MLIPQ5VWP3 458 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 ZNF852Q6ZMS4 543 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 RBM12BQ8IXT5 1001 aaKnown RBP8.6□□□□□ -1.03
NCBP3-204ENST00000574911 HCAR2Q8TDS4 363 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 SORCS1Q8WY21 1168 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 REPS1Q96D71 796 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 FOPNLQ96NB1 174 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 MROQ9BYG7 248 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 PLCXD1Q9NUJ7 323 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 TMEM184CQ9NVA4 438 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 SH3BP4Q9P0V3 963 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 KCNE2Q9Y6J6 123 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 CLDN24A6NM45 220 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 TNFRSF11BO00300 401 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 FOXE1O00358 373 aaPredicted RBP8.6□□□□□ -1.03
NCBP3-204ENST00000574911 KLHL18O94889 574 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 NTRK1P04629 796 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 ALDH4A1P30038 563 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 GGT2P36268 569 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 MMP12P39900 470 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 SERPINB10P48595 397 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 MNX1P50219 401 aaPredicted RBP8.6□□□□□ -1.03
NCBP3-204ENST00000574911 EPHA5P54756 1037 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 NCS1P62166 190 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 PDE7AQ13946 482 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 ELOAQ14241 798 aaKnown RBP8.6□□□□□ -1.03
NCBP3-204ENST00000574911 COX20Q5RI15 118 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 LY6G5CQ5SRR4 150 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 LIPIQ6XZB0 460 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 CCDC80Q76M96 950 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 OTOP2Q7RTS6 562 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 TMPRSS11BQ86T26 416 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 LAS2Q8IYD9 372 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 NRSN1Q8IZ57 195 aa8.6□□□□□ -1.03
NCBP3-204ENST00000574911 OR52N2Q8NGI0 321 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms