RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	RNF44	Q7L0R7	432 aa		13.72	□□□□□ -0.21
ABR-223	ENST00000573895	LRRC56	Q8IYG6	542 aa	Predicted RBP	13.72	□□□□□ -0.21
ABR-223	ENST00000573895	KIRREL3	Q8IZU9	778 aa		13.72	□□□□□ -0.21
ABR-223	ENST00000573895	CCNYL1	Q8N7R7	359 aa		13.72	□□□□□ -0.21
ABR-223	ENST00000573895	PPP4R1	Q8TF05	950 aa		13.72	□□□□□ -0.21
ABR-223	ENST00000573895	IP6K3	Q96PC2	410 aa		13.72	□□□□□ -0.21
ABR-223	ENST00000573895	DRC3	Q9H069	523 aa		13.72	□□□□□ -0.21
ABR-223	ENST00000573895	EML4	Q9HC35	981 aa	Known RBP	13.72	□□□□□ -0.21
ABR-223	ENST00000573895	MRPS30	Q9NP92	439 aa	Known RBP	13.72	□□□□□ -0.21
ABR-223	ENST00000573895	IRAK4	Q9NWZ3	460 aa		13.72	□□□□□ -0.21
ABR-223	ENST00000573895	WWOX	Q9NZC7	414 aa		13.72	□□□□□ -0.21
ABR-223	ENST00000573895	STOX2	Q9P2F5	926 aa	Predicted RBP	13.72	□□□□□ -0.21
ABR-223	ENST00000573895	MAN2B2	Q9Y2E5	1009 aa		13.72	□□□□□ -0.21
ABR-223	ENST00000573895	STK38L	Q9Y2H1	464 aa		13.72	□□□□□ -0.21
ABR-223	ENST00000573895	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	13.72	□□□□□ -0.21
ABR-223	ENST00000573895	MYO18B	Q8IUG5	2567 aa		13.72	□□□□□ -0.21
ABR-223	ENST00000573895	TENM4	Q6N022	2769 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895		A0A1B0GX78	115 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895		K7EPI3	171 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	SNN	O75324	88 aa	Predicted RBP	13.71	□□□□□ -0.21
ABR-223	ENST00000573895	SUPT7L	O94864	414 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	MLYCD	O95822	493 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	ALB	P02768	609 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	PIM1	P11309	404 aa	Predicted RBP	13.71	□□□□□ -0.21
ABR-223	ENST00000573895	HRH2	P25021	359 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	IMPA1	P29218	277 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	SLC1A6	P48664	564 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	EMP3	P54852	163 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	ABCE1	P61221	599 aa	Known RBP	13.71	□□□□□ -0.21
ABR-223	ENST00000573895	GNGT1	P63211	74 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	BST1	Q10588	318 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	NFATC3	Q12968	1075 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	IL10RA	Q13651	578 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	RCN2	Q14257	317 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	ICE2	Q659A1	982 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	ZNF425	Q6IV72	752 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	MRPL14	Q6P1L8	145 aa	Known RBP	13.71	□□□□□ -0.21
ABR-223	ENST00000573895	FBXO42	Q6P3S6	717 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	SUSD1	Q6UWL2	747 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	LRRC70	Q7Z2Q7	622 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	TTC29	Q8NA56	475 aa	Predicted RBP	13.71	□□□□□ -0.21
ABR-223	ENST00000573895	OR56A3	Q8NH54	315 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	C9orf43	Q8TAL5	461 aa	Predicted RBP	13.71	□□□□□ -0.21
ABR-223	ENST00000573895	FKBP10	Q96AY3	582 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	NACC2	Q96BF6	587 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	ABHD17A	Q96GS6	310 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	TMEM237	Q96Q45	408 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	ZFYVE21	Q9BQ24	234 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	PLCD4	Q9BRC7	762 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	DPH7	Q9BTV6	452 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	PCBD2	Q9H0N5	130 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	IFT80	Q9P2H3	777 aa	Predicted RBP	13.71	□□□□□ -0.21
ABR-223	ENST00000573895	OPTC	Q9UBM4	332 aa		13.71	□□□□□ -0.21
ABR-223	ENST00000573895	DHCR7	Q9UBM7	475 aa	Known RBP	13.71	□□□□□ -0.21
ABR-223	ENST00000573895	GPN3	Q9UHW5	284 aa	Predicted RBP	13.71	□□□□□ -0.21
ABR-223	ENST00000573895	IGKV1-8	A0A0C4DH67	115 aa		13.7	□□□□□ -0.22
ABR-223	ENST00000573895	GMNC	A6NCL1	334 aa		13.7	□□□□□ -0.22
ABR-223	ENST00000573895	TCP11X1	B4DZS4	312 aa		13.7	□□□□□ -0.22
ABR-223	ENST00000573895	MKRN2OS	H3BPM6	223 aa		13.7	□□□□□ -0.22
ABR-223	ENST00000573895	DSCR3	O14972	297 aa		13.7	□□□□□ -0.22
ABR-223	ENST00000573895	RPS17	P08708	135 aa	Known RBP	13.7	□□□□□ -0.22
ABR-223	ENST00000573895	LSP1	P33241	339 aa		13.7	□□□□□ -0.22
ABR-223	ENST00000573895	SLC6A12	P48065	614 aa		13.7	□□□□□ -0.22
ABR-223	ENST00000573895	HSPA7	P48741	367 aa		13.7	□□□□□ -0.22
ABR-223	ENST00000573895	AGTR2	P50052	363 aa		13.7	□□□□□ -0.22
ABR-223	ENST00000573895	CLC	Q05315	142 aa		13.7	□□□□□ -0.22
ABR-223	ENST00000573895	SSPN	Q14714	243 aa		13.7	□□□□□ -0.22
ABR-223	ENST00000573895	WASHC2D	Q5SRD0	308 aa		13.7	□□□□□ -0.22
ABR-223	ENST00000573895	TTC19	Q6DKK2	380 aa	Predicted RBP	13.7	□□□□□ -0.22
ABR-223	ENST00000573895	CAPN13	Q6MZZ7	669 aa	Predicted RBP	13.7	□□□□□ -0.22
ABR-223	ENST00000573895	TCTN3	Q6NUS6	607 aa		13.7	□□□□□ -0.22
ABR-223	ENST00000573895	TTLL10	Q6ZVT0	673 aa		13.7	□□□□□ -0.22
ABR-223	ENST00000573895	PAQR7	Q86WK9	346 aa		13.7	□□□□□ -0.22
ABR-223	ENST00000573895	OR2Y1	Q8NGV0	311 aa		13.7	□□□□□ -0.22
ABR-223	ENST00000573895	ZNF483	Q8TF39	744 aa	Predicted RBP	13.7	□□□□□ -0.22
ABR-223	ENST00000573895	C7orf26	Q96N11	449 aa		13.7	□□□□□ -0.22
ABR-223	ENST00000573895	ACAT2	Q9BWD1	397 aa		13.7	□□□□□ -0.22
ABR-223	ENST00000573895	ILKAP	Q9H0C8	392 aa	Predicted RBP	13.7	□□□□□ -0.22
ABR-223	ENST00000573895	SLC26A1	Q9H2B4	701 aa		13.7	□□□□□ -0.22
ABR-223	ENST00000573895	WDR54	Q9H977	334 aa		13.7	□□□□□ -0.22
ABR-223	ENST00000573895	SLC6A20	Q9NP91	592 aa		13.7	□□□□□ -0.22
ABR-223	ENST00000573895	CUTC	Q9NTM9	273 aa		13.7	□□□□□ -0.22
ABR-223	ENST00000573895	NDOR1	Q9UHB4	597 aa		13.7	□□□□□ -0.22
ABR-223	ENST00000573895	TAC3	Q9UHF0	121 aa		13.7	□□□□□ -0.22
ABR-223	ENST00000573895	PCTP	Q9UKL6	214 aa		13.7	□□□□□ -0.22
ABR-223	ENST00000573895	ANGPTL3	Q9Y5C1	460 aa		13.7	□□□□□ -0.22
ABR-223	ENST00000573895	NUP210L	Q5VU65	1888 aa		13.7	□□□□□ -0.22
ABR-223	ENST00000573895		A0A0J9YVX5	310 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	E2F3	O00716	465 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	SUV39H1	O43463	412 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	CCNT2	O60583	730 aa	Known RBP	13.69	□□□□□ -0.22
ABR-223	ENST00000573895	SHOX2	O60902	331 aa	Predicted RBP	13.69	□□□□□ -0.22
ABR-223	ENST00000573895	SIX3	O95343	332 aa	Predicted RBP	13.69	□□□□□ -0.22
ABR-223	ENST00000573895	HSPA4L	O95757	839 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	IGHE	P01854	428 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	VIM	P08670	466 aa	Known RBP	13.69	□□□□□ -0.22
ABR-223	ENST00000573895	PLA2G2A	P14555	144 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	EZR	P15311	586 aa	Known RBP	13.69	□□□□□ -0.22
ABR-223	ENST00000573895	EPB42	P16452	691 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	ALAS2	P22557	587 aa		13.69	□□□□□ -0.22

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