RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 POPDC3Q9HBV1 291 aa12.01□□□□□ -0.49
NPLOC4-213ENST00000573519 LRRC4CQ9HCJ2 640 aa12.01□□□□□ -0.49
NPLOC4-213ENST00000573519 C19orf25Q9UFG5 118 aaPredicted RBP12.01□□□□□ -0.49
NPLOC4-213ENST00000573519 OARD1Q9Y530 152 aa12.01□□□□□ -0.49
NPLOC4-213ENST00000573519 PCDHGA10Q9Y5H3 936 aa12.01□□□□□ -0.49
NPLOC4-213ENST00000573519 PCM1Q15154 2024 aa12.01□□□□□ -0.49
NPLOC4-213ENST00000573519 RELNP78509 3460 aa12.01□□□□□ -0.49
NPLOC4-213ENST00000573519 LOC102723996A0A087X1L8 192 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 DYTNA2CJ06 578 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 CLEC18AA5D8T8 446 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 FAM159BA6NKW6 160 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 PHGDHO43175 533 aaKnown RBP12□□□□□ -0.49
NPLOC4-213ENST00000573519 FAM155BO75949 473 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 WDR47O94967 919 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 F10P00742 488 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 ZNF888P0CJ79 500 aaPredicted RBP12□□□□□ -0.49
NPLOC4-213ENST00000573519 CCDC166P0CW27 439 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 HNF4AP41235 474 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 HNMTP50135 292 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 OLR1P78380 273 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 ILF2Q12905 390 aaKnown RBP12□□□□□ -0.49
NPLOC4-213ENST00000573519 PWP1Q13610 501 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 ELOAQ14241 798 aaKnown RBP12□□□□□ -0.49
NPLOC4-213ENST00000573519 EFTUD2Q15029 972 aaKnown RBP eCLIP12□□□□□ -0.49
NPLOC4-213ENST00000573519 HERC3Q15034 1050 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 TLR1Q15399 786 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 C18orf21Q32NC0 220 aaPredicted RBP12□□□□□ -0.49
NPLOC4-213ENST00000573519 DEFB134Q4QY38 66 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 CLEC18BQ6UXF7 455 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 AMER2Q8N7J2 671 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 PPM1NQ8N819 430 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 CLEC18CQ8NCF0 446 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 CATSPER1Q8NEC5 780 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 MNS1Q8NEH6 495 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 OR5T3Q8NGG3 340 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 FBF1Q8TES7 1133 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 ANKRD7Q92527 254 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 LMF1Q96S06 567 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 CYTH2Q99418 400 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 RBBP8Q99708 897 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 CPNE1Q99829 537 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 AIF1LQ9BQI0 150 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 MCMBPQ9BTE3 642 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 TUBB6Q9BUF5 446 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 PELI2Q9HAT8 420 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 AGPAT4Q9NRZ5 378 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 ZDHHC18Q9NUE0 388 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 PLA2G3Q9NZ20 509 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 DMGDHQ9UI17 866 aaKnown RBP12□□□□□ -0.49
NPLOC4-213ENST00000573519 ZFP69BQ9UJL9 534 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 SLC22A7Q9Y694 548 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 KCNE2Q9Y6J6 123 aa12□□□□□ -0.49
NPLOC4-213ENST00000573519 CTAGE15A4D2H0 777 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 SEMA7AO75326 666 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 B3GALT4O96024 378 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 C1QAP02745 245 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 GSTA2P09210 222 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 CTAGE8P0CG41 777 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 ITGAMP11215 1152 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 ICAM2P13598 275 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 STMN1P16949 149 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 ALOX12P18054 663 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 GP5P40197 560 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 GDF5P43026 501 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 SCTRP47872 440 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 RAB8AP61006 207 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 AP2B1P63010 937 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 SKP1P63208 163 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 CDKL1Q00532 357 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 REEP5Q00765 189 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 BTBD16Q32M84 506 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 KBTBD12Q3ZCT8 623 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 UBAP2Q5T6F2 1119 aaKnown RBP11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 B3GNTL1Q67FW5 361 aaPredicted RBP11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 NXPE4Q6UWF7 544 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 RIPOR1Q6ZS17 1223 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 ABHD13Q7L211 337 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 CPEB2Q7Z5Q1 589 aaKnown RBP11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 ANKRD37Q7Z713 158 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 CTAGE6Q86UF2 777 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 CTAGE4Q8IX94 777 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 OR1N1Q8NGS0 311 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 KIF18AQ8NI77 898 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 NT5CQ8TCD5 201 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 IFT81Q8WYA0 676 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 SARGQ9BW04 601 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 DERL2Q9GZP9 239 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 WWOXQ9NZC7 414 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 NTNG1Q9Y2I2 539 aa11.99□□□□□ -0.49
NPLOC4-213ENST00000573519 A0A1W2PQ72 361 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 ANKUB1A6NFN9 424 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 A8MUI8 341 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 KIF2AO00139 706 aaPredicted RBP11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 GALR3O60755 368 aaPredicted RBP11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 H2AFYO75367 372 aaKnown RBP11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 CBX6O95503 412 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 TUBB4AP04350 444 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 GNAZP19086 355 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 SPRP35270 261 aaPredicted RBP11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 SOX11P35716 441 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms