RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, human

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNAPC5-208	ENST00000568875	PPP6C	O00743	305 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	PLD2	O14939	933 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	KCNJ13	O60928	360 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	PGM3	O95394	542 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	TSPAN12	O95859	305 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	HOXB3	P14651	431 aa	Predicted RBP	11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	SLC2A4	P14672	509 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	FAS	P25445	335 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	PSMA4	P25789	261 aa	Known RBP	11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	GRIA3	P42263	894 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	FOXA1	P55317	472 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	KCNK10	P57789	538 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	ERVK-8	P63133	956 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	UBE2I	P63279	158 aa	Known RBP	11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	GPLD1	P80108	840 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	HHEX	Q03014	270 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	NFATC2	Q13469	925 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	GTF2H3	Q13889	308 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	TSN	Q15631	228 aa	Known RBP	11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	PLA2G4E	Q3MJ16	856 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	VPS26B	Q4G0F5	336 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	NADK2	Q4G0N4	442 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	HMBOX1	Q6NT76	420 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	TMEM220	Q6QAJ8	160 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	WASH2P	Q6VEQ5	465 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	CERS6	Q6ZMG9	384 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	SLC9B2	Q86UD5	537 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	ZNF761	Q86XN6	746 aa	Predicted RBP	11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	GPSM1	Q86YR5	675 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	TRAPPC5	Q8IUR0	188 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	TRPV3	Q8NET8	790 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	TFAP2C	Q92754	450 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	EXT2	Q93063	718 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	CENPN	Q96H22	339 aa	Predicted RBP	11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	NSUN5	Q96P11	429 aa	Known RBP	11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	SLC38A3	Q99624	504 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	PRPF18	Q99633	342 aa	Known RBP	11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	HGH1	Q9BTY7	390 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	C9orf16	Q9BUW7	83 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	OSGEPL1	Q9H4B0	414 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	NOL11	Q9H8H0	719 aa	Known RBP	11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	WASH6P	Q9NQA3	447 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	AGPAT4	Q9NRZ5	378 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	NUDT4	Q9NZJ9	180 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	ZNF624	Q9P2J8	865 aa	Predicted RBP	11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	CPNE7	Q9UBL6	633 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	LEF1	Q9UJU2	399 aa	Predicted RBP	11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	MYRF	Q9Y2G1	1151 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	RNF11	Q9Y3C5	154 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	ADAMTS20	P59510	1910 aa		11.17	□□□□□ -0.62
SNAPC5-208	ENST00000568875	IGHV5-10-1	A0A0J9YXX1	117 aa		11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	FAM234B	A2RU67	622 aa		11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	TRIM64C	A6NLI5	447 aa		11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875		H3BNH8	94 aa		11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	POP7	O75817	140 aa	Known RBP	11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	TNFSF15	O95150	251 aa		11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	LINC00032	P0C843	101 aa		11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	ATP6V1B2	P21281	511 aa		11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	RBMS1	P29558	406 aa	Known RBP	11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	SLC19A1	P41440	591 aa		11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	MLLT3	P42568	568 aa	Predicted RBP	11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	DMPK	Q09013	629 aa		11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	PCBP2	Q15366	365 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	SMU1	Q2TAY7	513 aa		11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	KCTD21	Q4G0X4	260 aa		11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	MTX3	Q5HYI7	312 aa		11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	TBCEL	Q5QJ74	424 aa		11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	C19orf48	Q6RUI8	117 aa		11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	CYP2R1	Q6VVX0	501 aa		11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	RNF165	Q6ZSG1	346 aa		11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	GPRIN3	Q6ZVF9	776 aa		11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	AMZ2	Q86W34	360 aa		11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	DPP10	Q8N608	796 aa		11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	TSPAN14	Q8NG11	270 aa		11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	OR4D9	Q8NGE8	314 aa		11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	TMEM125	Q96AQ2	219 aa		11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	TMEM159	Q96B96	161 aa		11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	SH3KBP1	Q96B97	665 aa		11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	PPWD1	Q96BP3	646 aa	Known RBP	11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	ZNF514	Q96K75	400 aa	Predicted RBP	11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	DCBLD2	Q96PD2	775 aa		11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	ZCCHC2	Q9C0B9	1178 aa	Known RBP	11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	THSD1	Q9NS62	852 aa		11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	CMTM6	Q9NX76	183 aa		11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	ZNF106	Q9H2Y7	1883 aa	Known RBP	11.16	□□□□□ -0.62
SNAPC5-208	ENST00000568875	IGSF10	Q6WRI0	2623 aa		11.15	□□□□□ -0.62
SNAPC5-208	ENST00000568875	TRIM64	A6NGJ6	449 aa		11.15	□□□□□ -0.62
SNAPC5-208	ENST00000568875	LRRC14B	A6NHZ5	514 aa		11.15	□□□□□ -0.62
SNAPC5-208	ENST00000568875	ZNF839	A8K0R7	811 aa		11.15	□□□□□ -0.62
SNAPC5-208	ENST00000568875	BTN3A1	O00481	513 aa		11.15	□□□□□ -0.62
SNAPC5-208	ENST00000568875	RRP8	O43159	456 aa	Known RBP	11.15	□□□□□ -0.62
SNAPC5-208	ENST00000568875	SGTA	O43765	313 aa		11.15	□□□□□ -0.62
SNAPC5-208	ENST00000568875	SLC22A3	O75751	556 aa		11.15	□□□□□ -0.62
SNAPC5-208	ENST00000568875	MSH3	P20585	1137 aa		11.15	□□□□□ -0.62
SNAPC5-208	ENST00000568875	IDS	P22304	550 aa		11.15	□□□□□ -0.62
SNAPC5-208	ENST00000568875	RPL10	P27635	214 aa	Known RBP	11.15	□□□□□ -0.62
SNAPC5-208	ENST00000568875	ITPKB	P27987	946 aa		11.15	□□□□□ -0.62
SNAPC5-208	ENST00000568875	HTR1E	P28566	365 aa		11.15	□□□□□ -0.62
SNAPC5-208	ENST00000568875	MC4R	P32245	332 aa		11.15	□□□□□ -0.62
SNAPC5-208	ENST00000568875	CSF2RB	P32927	897 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms