RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 C3orf18Q9UK00 162 aa7.75□□□□□ -1.17
HDGFL3-205ENST00000568129 FBXL4Q9UKA2 621 aa7.75□□□□□ -1.17
HDGFL3-205ENST00000568129 ZNF490Q9ULM2 529 aaPredicted RBP7.75□□□□□ -1.17
HDGFL3-205ENST00000568129 TSC22D4Q9Y3Q8 395 aa7.75□□□□□ -1.17
HDGFL3-205ENST00000568129 IGHV1-45A0A0A0MS14 117 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 PABPN1LA6NDY0 278 aaKnown RBP7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 SLC28A2O43868 658 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 GALR3O60755 368 aaPredicted RBP7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 DPM1O60762 260 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 KERAO60938 352 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 CLEC3AO75596 197 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 STK16O75716 305 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 SLC35G6P0C7Q6 338 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 COX6A1P12074 109 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 COL6A2P12110 1019 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 ALOX12P18054 663 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 TFEBP19484 476 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 NR1D1P20393 614 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 CNTFP26441 200 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 GCAP28676 217 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 GMPRP36959 345 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 SERPINB9P50453 376 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 EMP2P54851 167 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 MEF2AQ02078 507 aaPredicted RBP7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 TUBB8Q3ZCM7 444 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 MROH9Q5TGP6 573 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 H3F3CQ6NXT2 135 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 ADGRD1Q6QNK2 874 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 TIFABQ6ZNK6 161 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 TRMT10CQ7L0Y3 403 aaKnown RBP7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 NDUFAF7Q7L592 441 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 PRSS41Q7RTY9 318 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 LRRC70Q7Z2Q7 622 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 VN1R5Q7Z5H4 357 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 TBC1D1Q86TI0 1168 aaPredicted RBP7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 PTRH1Q86Y79 214 aaKnown RBP7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 IFT20Q8IY31 132 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 SHISA5Q8N114 240 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 TMEM151AQ8N4L1 468 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 TBC1D19Q8N5T2 526 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 METTL27Q8N6F8 245 aaPredicted RBP7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 CLEC1AQ8NC01 280 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 OR9A4Q8NGU2 314 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 DCAKDQ8WVC6 231 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 IFT81Q8WYA0 676 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 PSMF1Q92530 271 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 NXNL1Q96CM4 212 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 TRIM44Q96DX7 344 aaPredicted RBP7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 BARD1Q99728 777 aaKnown RBP7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 EGFL8Q99944 293 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 MACROD1Q9BQ69 325 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 CRB3Q9BUF7 120 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 CD244Q9BZW8 370 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 VN1R1Q9GZP7 353 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 ZNF700Q9H0M5 742 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 EPN3Q9H201 632 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 EPB41L4BQ9H329 900 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 ANKHQ9HCJ1 492 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 LANCL2Q9NS86 450 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 ABCF3Q9NUQ8 709 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 DNAJC11Q9NVH1 559 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 NUDT4Q9NZJ9 180 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 TRPC4Q9UBN4 977 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 DYRK1BQ9Y463 629 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 HEMK1Q9Y5R4 338 aaPredicted RBP7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 CROCCQ5TZA2 2017 aa7.74□□□□□ -1.17
HDGFL3-205ENST00000568129 POLEQ07864 2286 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 A0A087WUV0 522 aaPredicted RBP7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 A0A096LPK6 155 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 CLEC18AA5D8T8 446 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 LRIT2A6NDA9 550 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 URADA6NGE7 173 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 SYCE1LA8MT33 242 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 SGK494L7N484 410 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 CDK2AP1O14519 115 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 NDUFS4O43181 175 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 ALOX12BO75342 701 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 H2AFYO75367 372 aaKnown RBP7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 KLHL18O94889 574 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 WDR47O94967 919 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 CD22P20273 847 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 VARSP26640 1264 aaKnown RBP7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 TNFRSF8P28908 595 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 HSPA7P48741 367 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 SERPINB8P50452 374 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 FOXK1P85037 733 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 RHAGQ02094 409 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 TLE1Q04724 770 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 RGS1Q08116 209 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 LAPTM5Q13571 262 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 NAA30Q147X3 362 aaPredicted RBP7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 SETDB1Q15047 1291 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 PCOLCEQ15113 449 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 PCBP2Q15366 365 aaKnown RBP eCLIP7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 RBBP7Q16576 425 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 SYT16Q17RD7 645 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 FAM83EQ2M2I3 478 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 JMJD6Q6NYC1 403 aaPredicted RBP7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 CLEC18BQ6UXF7 455 aa7.73□□□□□ -1.17
HDGFL3-205ENST00000568129 TMIGD1Q6UXZ0 262 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms