RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 FFAR3O14843 346 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 GPR42O15529 346 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 FOXS1O43638 330 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 SERPINA6P08185 405 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 BGNP21810 368 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 HNRNPH1P31943 449 aaKnown RBP17.12■□□□□ 0.33
COMMD4-222ENST00000568034 ARL1P40616 181 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-222ENST00000568034 ARSFP54793 590 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 FOXA1P55317 472 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 PPP2R2AP63151 447 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 MAP7Q14244 749 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 RCN2Q14257 317 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 CHI3L2Q15782 390 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 ADPRMQ3LIE5 342 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 TCHHL1Q5QJ38 904 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-222ENST00000568034 MANEAQ5SRI9 462 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 HHATQ5VTY9 493 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 UNQ6494/PRO21346Q6UXR6 183 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 ZNF517Q6ZMY9 492 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-222ENST00000568034 DSELQ8IZU8 1212 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 AFAP1L2Q8N4X5 818 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 CDYL2Q8N8U2 506 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 HUS1BQ8NHY5 278 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 SNIP1Q8TAD8 396 aaKnown RBP17.12■□□□□ 0.33
COMMD4-222ENST00000568034 CNDP1Q96KN2 507 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 MAGEB10Q96LZ2 347 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-222ENST00000568034 KCNA7Q96RP8 456 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 NDC1Q9BTX1 674 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 TRMOQ9BU70 441 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 MS4A8Q9BY19 250 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 DRC3Q9H069 523 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 KLHL31Q9H511 634 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 CCDC86Q9H6F5 360 aaKnown RBP17.12■□□□□ 0.33
COMMD4-222ENST00000568034 MID1IP1Q9NPA3 183 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 DMRT3Q9NQL9 472 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 NKIRAS1Q9NYS0 192 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 PCDHGA11Q9Y5H2 935 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 DSCR3O14972 297 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 RAD1O60671 282 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 SERPINE1P05121 402 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 SERPIND1P05546 499 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 CAPN1P07384 714 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 HBQ1P09105 142 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 SMIM10L1P0DMW3 83 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 PCNAP12004 261 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 SERPINB1P30740 379 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 SERPINB5P36952 375 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 HTR6P50406 440 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 RGS1Q08116 209 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 GALNT1Q10472 559 aaPredicted RBP17.11■□□□□ 0.33
COMMD4-222ENST00000568034 MUM1Q2TAK8 710 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 FAM214AQ32MH5 1076 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 ARL13AQ5H913 290 aaPredicted RBP17.11■□□□□ 0.33
COMMD4-222ENST00000568034 C1orf189Q5VU69 101 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 FRG2Q64ET8 278 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 LCN10Q6JVE6 187 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 TTLL10Q6ZVT0 673 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 PRSS41Q7RTY9 318 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 CUZD1Q86UP6 607 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 ZCCHC10Q8TBK6 192 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 PROKR1Q8TCW9 393 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 FGF11Q92914 225 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 CLIP3Q96DZ5 547 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 SMIM10Q96HG1 83 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 FRG2BQ96QU4 278 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 PAIP2Q9BPZ3 127 aaKnown RBP17.11■□□□□ 0.33
COMMD4-222ENST00000568034 NLNQ9BYT8 704 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 SLC29A3Q9BZD2 475 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 SHCBP1LQ9BZQ2 653 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 SLC22A11Q9NSA0 550 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 FRYQ5TBA9 3013 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 CHD8Q9HCK8 2581 aa17.11■□□□□ 0.33
COMMD4-222ENST00000568034 ACACAQ13085 2346 aa17.1■□□□□ 0.33
COMMD4-222ENST00000568034 CELSR3Q9NYQ7 3312 aa17.1■□□□□ 0.33
COMMD4-222ENST00000568034 A0A1B0GX78 115 aa17.1■□□□□ 0.33
COMMD4-222ENST00000568034 LRIT2A6NDA9 550 aa17.1■□□□□ 0.33
COMMD4-222ENST00000568034 ANKDD1BA6NHY2 528 aa17.1■□□□□ 0.33
COMMD4-222ENST00000568034 MAGEB17A8MXT2 336 aa17.1■□□□□ 0.33
COMMD4-222ENST00000568034 MEN1O00255 615 aa17.1■□□□□ 0.33
COMMD4-222ENST00000568034 ITM2AO43736 263 aa17.1■□□□□ 0.33
COMMD4-222ENST00000568034 ETHE1O95571 254 aa17.1■□□□□ 0.33
COMMD4-222ENST00000568034 ENO1P06733 434 aaKnown RBP17.1■□□□□ 0.33
COMMD4-222ENST00000568034 LIPCP11150 499 aa17.1■□□□□ 0.33
COMMD4-222ENST00000568034 PIK3CBP42338 1070 aa17.1■□□□□ 0.33
COMMD4-222ENST00000568034 ATP1A2P50993 1020 aa17.1■□□□□ 0.33
COMMD4-222ENST00000568034 NEK2P51955 445 aa17.1■□□□□ 0.33
COMMD4-222ENST00000568034 FAM53BQ14153 422 aa17.1■□□□□ 0.33
COMMD4-222ENST00000568034 TGIF1Q15583 401 aa17.1■□□□□ 0.33
COMMD4-222ENST00000568034 TOR1AIP1Q5JTV8 583 aa17.1■□□□□ 0.33
COMMD4-222ENST00000568034 C6orf15Q6UXA7 325 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-222ENST00000568034 PDSS2Q86YH6 399 aa17.1■□□□□ 0.33
COMMD4-222ENST00000568034 NLGN4XQ8N0W4 816 aa17.1■□□□□ 0.33
COMMD4-222ENST00000568034 METTL27Q8N6F8 245 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-222ENST00000568034 NLGN4YQ8NFZ3 816 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-222ENST00000568034 UTP15Q8TED0 518 aaKnown RBP17.1■□□□□ 0.33
COMMD4-222ENST00000568034 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-222ENST00000568034 REPS1Q96D71 796 aa17.1■□□□□ 0.33
COMMD4-222ENST00000568034 MS4A6EQ96DS6 147 aa17.1■□□□□ 0.33
COMMD4-222ENST00000568034 MTERF1Q99551 399 aaKnown RBP17.1■□□□□ 0.33
COMMD4-222ENST00000568034 C20orf27Q9GZN8 174 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms