RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 SLC22A7Q9Y694 548 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.53□□□□□ -1.68
CLK3-219ENST00000567805 DOPEY2Q9Y3R5 2298 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 NBASA2RRP1 2371 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 TCRBV9S1A1TA0A576 114 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 DYTNA2CJ06 578 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 NPEPPSL1A6NEC2 478 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 URADA6NGE7 173 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 CXorf49A8MYA2 514 aaPredicted RBP4.52□□□□□ -1.69
CLK3-219ENST00000567805 SGK494L7N484 410 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 CDC7O00311 574 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 RDH16O75452 317 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 KLHL18O94889 574 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 AGFG2O95081 481 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 WISP3O95389 354 aaPredicted RBP4.52□□□□□ -1.69
CLK3-219ENST00000567805 CBX6O95503 412 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 STATHP02808 62 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 SERPINA7P05543 415 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 UQCRHP07919 91 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 GSTA2P09210 222 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 IL1RNP18510 177 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 GNAZP19086 355 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 GSTM2P28161 218 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 SSTR1P30872 391 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 SOX11P35716 441 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 AHRP35869 848 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 TSFMP43897 325 aaKnown RBP4.52□□□□□ -1.69
CLK3-219ENST00000567805 XCR1P46094 333 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 SCTRP47872 440 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 AGTR2P50052 363 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 EFNA3P52797 238 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 SLC12A2P55011 1212 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 TAS2R39P59534 338 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 SNRPNP63162 240 aaKnown RBP4.52□□□□□ -1.69
CLK3-219ENST00000567805 ARG2P78540 354 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 MRPS25P82663 173 aaKnown RBP4.52□□□□□ -1.69
CLK3-219ENST00000567805 MAT1AQ00266 395 aaKnown RBP4.52□□□□□ -1.69
CLK3-219ENST00000567805 REEP5Q00765 189 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 MEF2AQ02078 507 aaPredicted RBP4.52□□□□□ -1.69
CLK3-219ENST00000567805 C2orf54Q08AI8 447 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 CDC16Q13042 620 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 MRPL49Q13405 166 aaKnown RBP4.52□□□□□ -1.69
CLK3-219ENST00000567805 ZNF460Q14592 562 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 PCOLCEQ15113 449 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 TLR1Q15399 786 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 TGFBIQ15582 683 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 TSNQ15631 228 aaKnown RBP4.52□□□□□ -1.69
CLK3-219ENST00000567805 INAQ16352 499 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 MINDY4Q4G0A6 757 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 CDKL4Q5MAI5 379 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 CATSPEREQ5SY80 951 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 MFSD4BQ5TF39 518 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 PLAG1Q6DJT9 500 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 NIPAL1Q6NVV3 410 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 RPUSD3Q6P087 351 aaKnown RBP4.52□□□□□ -1.69
CLK3-219ENST00000567805 NXPE4Q6UWF7 544 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 SYT10Q6XYQ8 523 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 LINC00696Q6ZRV3 163 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 CAPN12Q6ZSI9 719 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 C3orf62Q6ZUJ4 267 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 FRA10AC1Q70Z53 315 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 ABHD13Q7L211 337 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 ZNF572Q7Z3I7 529 aaPredicted RBP4.52□□□□□ -1.69
CLK3-219ENST00000567805 CPEB2Q7Z5Q1 589 aaKnown RBP4.52□□□□□ -1.69
CLK3-219ENST00000567805 TMPRSS11BQ86T26 416 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 THOC6Q86W42 341 aaKnown RBP4.52□□□□□ -1.69
CLK3-219ENST00000567805 PDSS2Q86YH6 399 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 CEP97Q8IW35 865 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 KLHDC8AQ8IYD2 350 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 TCAIMQ8N3R3 496 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 AFAP1L2Q8N4X5 818 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 CISD2Q8N5K1 135 aaKnown RBP4.52□□□□□ -1.69
CLK3-219ENST00000567805 KCT2Q8NC54 265 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 ZNF740Q8NDX6 193 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 TRPV3Q8NET8 790 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 TTLQ8NG68 377 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 ZCCHC10Q8TBK6 192 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 DNAJB14Q8TBM8 379 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 NT5CQ8TCD5 201 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 BRIX1Q8TDN6 353 aaKnown RBP4.52□□□□□ -1.69
CLK3-219ENST00000567805 ANKRD49Q8WVL7 239 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 SLC5A11Q8WWX8 675 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 PSMF1Q92530 271 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 HAS2Q92819 552 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 C19orf60Q96EN9 201 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 TSPAN17Q96FV3 270 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 CNDP1Q96KN2 507 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 IMMP1LQ96LU5 166 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 TSNARE1Q96NA8 513 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 PSMG3-AS1Q96PY0 264 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 OR1F2PQ96R84 312 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 CYTH2Q99418 400 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 GPR22Q99680 433 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 RBBP8Q99708 897 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 CPNE1Q99829 537 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 EGFL8Q99944 293 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 MACROD1Q9BQ69 325 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 AIF1LQ9BQI0 150 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 TUBB6Q9BUF5 446 aa4.52□□□□□ -1.69
CLK3-219ENST00000567805 DERL2Q9GZP9 239 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms