RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 DARS2Q6PI48 645 aaKnown RBP8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 RNF44Q7L0R7 432 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 ZNF227Q86WZ6 799 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 CSNK1A1LQ8N752 337 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 CFAP61Q8NHU2 1237 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 SLC35B2Q8TB61 432 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 RERGQ96A58 199 aaPredicted RBP8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 IL17FQ96PD4 163 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 QKIQ96PU8 341 aaKnown RBP eCLIP8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 FCRL5Q96RD9 977 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 RAB11FIP5Q9BXF6 653 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 ATG10Q9H0Y0 220 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 ALKBH4Q9NXW9 302 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 UTP6Q9NYH9 597 aaKnown RBP8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 SAE1Q9UBE0 346 aaPredicted RBP8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 ACAD8Q9UKU7 415 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 TRBV5-4A0A0C4DH59 114 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 GOLGA6L10A0A0M3HER8 536 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 H0YIG0 161 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 ACOT7O00154 380 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 DVL2O14641 736 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 PSMD3O43242 534 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 FOXS1O43638 330 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 OR56A5P0C7T3 313 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 PKMP14618 531 aaKnown RBP8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 GABRA1P14867 456 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 CMPK1P30085 196 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 MC4RP32245 332 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 CXCR5P32302 372 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 CDKN1CP49918 316 aaPredicted RBP8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 EFNA3P52797 238 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 MAT1AQ00266 395 aaKnown RBP8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 PLGLB1Q02325 96 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 RUNX1T1Q06455 604 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 NSDHLQ15738 373 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 CYP1B1Q16678 543 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 FBXL19-AS1Q494R0 122 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 SFT2D3Q587I9 215 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 C1orf185Q5T7R7 199 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 WLSQ5T9L3 541 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 ITPRIPL1Q6GPH6 555 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 RTL6Q6ICC9 239 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 KIAA0930Q6ICG6 404 aaPredicted RBP8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 AADACL2Q6P093 401 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 PAPD4Q6PIY7 484 aaKnown RBP8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 DCUN1D3Q8IWE4 304 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 OR2L3Q8NG85 312 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 OR13C4Q8NGS5 318 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 OR51Q1Q8NH59 317 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 LINC01560Q8TB33 94 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 ELP5Q8TE02 316 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 LRRC45Q96CN5 670 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 OXNAD1Q96HP4 312 aaPredicted RBP8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 RUNDC3BQ96NL0 473 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 SMC6Q96SB8 1091 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 TIMMDC1Q9NPL8 285 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 KLHL8Q9P2G9 620 aaPredicted RBP8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 ZNF148Q9UQR1 794 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 RUVBL1Q9Y265 456 aaKnown RBP8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 FAM215AQ9Y5M1 114 aa8.46□□□□□ -1.06
VPS9D1-205ENST00000565452 ZANQ9Y493 2812 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 OR2A25A4D2G3 310 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 CCDC188H7C350 402 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 CASKO14936 926 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 PHF1O43189 567 aaPredicted RBP8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 LIASO43766 372 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 ANXA9O76027 345 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 CNOT4O95628 575 aaKnown RBP8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 BMP5P22003 454 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 RBL1P28749 1068 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 MPP1Q00013 466 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 WASHC5Q12768 1159 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 GRB7Q14451 532 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 PRPSAP1Q14558 356 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 USP10Q14694 798 aaKnown RBP8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 OASLQ15646 514 aaKnown RBP8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 HKDC1Q2TB90 917 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 P3H1Q32P28 736 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 HEPHL1Q6MZM0 1159 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 RANBP10Q6VN20 620 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 SYT10Q6XYQ8 523 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 HIPK1Q86Z02 1210 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 CREG2Q8IUH2 290 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 SLC22A15Q8IZD6 547 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 PLPP5Q8NEB5 264 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 OR2A1Q8NGT9 310 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 KIF18AQ8NI77 898 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 GRK7Q8WTQ7 553 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 ASZ1Q8WWH4 475 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 SLCO2A1Q92959 643 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 RAD51AP1Q96B01 352 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 SARAFQ96BY9 339 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 SPATA13Q96N96 652 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 SH3GL2Q99962 352 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 DPH7Q9BTV6 452 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 CIDEBQ9UHD4 219 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 AAR2Q9Y312 384 aaKnown RBP8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 MRFAP1Q9Y605 127 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 SONP18583 2426 aaKnown RBP8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 ANK2Q01484 3957 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms