RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 SLC44A1Q8WWI5 657 aa18.81■□□□□ 0.6
CMTM3-207ENST00000564060 METTL21AQ8WXB1 218 aa18.81■□□□□ 0.6
CMTM3-207ENST00000564060 EXT2Q93063 718 aa18.81■□□□□ 0.6
CMTM3-207ENST00000564060 MACROD1Q9BQ69 325 aa18.81■□□□□ 0.6
CMTM3-207ENST00000564060 TMEM79Q9BSE2 394 aa18.81■□□□□ 0.6
CMTM3-207ENST00000564060 EPN3Q9H201 632 aa18.81■□□□□ 0.6
CMTM3-207ENST00000564060 SCN2AQ99250 2005 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 A0A087WUV0 522 aaPredicted RBP18.8■□□□□ 0.6
CMTM3-207ENST00000564060 NSG1A0A0A6YYJ2 146 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 A0A1W2PQ72 361 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 SUPT3HB4E1H0 165 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 FFAR3O14843 346 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 GPR42O15529 346 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 TAPBPO15533 448 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 SUPT3HO75486 399 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 KRT38O76015 456 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 KLHL18O94889 574 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 BMP10O95393 424 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 C2P06681 752 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 SERPINA6P08185 405 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 CNTFP26441 200 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 XCR1P46094 333 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 HSPA7P48741 367 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 AP2B1P63010 937 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 MAT1AQ00266 395 aaKnown RBP18.8■□□□□ 0.6
CMTM3-207ENST00000564060 BMPR2Q13873 1038 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 PDK4Q16654 411 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 SYT16Q17RD7 645 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 TMIGD1Q6UXZ0 262 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 SLCO4C1Q6ZQN7 724 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 LAPTM4BQ86VI4 370 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 TMEM151BQ8IW70 566 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 AFAP1L2Q8N4X5 818 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 SNX31Q8N9S9 440 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 OR1F2PQ96R84 312 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 PAFAH2Q99487 392 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 SPNS1Q9H2V7 528 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 NT5DC2Q9H857 520 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 CLK4Q9HAZ1 481 aaKnown RBP18.8■□□□□ 0.6
CMTM3-207ENST00000564060 IGSF5Q9NSI5 407 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 RIC8BQ9NVN3 520 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 C19orf25Q9UFG5 118 aaPredicted RBP18.8■□□□□ 0.6
CMTM3-207ENST00000564060 PTBP2Q9UKA9 531 aaKnown RBP18.8■□□□□ 0.6
CMTM3-207ENST00000564060 MKL2Q9ULH7 1088 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 NFU1Q9UMS0 254 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 NAALAD2Q9Y3Q0 740 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 BAHCC1Q9P281 2608 aa18.8■□□□□ 0.6
CMTM3-207ENST00000564060 A0A096LPK6 155 aa18.79■□□□□ 0.6
CMTM3-207ENST00000564060 SGK494L7N484 410 aa18.79■□□□□ 0.6
CMTM3-207ENST00000564060 RDH16O75452 317 aa18.79■□□□□ 0.6
CMTM3-207ENST00000564060 VARSP26640 1264 aaKnown RBP18.79■□□□□ 0.6
CMTM3-207ENST00000564060 STXBP1P61764 594 aaKnown RBP18.79■□□□□ 0.6
CMTM3-207ENST00000564060 LAPTM5Q13571 262 aa18.79■□□□□ 0.6
CMTM3-207ENST00000564060 RAPSNQ13702 412 aa18.79■□□□□ 0.6
CMTM3-207ENST00000564060 SLBPQ14493 270 aaKnown RBP eCLIP18.79■□□□□ 0.6
CMTM3-207ENST00000564060 ACAP2Q15057 778 aa18.79■□□□□ 0.6
CMTM3-207ENST00000564060 C18orf21Q32NC0 220 aaPredicted RBP18.79■□□□□ 0.6
CMTM3-207ENST00000564060 MINDY4Q4G0A6 757 aa18.79■□□□□ 0.6
CMTM3-207ENST00000564060 PAGE2BQ5JRK9 111 aa18.79■□□□□ 0.6
CMTM3-207ENST00000564060 MFSD4BQ5TF39 518 aa18.79■□□□□ 0.6
CMTM3-207ENST00000564060 NDUFAF7Q7L592 441 aa18.79■□□□□ 0.6
CMTM3-207ENST00000564060 PRSS41Q7RTY9 318 aa18.79■□□□□ 0.6
CMTM3-207ENST00000564060 CNPY4Q8N129 248 aa18.79■□□□□ 0.6
CMTM3-207ENST00000564060 ANKRD53Q8N9V6 530 aa18.79■□□□□ 0.6
CMTM3-207ENST00000564060 NXNL1Q96CM4 212 aa18.79■□□□□ 0.6
CMTM3-207ENST00000564060 ATOH8Q96SQ7 321 aa18.79■□□□□ 0.6
CMTM3-207ENST00000564060 EFCAB11Q9BUY7 163 aa18.79■□□□□ 0.6
CMTM3-207ENST00000564060 CD244Q9BZW8 370 aa18.79■□□□□ 0.6
CMTM3-207ENST00000564060 SLC6A16Q9GZN6 736 aa18.79■□□□□ 0.6
CMTM3-207ENST00000564060 LHPPQ9H008 270 aa18.79■□□□□ 0.6
CMTM3-207ENST00000564060 ZNF552Q9H707 407 aaPredicted RBP18.79■□□□□ 0.6
CMTM3-207ENST00000564060 HCN3Q9P1Z3 774 aa18.79■□□□□ 0.6
CMTM3-207ENST00000564060 COPG2Q9UBF2 871 aa18.79■□□□□ 0.6
CMTM3-207ENST00000564060 ZNF180Q9UJW8 692 aa18.79■□□□□ 0.6
CMTM3-207ENST00000564060 CCNT2O60583 730 aaKnown RBP18.78■□□□□ 0.6
CMTM3-207ENST00000564060 GALR3O60755 368 aaPredicted RBP18.78■□□□□ 0.6
CMTM3-207ENST00000564060 ALOX12BO75342 701 aa18.78■□□□□ 0.6
CMTM3-207ENST00000564060 KLHL2O95198 593 aa18.78■□□□□ 0.6
CMTM3-207ENST00000564060 C8orf89P0DMQ9 161 aa18.78■□□□□ 0.6
CMTM3-207ENST00000564060 MSH2P43246 934 aa18.78■□□□□ 0.6
CMTM3-207ENST00000564060 CSRP3P50461 194 aa18.78■□□□□ 0.6
CMTM3-207ENST00000564060 DLG1Q12959 904 aa18.78■□□□□ 0.6
CMTM3-207ENST00000564060 AGAP7PQ5VUJ5 663 aa18.78■□□□□ 0.6
CMTM3-207ENST00000564060 TRMT10CQ7L0Y3 403 aaKnown RBP18.78■□□□□ 0.6
CMTM3-207ENST00000564060 PDSS2Q86YH6 399 aa18.78■□□□□ 0.6
CMTM3-207ENST00000564060 CENPLQ8N0S6 344 aaPredicted RBP18.78■□□□□ 0.6
CMTM3-207ENST00000564060 UBTD2Q8WUN7 234 aa18.78■□□□□ 0.6
CMTM3-207ENST00000564060 KCTD4Q8WVF5 259 aa18.78■□□□□ 0.6
CMTM3-207ENST00000564060 MOCOSQ96EN8 888 aa18.78■□□□□ 0.6
CMTM3-207ENST00000564060 PTCD3Q96EY7 689 aaKnown RBP18.78■□□□□ 0.6
CMTM3-207ENST00000564060 AGAP4Q96P64 663 aa18.78■□□□□ 0.6
CMTM3-207ENST00000564060 TRIM4Q9C037 500 aa18.78■□□□□ 0.6
CMTM3-207ENST00000564060 LOC102723996A0A087X1L8 192 aa18.77■□□□□ 0.6
CMTM3-207ENST00000564060 A0A088AWK7 358 aa18.77■□□□□ 0.6
CMTM3-207ENST00000564060 HMX2A2RU54 273 aa18.77■□□□□ 0.6
CMTM3-207ENST00000564060 ANKDD1BA6NHY2 528 aa18.77■□□□□ 0.6
CMTM3-207ENST00000564060 WISP1O95388 367 aa18.77■□□□□ 0.6
CMTM3-207ENST00000564060 ALDOAP04075 364 aaKnown RBP18.77■□□□□ 0.6
CMTM3-207ENST00000564060 ABHD2P08910 425 aa18.77■□□□□ 0.6
CMTM3-207ENST00000564060 RHOXF2BP0C7M4 288 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms