RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 DESI1Q6ICB0 168 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 CNIH3Q8TBE1 160 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 EGLN2Q96KS0 407 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 KCNC2Q96PR1 638 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 DEPDC7Q96QD5 511 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 DCSTAMPQ9H295 470 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 C1QTNF3-AMACRE9PGA6 284 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 E2F3O00716 465 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 CCNDBP1O95273 360 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 CHRM5P08912 532 aaPredicted RBP10.1□□□□□ -0.79
RNF40-204ENST00000563683 TNNI3P19429 210 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 ANXA11P50995 505 aaKnown RBP10.1□□□□□ -0.79
RNF40-204ENST00000563683 RPS7P62081 194 aaKnown RBP10.1□□□□□ -0.79
RNF40-204ENST00000563683 MBTPS1Q14703 1052 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 COLEC12Q5KU26 742 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 CATSPEREQ5SY80 951 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 AGAP6Q5VW22 663 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 CNKSR3Q6P9H4 555 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 CCBE1Q6UXH8 406 aaPredicted RBP10.1□□□□□ -0.79
RNF40-204ENST00000563683 Q6ZSR9 355 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 KRT73Q86Y46 540 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 OR8J3Q8NGG0 315 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 OR2T11Q8NH01 316 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 AGAP4Q96P64 663 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 RIMKLBQ9ULI2 386 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 CAB39Q9Y376 341 aaPredicted RBP10.1□□□□□ -0.79
RNF40-204ENST00000563683 PCDHB14Q9Y5E9 798 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 PCDHGA10Q9Y5H3 936 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 F5P12259 2224 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 KRT87PA6NCN2 255 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 ASPDHA6ND91 283 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 KCNK2O95069 426 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 ADH1CP00326 375 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 KLK1P06870 262 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 ITGAMP11215 1152 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 CD36P16671 472 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 JUNDP17535 347 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 CXCR2P25025 360 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 UGT2B10P36537 528 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 OR1E2P47887 323 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 MAPK12P53778 367 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 GNG2P59768 71 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 RPS13P62277 151 aaKnown RBP10.1□□□□□ -0.79
RNF40-204ENST00000563683 MADCAM1Q13477 382 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 DUOXA1Q1HG43 343 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 GPAT3Q53EU6 434 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 GCNT6Q5T4J0 391 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 BRAT1Q6PJG6 821 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 PEX5LQ8IYB4 626 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 DEPDC4Q8N2C3 294 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 RNF175Q8N4F7 328 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 ZNF296Q8WUU4 475 aaPredicted RBP10.1□□□□□ -0.79
RNF40-204ENST00000563683 RHBDF1Q96CC6 855 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 CCDC115Q96NT0 180 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 EQTNQ9NQ60 294 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 CLN6Q9NWW5 311 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 ZNF451Q9Y4E5 1061 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 ZNF646O15015 1829 aaPredicted RBP10.1□□□□□ -0.79
RNF40-204ENST00000563683 EFCAB10A6NFE3 127 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 SCO2O43819 266 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 CYP7B1O75881 506 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 STATHP02808 62 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 PRNPP04156 253 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 PCCBP05166 539 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 CBSLP0DN79 551 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 CBSP35520 551 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 RPL3P39023 403 aaKnown RBP10.09□□□□□ -0.79
RNF40-204ENST00000563683 MAP2K4P45985 399 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 NCF4Q15080 339 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 PON2Q15165 354 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 PCBP2Q15366 365 aaKnown RBP eCLIP10.09□□□□□ -0.793e-9■■□□□ 14.4
RNF40-204ENST00000563683 SLC8B1Q6J4K2 584 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 ZNF783Q6ZMS7 281 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 GRASPQ7Z6J2 395 aaPredicted RBP10.09□□□□□ -0.79
RNF40-204ENST00000563683 KIAA1958Q8N8K9 716 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 GRPEL2Q8TAA5 225 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 FRS2Q8WU20 508 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 HSH2DQ96JZ2 352 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 QRFPRQ96P65 431 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 CHCHD6Q9BRQ6 235 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 INPP5KQ9BT40 448 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 COPS4Q9BT78 406 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 KLF16Q9BXK1 252 aaPredicted RBP10.09□□□□□ -0.79
RNF40-204ENST00000563683 DUSP21Q9H596 190 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 SEC14L3Q9UDX4 400 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 WBP11Q9Y2W2 641 aaKnown RBP10.09□□□□□ -0.79
RNF40-204ENST00000563683 ISM1B1AKI9 464 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 FAM25AB3EWG3 89 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 FAM25CB3EWG5 89 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 FAM25GB3EWG6 89 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 MYL12BO14950 172 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 ALX3O95076 343 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 CHRNEQ04844 493 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 TMEM115Q12893 351 aaPredicted RBP10.09□□□□□ -0.79
RNF40-204ENST00000563683 ZFP69Q49AA0 526 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 RFLNAQ6ZTI6 216 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 VTCN1Q7Z7D3 282 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 REM2Q8IYK8 340 aaPredicted RBP10.09□□□□□ -0.79
RNF40-204ENST00000563683 SLC34A3Q8N130 599 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 IPCEF1Q8WWN9 437 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms