RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 WBP1Q96G27 269 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 SMIM10Q96HG1 83 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 CATSPER2Q96P56 530 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 UBL7Q96S82 380 aaPredicted RBP8.11□□□□□ -1.11
UBR1-204ENST00000563239 C17orf62Q9BQA9 187 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 MRPL57Q9BQC6 102 aaKnown RBP8.11□□□□□ -1.11
UBR1-204ENST00000563239 AIF1LQ9BQI0 150 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 CCDC77Q9BR77 488 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 MESP1Q9BRJ9 268 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 CAPS2Q9BXY5 557 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 SEMA4CQ9C0C4 833 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 SLC6A16Q9GZN6 736 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 DRC3Q9H069 523 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 KLHL31Q9H511 634 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 NT5DC2Q9H857 520 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 WDR54Q9H977 334 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 CPSF2Q9P2I0 782 aaKnown RBP8.11□□□□□ -1.11
UBR1-204ENST00000563239 GPN3Q9UHW5 284 aaPredicted RBP8.11□□□□□ -1.11
UBR1-204ENST00000563239 EMCNQ9ULC0 261 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 PTRH2Q9Y3E5 179 aaKnown RBP8.11□□□□□ -1.11
UBR1-204ENST00000563239 KCNMB2Q9Y691 235 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 SLC22A7Q9Y694 548 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 SGK494L7N484 410 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 CLGNO14967 610 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 NDUFS4O43181 175 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 NSA2O95478 260 aaKnown RBP8.1□□□□□ -1.11
UBR1-204ENST00000563239 ZGLP1P0C6A0 271 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 FAM87AP0C7U9 286 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 PIM1P11309 404 aaPredicted RBP8.1□□□□□ -1.11
UBR1-204ENST00000563239 GFAPP14136 432 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 IL1RNP18510 177 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 FBLP22087 321 aaKnown RBP8.1□□□□□ -1.11
UBR1-204ENST00000563239 MAT1AQ00266 395 aaKnown RBP8.1□□□□□ -1.11
UBR1-204ENST00000563239 CHIT1Q13231 466 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 LY6DQ14210 128 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 SSPNQ14714 243 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 RBBP5Q15291 538 aaKnown RBP8.1□□□□□ -1.11
UBR1-204ENST00000563239 VWA2Q5GFL6 755 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 XKR6Q5GH73 641 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 CPZQ66K79 652 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 BORAQ6PGQ7 559 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 TMIGD1Q6UXZ0 262 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 SHISA6Q6ZSJ9 500 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 GOLGA7Q7Z5G4 137 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 ZC3H7AQ8IWR0 971 aaKnown RBP8.1□□□□□ -1.11
UBR1-204ENST00000563239 TEX9Q8N6V9 391 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 PTGR2Q8N8N7 351 aaPredicted RBP8.1□□□□□ -1.11
UBR1-204ENST00000563239 ZCCHC10Q8TBK6 192 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 STT3BQ8TCJ2 826 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 UTP15Q8TED0 518 aaKnown RBP8.1□□□□□ -1.11
UBR1-204ENST00000563239 PHF21BQ96EK2 531 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 PTCD3Q96EY7 689 aaKnown RBP8.1□□□□□ -1.11
UBR1-204ENST00000563239 MMABQ96EY8 250 aaPredicted RBP8.1□□□□□ -1.11
UBR1-204ENST00000563239 SCYL1Q96KG9 808 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 TRIM55Q9BYV6 548 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 TGIF2Q9GZN2 237 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 PITHD1Q9GZP4 211 aaPredicted RBP8.1□□□□□ -1.11
UBR1-204ENST00000563239 MRPL46Q9H2W6 279 aaKnown RBP8.1□□□□□ -1.11
UBR1-204ENST00000563239 RHBGQ9H310 441 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 SOX17Q9H6I2 414 aaPredicted RBP8.1□□□□□ -1.11
UBR1-204ENST00000563239 PPCSQ9HAB8 311 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 ZBTB26Q9HCK0 441 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 OPTCQ9UBM4 332 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 CDC14AQ9UNH5 594 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 POLHQ9Y253 713 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 PADI2Q9Y2J8 665 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 CCDC88CQ9P219 2028 aa8.1□□□□□ -1.11
UBR1-204ENST00000563239 TLN1Q9Y490 2541 aaKnown RBP8.09□□□□□ -1.11
UBR1-204ENST00000563239 A0A1B0GTL3 188 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 LRIT2A6NDA9 550 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 ZNF860A6NHJ4 632 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 SMIM23A6NLE4 172 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 A8MT66 165 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 H0YIG0 161 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 STX16-NPEPL1H3BU86 382 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 MASP2O00187 686 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 PPP6CO00743 305 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 SOCS6O14544 535 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 OR7A17O14581 309 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 STX16O14662 325 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 DLX3O60479 287 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 GALR3O60755 368 aaPredicted RBP8.09□□□□□ -1.11
UBR1-204ENST00000563239 CDH16O75309 829 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 H2AFYO75367 372 aaKnown RBP8.09□□□□□ -1.11
UBR1-204ENST00000563239 JRKO75564 520 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 KLHL18O94889 574 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 BMP10O95393 424 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 SERPIND1P05546 499 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 SERPINA6P08185 405 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 GSTA1P08263 222 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 RPS17P08708 135 aaKnown RBP8.09□□□□□ -1.11
UBR1-204ENST00000563239 CD63P08962 238 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 SLC35G6P0C7Q6 338 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 ZNF888P0CJ79 500 aaPredicted RBP8.09□□□□□ -1.11
UBR1-204ENST00000563239 EPB42P16452 691 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 ALOX12P18054 663 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 CXCR2P25025 360 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 EEF1DP29692 281 aaKnown RBP8.09□□□□□ -1.11
UBR1-204ENST00000563239 HNRNPH1P31943 449 aaKnown RBP8.09□□□□□ -1.11
UBR1-204ENST00000563239 OTX2P32243 289 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms