RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 MVB12AQ96EY5 273 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 TSNARE1Q96NA8 513 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 MRPL57Q9BQC6 102 aaKnown RBP5.89□□□□□ -1.47
CNOT1-204ENST00000563130 SLC7A5P2Q9GIP4 190 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 SLC26A1Q9H2B4 701 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 TXLNGQ9NUQ3 528 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 DNAJC11Q9NVH1 559 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 GEMIN8Q9NWZ8 242 aaKnown RBP5.89□□□□□ -1.47
CNOT1-204ENST00000563130 XPR1Q9UBH6 696 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 TBK1Q9UHD2 729 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 ZFP69BQ9UJL9 534 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 MRPS18BQ9Y676 258 aaKnown RBP5.89□□□□□ -1.47
CNOT1-204ENST00000563130 MGAQ8IWI9 3026 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 IGLV3-12A0A075B6K2 115 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 A0A1W2PNR3 127 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 A0A1W2PPM1 405 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 SUPT3HB4E1H0 165 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 K7EPI3 171 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 NKX2-8O15522 239 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 FOXS1O43638 330 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 SUPT3HO75486 399 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 CREG1O75629 220 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 ALBP02768 609 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 S100BP04271 92 aaPredicted RBP5.88□□□□□ -1.47
CNOT1-204ENST00000563130 C1GALT1C1LP0DN25 315 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 CD22P20273 847 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 ALAS2P22557 587 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 AHRP35869 848 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 SLCO1A2P46721 670 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 NFKB2Q00653 900 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 PWP1Q13610 501 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 COL9A2Q14055 689 aaPredicted RBP5.88□□□□□ -1.47
CNOT1-204ENST00000563130 TBCCQ15814 346 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 PDK4Q16654 411 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 PFKFB4Q16877 469 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 NKAIN1Q4KMZ8 207 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 C1orf189Q5VU69 101 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 PRMT9Q6P2P2 845 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 COX15Q7KZN9 410 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 TMPRSS11BQ86T26 416 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 SYVN1Q86TM6 617 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 ENDOVQ8N8Q3 282 aaKnown RBP5.88□□□□□ -1.47
CNOT1-204ENST00000563130 OR2W6PQ8NHA6 318 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 ADAMTS17Q8TE56 1095 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 EXT2Q93063 718 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 FKBP10Q96AY3 582 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 C17orf62Q9BQA9 187 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 AIF1LQ9BQI0 150 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 TMEM109Q9BVC6 243 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 C1QTNF3Q9BXJ4 246 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 ROPN1BQ9BZX4 212 aaPredicted RBP5.88□□□□□ -1.47
CNOT1-204ENST00000563130 PITHD1Q9GZP4 211 aaPredicted RBP5.88□□□□□ -1.47
CNOT1-204ENST00000563130 MRPL46Q9H2W6 279 aaKnown RBP5.88□□□□□ -1.47
CNOT1-204ENST00000563130 ACTL8Q9H568 366 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 NT5DC2Q9H857 520 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 ROPN1Q9HAT0 212 aaPredicted RBP5.88□□□□□ -1.47
CNOT1-204ENST00000563130 IRAK4Q9NWZ3 460 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 TMEM216Q9P0N5 145 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 TCFL5Q9UL49 500 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 FARSAQ9Y285 508 aaKnown RBP5.88□□□□□ -1.47
CNOT1-204ENST00000563130 VSTM2BA6NLU5 285 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 ZNF891A8MT65 544 aaPredicted RBP5.88□□□□□ -1.47
CNOT1-204ENST00000563130 FOXO6A8MYZ6 492 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 STX16-NPEPL1H3BU86 382 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 E2F3O00716 465 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 STX16O14662 325 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 OR1F1O43749 312 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 CCNT2O60583 730 aaKnown RBP5.88□□□□□ -1.47
CNOT1-204ENST00000563130 TBX6O95947 436 aaPredicted RBP5.88□□□□□ -1.47
CNOT1-204ENST00000563130 GSTA1P08263 222 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 CD63P08962 238 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 CXCR2P25025 360 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 RPS15P62841 145 aaKnown RBP5.88□□□□□ -1.47
CNOT1-204ENST00000563130 MC1RQ01726 317 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 HYAL2Q12891 473 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 DOC2AQ14183 400 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 OVCH1Q7RTY7 1134 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 ASPGQ86U10 573 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 RIBC1Q8N443 379 aaPredicted RBP5.88□□□□□ -1.47
CNOT1-204ENST00000563130 AFAP1L2Q8N4X5 818 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 ZSCAN1Q8NBB4 408 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 KCT2Q8NC54 265 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 CAMKVQ8NCB2 501 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 NT5CQ8TCD5 201 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 CREB3L4Q8TEY5 395 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.88□□□□□ -1.47
CNOT1-204ENST00000563130 SLC13A3Q8WWT9 602 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 TTC9Q92623 222 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 MOCOSQ96EN8 888 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 PTCD3Q96EY7 689 aaKnown RBP5.88□□□□□ -1.47
CNOT1-204ENST00000563130 SEC16BQ96JE7 1060 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 MACROD1Q9BQ69 325 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 WDR54Q9H977 334 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 CPSF2Q9P2I0 782 aaKnown RBP5.88□□□□□ -1.47
CNOT1-204ENST00000563130 OPTCQ9UBM4 332 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 LGALS13Q9UHV8 139 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 ZNF490Q9ULM2 529 aaPredicted RBP5.88□□□□□ -1.47
CNOT1-204ENST00000563130 TMCO1Q9UM00 188 aa5.88□□□□□ -1.47
CNOT1-204ENST00000563130 MRPS2Q9Y399 296 aaKnown RBP5.88□□□□□ -1.47
CNOT1-204ENST00000563130 TNPO3Q9Y5L0 923 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms