RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 SHCBP1LQ9BZQ2 653 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 CUTCQ9NTM9 273 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 TSC22D4Q9Y3Q8 395 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 DCHS1Q96JQ0 3298 aa17.93■□□□□ 0.46
RAB40C-207ENST00000563109 STMND1H3BQB6 276 aa17.93■□□□□ 0.46
RAB40C-207ENST00000563109 UBFD1O14562 309 aaKnown RBP17.93■□□□□ 0.46
RAB40C-207ENST00000563109 ABCE1P61221 599 aaKnown RBP17.93■□□□□ 0.46
RAB40C-207ENST00000563109 ARL13AQ5H913 290 aaPredicted RBP17.93■□□□□ 0.46
RAB40C-207ENST00000563109 TOR1AIP1Q5JTV8 583 aa17.93■□□□□ 0.46
RAB40C-207ENST00000563109 PRAMEF17Q5VTA0 474 aa17.93■□□□□ 0.46
RAB40C-207ENST00000563109 OR6Y1Q8NGX8 325 aa17.93■□□□□ 0.46
RAB40C-207ENST00000563109 HUS1BQ8NHY5 278 aa17.93■□□□□ 0.46
RAB40C-207ENST00000563109 ZCCHC10Q8TBK6 192 aa17.93■□□□□ 0.46
RAB40C-207ENST00000563109 CREB3L4Q8TEY5 395 aa17.93■□□□□ 0.46
RAB40C-207ENST00000563109 CENPKQ9BS16 269 aa17.93■□□□□ 0.46
RAB40C-207ENST00000563109 NDOR1Q9UHB4 597 aa17.93■□□□□ 0.46
RAB40C-207ENST00000563109 ZNF225Q9UK10 706 aa17.93■□□□□ 0.46
RAB40C-207ENST00000563109 DSCR3O14972 297 aa17.92■□□□□ 0.46
RAB40C-207ENST00000563109 CHEK2O96017 543 aa17.92■□□□□ 0.46
RAB40C-207ENST00000563109 NTRK1P04629 796 aa17.92■□□□□ 0.46
RAB40C-207ENST00000563109 CHRNGP07510 517 aa17.92■□□□□ 0.46
RAB40C-207ENST00000563109 ZNF28P17035 718 aa17.92■□□□□ 0.46
RAB40C-207ENST00000563109 SLC1A6P48664 564 aa17.92■□□□□ 0.46
RAB40C-207ENST00000563109 SKP1P63208 163 aa17.92■□□□□ 0.46
RAB40C-207ENST00000563109 TGM3Q08188 693 aa17.92■□□□□ 0.46
RAB40C-207ENST00000563109 TBC1D25Q3MII6 688 aa17.92■□□□□ 0.46
RAB40C-207ENST00000563109 SGO1Q5FBB7 561 aa17.92■□□□□ 0.46
RAB40C-207ENST00000563109 ADNP2Q6IQ32 1131 aa17.92■□□□□ 0.46
RAB40C-207ENST00000563109 RHBDD2Q6NTF9 364 aa17.92■□□□□ 0.46
RAB40C-207ENST00000563109 TTLL10Q6ZVT0 673 aa17.92■□□□□ 0.46
RAB40C-207ENST00000563109 ABHD13Q7L211 337 aa17.92■□□□□ 0.46
RAB40C-207ENST00000563109 KIRREL3Q8IZU9 778 aa17.92■□□□□ 0.46
RAB40C-207ENST00000563109 WDR20Q8TBZ3 569 aa17.92■□□□□ 0.46
RAB40C-207ENST00000563109 PROKR1Q8TCW9 393 aa17.92■□□□□ 0.46
RAB40C-207ENST00000563109 ZNF473Q8WTR7 871 aaKnown RBP17.92■□□□□ 0.46
RAB40C-207ENST00000563109 SELENOMQ8WWX9 145 aa17.92■□□□□ 0.46
RAB40C-207ENST00000563109 RNF31Q96EP0 1072 aa17.92■□□□□ 0.46
RAB40C-207ENST00000563109 CMTM7Q96FZ5 175 aa17.92■□□□□ 0.46
RAB40C-207ENST00000563109 MTERF1Q99551 399 aaKnown RBP17.92■□□□□ 0.46
RAB40C-207ENST00000563109 MACROD1Q9BQ69 325 aa17.92■□□□□ 0.46
RAB40C-207ENST00000563109 SLC6A16Q9GZN6 736 aa17.92■□□□□ 0.46
RAB40C-207ENST00000563109 DMRT3Q9NQL9 472 aa17.92■□□□□ 0.46
RAB40C-207ENST00000563109 TMEM184BQ9Y519 407 aaPredicted RBP17.92■□□□□ 0.46
RAB40C-207ENST00000563109 SPEGQ15772 3267 aa17.92■□□□□ 0.46
RAB40C-207ENST00000563109 A0A1B0GX78 115 aa17.91■□□□□ 0.46
RAB40C-207ENST00000563109 FOXE1O00358 373 aaPredicted RBP17.91■□□□□ 0.46
RAB40C-207ENST00000563109 MANBAO00462 879 aa17.91■□□□□ 0.46
RAB40C-207ENST00000563109 AZIN1O14977 448 aa17.91■□□□□ 0.46
RAB40C-207ENST00000563109 KLK3P07288 261 aaPredicted RBP17.91■□□□□ 0.46
RAB40C-207ENST00000563109 UROSP10746 265 aa17.91■□□□□ 0.46
RAB40C-207ENST00000563109 ALAS2P22557 587 aa17.91■□□□□ 0.46
RAB40C-207ENST00000563109 ATP1A2P50993 1020 aa17.91■□□□□ 0.46
RAB40C-207ENST00000563109 BST1Q10588 318 aa17.91■□□□□ 0.46
RAB40C-207ENST00000563109 MAP7Q14244 749 aa17.91■□□□□ 0.46
RAB40C-207ENST00000563109 SH2D4BQ5SQS7 431 aa17.91■□□□□ 0.46
RAB40C-207ENST00000563109 TMEM214Q6NUQ4 689 aaKnown RBP17.91■□□□□ 0.46
RAB40C-207ENST00000563109 C6orf15Q6UXA7 325 aaPredicted RBP17.91■□□□□ 0.46
RAB40C-207ENST00000563109 CHSY3Q70JA7 882 aa17.91■□□□□ 0.46
RAB40C-207ENST00000563109 VN1R5Q7Z5H4 357 aa17.91■□□□□ 0.46
RAB40C-207ENST00000563109 AFAP1L2Q8N4X5 818 aa17.91■□□□□ 0.46
RAB40C-207ENST00000563109 KCT2Q8NC54 265 aa17.91■□□□□ 0.46
RAB40C-207ENST00000563109 GALNT6Q8NCL4 622 aa17.91■□□□□ 0.46
RAB40C-207ENST00000563109 LRRC8CQ8TDW0 803 aa17.91■□□□□ 0.46
RAB40C-207ENST00000563109 GAL3ST3Q96A11 431 aa17.91■□□□□ 0.46
RAB40C-207ENST00000563109 MVB12AQ96EY5 273 aa17.91■□□□□ 0.46
RAB40C-207ENST00000563109 C10orf90Q96M02 699 aa17.91■□□□□ 0.46
RAB40C-207ENST00000563109 LRFN5Q96NI6 719 aa17.91■□□□□ 0.46
RAB40C-207ENST00000563109 KCNA7Q96RP8 456 aa17.91■□□□□ 0.46
RAB40C-207ENST00000563109 MS4A8Q9BY19 250 aa17.91■□□□□ 0.46
RAB40C-207ENST00000563109 MANSC1Q9H8J5 431 aa17.91■□□□□ 0.46
RAB40C-207ENST00000563109 ANKHQ9HCJ1 492 aa17.91■□□□□ 0.46
RAB40C-207ENST00000563109 DHCR7Q9UBM7 475 aaKnown RBP17.91■□□□□ 0.46
RAB40C-207ENST00000563109 ACSL6Q9UKU0 697 aa17.91■□□□□ 0.46
RAB40C-207ENST00000563109 CDC14AQ9UNH5 594 aa17.91■□□□□ 0.46
RAB40C-207ENST00000563109 FIS1Q9Y3D6 152 aa17.91■□□□□ 0.46
RAB40C-207ENST00000563109 A0A088AWK7 358 aa17.9■□□□□ 0.46
RAB40C-207ENST00000563109 MAGEB17A8MXT2 336 aa17.9■□□□□ 0.46
RAB40C-207ENST00000563109 ULK1O75385 1050 aa17.9■□□□□ 0.46
RAB40C-207ENST00000563109 LYPLA1O75608 230 aaPredicted RBP17.9■□□□□ 0.46
RAB40C-207ENST00000563109 DLGAP3O95886 979 aa17.9■□□□□ 0.46
RAB40C-207ENST00000563109 CCNYL3P0C7X3 344 aa17.9■□□□□ 0.46
RAB40C-207ENST00000563109 ZNF10P21506 573 aaPredicted RBP17.9■□□□□ 0.46
RAB40C-207ENST00000563109 AGXTP21549 392 aa17.9■□□□□ 0.46
RAB40C-207ENST00000563109 GCGRP47871 477 aa17.9■□□□□ 0.46
RAB40C-207ENST00000563109 AVPR1BP47901 424 aa17.9■□□□□ 0.46
RAB40C-207ENST00000563109 RAP1GDS1P52306 607 aa17.9■□□□□ 0.46
RAB40C-207ENST00000563109 RPS13P62277 151 aaKnown RBP17.9■□□□□ 0.46
RAB40C-207ENST00000563109 ZNF33BQ06732 778 aa17.9■□□□□ 0.46
RAB40C-207ENST00000563109 FAM53BQ14153 422 aa17.9■□□□□ 0.46
RAB40C-207ENST00000563109 HERC3Q15034 1050 aa17.9■□□□□ 0.46
RAB40C-207ENST00000563109 TMEM35AQ53FP2 167 aa17.9■□□□□ 0.46
RAB40C-207ENST00000563109 C1orf189Q5VU69 101 aa17.9■□□□□ 0.46
RAB40C-207ENST00000563109 NIPAL1Q6NVV3 410 aa17.9■□□□□ 0.46
RAB40C-207ENST00000563109 PRMT9Q6P2P2 845 aa17.9■□□□□ 0.46
RAB40C-207ENST00000563109 TRIM40Q6P9F5 258 aa17.9■□□□□ 0.46
RAB40C-207ENST00000563109 NLGN4XQ8N0W4 816 aa17.9■□□□□ 0.46
RAB40C-207ENST00000563109 ESX1Q8N693 406 aa17.9■□□□□ 0.46
RAB40C-207ENST00000563109 SRFBP1Q8NEF9 429 aaKnown RBP17.9■□□□□ 0.46
RAB40C-207ENST00000563109 NLGN4YQ8NFZ3 816 aaPredicted RBP17.9■□□□□ 0.46
RAB40C-207ENST00000563109 MTFMTQ96DP5 389 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms