RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 CYP4X1Q8N118 509 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 TBC1D19Q8N5T2 526 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 MFSD9Q8NBP5 474 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.22□□□□□ -0.45
SF3B3-202ENST00000562722 MCUQ8NE86 351 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 TRIM58Q8NG06 486 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 OR5T3Q8NGG3 340 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 THAP3Q8WTV1 239 aaPredicted RBP12.22□□□□□ -0.45
SF3B3-202ENST00000562722 EEF1AKMT1Q8WVE0 214 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 MAGOHBQ96A72 148 aaKnown RBP12.22□□□□□ -0.45
SF3B3-202ENST00000562722 SCMH1Q96GD3 660 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 HIST1H2AHQ96KK5 128 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 OR1F2PQ96R84 312 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 HIST1H2AJQ99878 128 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 AARSD1Q9BTE6 412 aaKnown RBP12.22□□□□□ -0.45
SF3B3-202ENST00000562722 H2AFJQ9BTM1 129 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 FAM129AQ9BZQ8 928 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 CDCP1Q9H5V8 836 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 PARVBQ9HBI1 364 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 GPAMQ9HCL2 828 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 LRFN1Q9P244 771 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 PDE10AQ9Y233 779 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 MAGEB17A8MXT2 336 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 OR1F1O43749 312 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 LCMT2O60294 686 aaKnown RBP12.21□□□□□ -0.45
SF3B3-202ENST00000562722 CLDN14O95500 239 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 FHP07954 510 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 SP1P08047 785 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 ZNF24P17028 368 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 AGAP20933 346 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 IL10P22301 178 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 JAK1P23458 1154 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 CCR8P51685 355 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 SLC26A5P58743 744 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 SKP1P63208 163 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 OLR1P78380 273 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 MEF2AQ02078 507 aaPredicted RBP12.21□□□□□ -0.45
SF3B3-202ENST00000562722 RHAGQ02094 409 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 SP140Q13342 867 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 DEFB134Q4QY38 66 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 SLC25A25Q6KCM7 469 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 TTC27Q6P3X3 843 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 LCTLQ6UWM7 567 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 PCGF5Q86SE9 256 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 GHDCQ8N2G8 530 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 GABPB2Q8TAK5 448 aaPredicted RBP12.21□□□□□ -0.45
SF3B3-202ENST00000562722 TBC1D20Q96BZ9 403 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 MTFMTQ96DP5 389 aaKnown RBP12.21□□□□□ -0.45
SF3B3-202ENST00000562722 TM4SF19Q96DZ7 209 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 LINGO1Q96FE5 620 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 FRMD6Q96NE9 622 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 NPAS2Q99743 824 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 HAUS8Q9BT25 410 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 TRIM8Q9BZR9 551 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 TAS2R13Q9NYV9 303 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 MEMO1Q9Y316 297 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 SLC22A7Q9Y694 548 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 HEATR5BQ9P2D3 2071 aa12.21□□□□□ -0.45
SF3B3-202ENST00000562722 ASPDHA6ND91 283 aa12.2□□□□□ -0.46
SF3B3-202ENST00000562722 ZNHIT1O43257 154 aa12.2□□□□□ -0.46
SF3B3-202ENST00000562722 ASNA1O43681 348 aa12.2□□□□□ -0.46
SF3B3-202ENST00000562722 B4GALT2O60909 372 aa12.2□□□□□ -0.46
SF3B3-202ENST00000562722 SLC25A12O75746 678 aa12.2□□□□□ -0.46
SF3B3-202ENST00000562722 HSF1Q00613 529 aa12.2□□□□□ -0.46
SF3B3-202ENST00000562722 RGS1Q08116 209 aa12.2□□□□□ -0.46
SF3B3-202ENST00000562722 DHX9Q08211 1270 aaKnown RBP12.2□□□□□ -0.46
SF3B3-202ENST00000562722 RPS19BP1Q86WX3 136 aaKnown RBP12.2□□□□□ -0.46
SF3B3-202ENST00000562722 CEP97Q8IW35 865 aa12.2□□□□□ -0.46
SF3B3-202ENST00000562722 KIF2BQ8N4N8 673 aa12.2□□□□□ -0.46
SF3B3-202ENST00000562722 ZNF740Q8NDX6 193 aa12.2□□□□□ -0.46
SF3B3-202ENST00000562722 PLPP5Q8NEB5 264 aa12.2□□□□□ -0.46
SF3B3-202ENST00000562722 ADAMTS18Q8TE60 1221 aa12.2□□□□□ -0.46
SF3B3-202ENST00000562722 AGAP11Q8TF27 550 aa12.2□□□□□ -0.46
SF3B3-202ENST00000562722 TMEM125Q96AQ2 219 aa12.2□□□□□ -0.46
SF3B3-202ENST00000562722 PYCR2Q96C36 320 aa12.2□□□□□ -0.46
SF3B3-202ENST00000562722 SGPP1Q9BX95 441 aa12.2□□□□□ -0.46
SF3B3-202ENST00000562722 LANCL2Q9NS86 450 aa12.2□□□□□ -0.46
SF3B3-202ENST00000562722 ARL15Q9NXU5 204 aa12.2□□□□□ -0.46
SF3B3-202ENST00000562722 ZNF835Q9Y2P0 537 aa12.2□□□□□ -0.46
SF3B3-202ENST00000562722 C19orf84I3L1E1 186 aa12.19□□□□□ -0.46
SF3B3-202ENST00000562722 PSMD12O00232 456 aaPredicted RBP12.19□□□□□ -0.46
SF3B3-202ENST00000562722 PRRG2O14669 202 aa12.19□□□□□ -0.46
SF3B3-202ENST00000562722 SLC16A5O15375 505 aa12.19□□□□□ -0.46
SF3B3-202ENST00000562722 CHST10O43529 356 aa12.19□□□□□ -0.46
SF3B3-202ENST00000562722 GALR3O60755 368 aaPredicted RBP12.19□□□□□ -0.46
SF3B3-202ENST00000562722 NEURL1O76050 574 aa12.19□□□□□ -0.46
SF3B3-202ENST00000562722 TSPAN12O95859 305 aa12.19□□□□□ -0.46
SF3B3-202ENST00000562722 NPPBP16860 134 aa12.19□□□□□ -0.46
SF3B3-202ENST00000562722 ALOX12P18054 663 aa12.19□□□□□ -0.46
SF3B3-202ENST00000562722 PGAM1P18669 254 aa12.19□□□□□ -0.46
SF3B3-202ENST00000562722 TPP2P29144 1249 aaPredicted RBP12.19□□□□□ -0.46
SF3B3-202ENST00000562722 SSTR2P30874 369 aa12.19□□□□□ -0.46
SF3B3-202ENST00000562722 HNF4AP41235 474 aa12.19□□□□□ -0.46
SF3B3-202ENST00000562722 CYB561P49447 251 aa12.19□□□□□ -0.46
SF3B3-202ENST00000562722 PWP1Q13610 501 aa12.19□□□□□ -0.46
SF3B3-202ENST00000562722 CDSNQ15517 529 aa12.19□□□□□ -0.46
SF3B3-202ENST00000562722 PHKG1Q16816 387 aa12.19□□□□□ -0.46
SF3B3-202ENST00000562722 CCDC137Q6PK04 289 aaKnown RBP12.19□□□□□ -0.46
SF3B3-202ENST00000562722 PAQR3Q6TCH7 311 aa12.19□□□□□ -0.46
SF3B3-202ENST00000562722 C3P1Q6ZMU1 363 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms