RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 PEBP1P30086 187 aaKnown RBP6.27□□□□□ -1.41
CAPN3-210ENST00000561817 AKT2P31751 481 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 MSX2P35548 267 aaPredicted RBP6.27□□□□□ -1.41
CAPN3-210ENST00000561817 SLC7A2P52569 658 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 WNT3P56703 355 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 KCNK10P57789 538 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 RPS13P62277 151 aaKnown RBP6.27□□□□□ -1.41
CAPN3-210ENST00000561817 REEP5Q00765 189 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 TRAP1Q12931 704 aaKnown RBP6.27□□□□□ -1.41
CAPN3-210ENST00000561817 MTAPQ13126 283 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 EIF2B5Q13144 721 aaKnown RBP6.27□□□□□ -1.41
CAPN3-210ENST00000561817 PWP1Q13610 501 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 TRIM25Q14258 630 aaKnown RBP6.27□□□□□ -1.41
CAPN3-210ENST00000561817 LRRC32Q14392 662 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 CAPRIN1Q14444 709 aaKnown RBP6.27□□□□□ -1.41
CAPN3-210ENST00000561817 SLBPQ14493 270 aaKnown RBP eCLIP6.27□□□□□ -1.41
CAPN3-210ENST00000561817 IMPG1Q17R60 797 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 MMEL1Q495T6 779 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 SPATS1Q496A3 300 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 TIGD2Q4W5G0 525 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 SPANXN4Q5MJ08 99 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 SAMD4BQ5PRF9 694 aaKnown RBP6.27□□□□□ -1.41
CAPN3-210ENST00000561817 PERM1Q5SV97 790 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 PRAMEF14Q5SWL7 426 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 ZNF468Q5VIY5 522 aaPredicted RBP6.27□□□□□ -1.41
CAPN3-210ENST00000561817 PRAMEF13Q5VWM6 474 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 NOXRED1Q6NXP6 359 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 MED27Q6P2C8 311 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 PRMT9Q6P2P2 845 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 SLC2A7Q6PXP3 512 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 ENPP7Q6UWV6 458 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 LAYNQ6UX15 382 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 PRR23BQ6ZRT6 265 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 TMPRSS11BQ86T26 416 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 SLC22A18ASQ8N1D0 253 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 RNF148Q8N7C7 305 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 NKAIN3Q8N8D7 197 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 FAM156AQ8NDB6 213 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 OR13H1Q8NG92 308 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 OR2L8Q8NGY9 312 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 CCL4L1Q8NHW4 92 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 SMPDL3AQ92484 453 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 JADE3Q92613 823 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 GTF2H4Q92759 462 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 TSACCQ96A04 125 aaPredicted RBP6.27□□□□□ -1.41
CAPN3-210ENST00000561817 CLDN23Q96B33 292 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 TESCQ96BS2 214 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 BIRC7Q96CA5 298 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 CCDC124Q96CT7 223 aaKnown RBP6.27□□□□□ -1.41
CAPN3-210ENST00000561817 ASB9Q96DX5 294 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 DUS3LQ96G46 650 aaKnown RBP6.27□□□□□ -1.41
CAPN3-210ENST00000561817 TOE1Q96GM8 510 aaKnown RBP6.27□□□□□ -1.41
CAPN3-210ENST00000561817 SHDQ96IW2 340 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 EGLN2Q96KS0 407 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 APOLD1Q96LR9 279 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 C12orf66Q96MD2 445 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 MTERF1Q99551 399 aaKnown RBP6.27□□□□□ -1.41
CAPN3-210ENST00000561817 SERPINI1Q99574 410 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 SMAD5Q99717 465 aaKnown RBP6.27□□□□□ -1.41
CAPN3-210ENST00000561817 HAUS8Q9BT25 410 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 ZNF717Q9BY31 904 aaPredicted RBP6.27□□□□□ -1.41
CAPN3-210ENST00000561817 KIR3DX1Q9H7L2 352 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 MVB12BQ9H7P6 319 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 NT5DC2Q9H857 520 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 CARS2Q9HA77 564 aaKnown RBP6.27□□□□□ -1.41
CAPN3-210ENST00000561817 SPAG4Q9NPE6 437 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 DMRT3Q9NQL9 472 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 PRDM8Q9NQV8 689 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 ZNF624Q9P2J8 865 aaPredicted RBP6.27□□□□□ -1.41
CAPN3-210ENST00000561817 VPS29Q9UBQ0 182 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 TBC1D29Q9UFV1 150 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 ERVK-11Q9UQG0 969 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 DMTF1Q9Y222 760 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 MAN2B2Q9Y2E5 1009 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 TDRKHQ9Y2W6 561 aaKnown RBP6.27□□□□□ -1.41
CAPN3-210ENST00000561817 DGKBQ9Y6T7 804 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 TP53BP1Q12888 1972 aaPredicted RBP6.27□□□□□ -1.41
CAPN3-210ENST00000561817 HEATR5BQ9P2D3 2071 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 PRSS51A0A1B0GVH4 220 aa6.26□□□□□ -1.41
CAPN3-210ENST00000561817 A0A1W2PR77 199 aa6.26□□□□□ -1.41
CAPN3-210ENST00000561817 TCRBV3S1A0A5B6 114 aa6.26□□□□□ -1.41
CAPN3-210ENST00000561817 FAM170BA6NMN3 283 aa6.26□□□□□ -1.41
CAPN3-210ENST00000561817 OR52A4PA6NMU1 304 aa6.26□□□□□ -1.41
CAPN3-210ENST00000561817 H0Y3Z8 333 aa6.26□□□□□ -1.41
CAPN3-210ENST00000561817 PRAMEF26H0Y7S4 382 aa6.26□□□□□ -1.41
CAPN3-210ENST00000561817 EIF1AYO14602 144 aaKnown RBP6.26□□□□□ -1.41
CAPN3-210ENST00000561817 SCAMP1O15126 338 aa6.26□□□□□ -1.41
CAPN3-210ENST00000561817 YY2O15391 372 aa6.26□□□□□ -1.41
CAPN3-210ENST00000561817 B3GALT4O96024 378 aa6.26□□□□□ -1.41
CAPN3-210ENST00000561817 IL6P05231 212 aa6.26□□□□□ -1.41
CAPN3-210ENST00000561817 PGRP06401 933 aa6.26□□□□□ -1.41
CAPN3-210ENST00000561817 C8BP07358 591 aa6.26□□□□□ -1.41
CAPN3-210ENST00000561817 AK4P27144 223 aaPredicted RBP6.26□□□□□ -1.41
CAPN3-210ENST00000561817 PSMB5P28074 263 aa6.26□□□□□ -1.41
CAPN3-210ENST00000561817 CD6P30203 668 aa6.26□□□□□ -1.41
CAPN3-210ENST00000561817 OXTRP30559 389 aa6.26□□□□□ -1.41
CAPN3-210ENST00000561817 NUDT1P36639 197 aa6.26□□□□□ -1.41
CAPN3-210ENST00000561817 PIK3CBP42338 1070 aa6.26□□□□□ -1.41
CAPN3-210ENST00000561817 RABIFP47224 123 aa6.26□□□□□ -1.41
CAPN3-210ENST00000561817 GSK3BP49841 420 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms