RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 KIR2DS5A0A0G2JLQ3 304 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 A0A0G2JNG1 304 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 KIR2DS3K7RE56 304 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 BTN3A3O00478 584 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 PLPP1O14494 284 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 RFXANKO14593 260 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 ARPC2O15144 300 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 B3GALT4O96024 378 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 TPP2P29144 1249 aaPredicted RBP12.14□□□□□ -0.47
USP3-213ENST00000559711 SLC7A1P30825 629 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 BSGP35613 385 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 GRK3P35626 688 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 RPL3P39023 403 aaKnown RBP12.14□□□□□ -0.47
USP3-213ENST00000559711 UBE2IP63279 158 aaKnown RBP12.14□□□□□ -0.47
USP3-213ENST00000559711 CYP4F3Q08477 520 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 PDE7AQ13946 482 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 KIR2DS3Q14952 304 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 KIR2DS5Q14953 304 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 ZIC1Q15915 447 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 GTDC1Q4AE62 458 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 AASDHQ4L235 1098 aaPredicted RBP12.14□□□□□ -0.47
USP3-213ENST00000559711 ANXA8L1Q5VT79 327 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 ZNF425Q6IV72 752 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 IKBIPQ70UQ0 350 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 R3HCC1LQ7Z5L2 792 aaKnown RBP12.14□□□□□ -0.47
USP3-213ENST00000559711 ADCK2Q7Z695 626 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 IQCHQ86VS3 1027 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 IFNEQ86WN2 208 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 PROSER1Q86XN7 944 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 TMEM126BQ8IUX1 230 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 TMEM132CQ8N3T6 1108 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 CDC26Q8NHZ8 85 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 JPH3Q8WXH2 748 aaPredicted RBP12.14□□□□□ -0.47
USP3-213ENST00000559711 NELL1Q92832 810 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 MIEF2Q96C03 454 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 MTERF3Q96E29 417 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 CCDC115Q96NT0 180 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 GBP5Q96PP8 586 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 F2RL3Q96RI0 385 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 ECSITQ9BQ95 431 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 DPH7Q9BTV6 452 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 DUSP26Q9BV47 211 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 IKZF5Q9H5V7 419 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 KAT8Q9H7Z6 458 aaKnown RBP12.14□□□□□ -0.47
USP3-213ENST00000559711 CAAP1Q9H8G2 361 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 POT1Q9NUX5 634 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 BTNL2Q9UIR0 455 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 SNX7Q9UNH6 387 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 AP4S1Q9Y587 144 aa12.14□□□□□ -0.47
USP3-213ENST00000559711 ISM1B1AKI9 464 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 NVLO15381 856 aaKnown RBP12.13□□□□□ -0.47
USP3-213ENST00000559711 YY2O15391 372 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 GBAP04062 536 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 WNT1P04628 370 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 FURINP09958 794 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 CTSEP14091 401 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 CD38P28907 300 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 AHRP35869 848 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 BCL6P41182 706 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 GRIA3P42263 894 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 CDKN2CP42773 168 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 OR4D2P58180 307 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 RACK1P63244 317 aaKnown RBP12.13□□□□□ -0.47
USP3-213ENST00000559711 CYP4F2P78329 520 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 LRRC74AQ0VAA2 488 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 ZNF542PQ5EBM4 170 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 PRRT3Q5FWE3 981 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 KIAA1614Q5VZ46 1190 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 PAGE2Q7Z2X7 111 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 TAF8Q7Z7C8 310 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 ANKRD46Q86W74 232 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 SPPL2CQ8IUH8 684 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 PLD3Q8IV08 490 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 FAM20CQ8IXL6 584 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 VPS37AQ8NEZ2 397 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 FLVCR1-AS1Q8TAF5 88 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 SLCO4A1Q96BD0 722 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 QRFPRQ96P65 431 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 PHF12Q96QT6 1004 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 CPPED1Q9BRF8 314 aaPredicted RBP12.13□□□□□ -0.47
USP3-213ENST00000559711 THUMPD3Q9BV44 507 aaKnown RBP12.13□□□□□ -0.47
USP3-213ENST00000559711 BHLHE41Q9C0J9 482 aaPredicted RBP12.13□□□□□ -0.47
USP3-213ENST00000559711 CCM2LQ9NUG4 571 aaPredicted RBP12.13□□□□□ -0.47
USP3-213ENST00000559711 CPNE7Q9UBL6 633 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 ADAM29Q9UKF5 820 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 ERVK-11Q9UQG0 969 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 GMEB1Q9Y692 573 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 AP1M2Q9Y6Q5 423 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 FAM221BA6H8Z2 402 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 LRIT2A6NDA9 550 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 STK25O00506 426 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 HAT1O14929 419 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 CAPN5O15484 640 aaPredicted RBP12.13□□□□□ -0.47
USP3-213ENST00000559711 VIPP01282 170 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 CAPNS1P04632 268 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 CELA2BP08218 269 aaPredicted RBP12.13□□□□□ -0.47
USP3-213ENST00000559711 CXCL12P48061 93 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 GZMMP51124 257 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 TAS2R50P59544 299 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 C2orf80Q0P641 193 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms