RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 TRIM55Q9BYV6 548 aa17.75■□□□□ 0.43
CASC4-209ENST00000559222 SLC6A16Q9GZN6 736 aa17.75■□□□□ 0.43
CASC4-209ENST00000559222 MRPL46Q9H2W6 279 aaKnown RBP17.75■□□□□ 0.43
CASC4-209ENST00000559222 HCN3Q9P1Z3 774 aa17.75■□□□□ 0.43
CASC4-209ENST00000559222 TNRC6AQ8NDV7 1962 aaKnown RBP17.74■□□□□ 0.43
CASC4-209ENST00000559222 TLDC2A0PJX2 215 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 CCDC189A1A4V9 331 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 VSTM2BA6NLU5 285 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 A8MT66 165 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 ERVH48-1M5A8F1 160 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 E2F3O00716 465 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 TXNDC9O14530 226 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 RDH16O75452 317 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 JRKO75564 520 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 DNAJB5O75953 348 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 PRB1P04280 392 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 SLC35G6P0C7Q6 338 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 HNRNPH1P31943 449 aaKnown RBP17.74■□□□□ 0.43
CASC4-209ENST00000559222 AHRP35869 848 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 OLR1P78380 273 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 IRF8Q02556 426 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 E2F2Q14209 437 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 PCBP2Q15366 365 aaKnown RBP eCLIP17.74■□□□□ 0.43
CASC4-209ENST00000559222 TOR1AIP1Q5JTV8 583 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 TMIGD1Q6UXZ0 262 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 PPP1R32Q7Z5V6 425 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 LAPTM4BQ86VI4 370 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 ZC3H7AQ8IWR0 971 aaKnown RBP17.74■□□□□ 0.43
CASC4-209ENST00000559222 AMER2Q8N7J2 671 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 OR5T3Q8NGG3 340 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 STT3BQ8TCJ2 826 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 PTCD3Q96EY7 689 aaKnown RBP17.74■□□□□ 0.43
CASC4-209ENST00000559222 UBL7Q96S82 380 aaPredicted RBP17.74■□□□□ 0.43
CASC4-209ENST00000559222 MRPL57Q9BQC6 102 aaKnown RBP17.74■□□□□ 0.43
CASC4-209ENST00000559222 SLC26A1Q9H2B4 701 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 COPG2Q9UBF2 871 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 TRPC4Q9UBN4 977 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 POLHQ9Y253 713 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 NAALAD2Q9Y3Q0 740 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 KCNMB2Q9Y691 235 aa17.74■□□□□ 0.43
CASC4-209ENST00000559222 A0A0G2JN53 185 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 A0A1B0GTL3 188 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 ARGFXA6NJG6 315 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 OR7A17O14581 309 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 ATXN7O15265 892 aaPredicted RBP17.73■□□□□ 0.43
CASC4-209ENST00000559222 ALOX12BO75342 701 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 WFS1O76024 890 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 KLHL18O94889 574 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 ITGB2P05107 769 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 RAB8AP61006 207 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 KLC1Q07866 573 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 GTF2H2Q13888 395 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 FAM53BQ14153 422 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 NDUFA9Q16795 377 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 GTF2H2CQ6P1K8 395 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 BORAQ6PGQ7 559 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 MRGPREQ86SM8 312 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 C4orf33Q8N1A6 199 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 AFAP1L2Q8N4X5 818 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 ACMSDQ8TDX5 336 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 UTP15Q8TED0 518 aaKnown RBP17.73■□□□□ 0.43
CASC4-209ENST00000559222 MVB12AQ96EY5 273 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 C17orf62Q9BQA9 187 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 YIPF2Q9BWQ6 316 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 RBCK1Q9BYM8 510 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 EHD1Q9H4M9 534 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 ZBTB26Q9HCK0 441 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 RRAGDQ9NQL2 400 aaPredicted RBP17.73■□□□□ 0.43
CASC4-209ENST00000559222 PCTPQ9UKL6 214 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 PLAAQ9Y263 795 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 MAN2B2Q9Y2E5 1009 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 PADI2Q9Y2J8 665 aa17.73■□□□□ 0.43
CASC4-209ENST00000559222 IGLV3-12A0A075B6K2 115 aa17.72■□□□□ 0.43
CASC4-209ENST00000559222 OR2W5A6NFC9 320 aa17.72■□□□□ 0.43
CASC4-209ENST00000559222 PPP6CO00743 305 aa17.72■□□□□ 0.43
CASC4-209ENST00000559222 DLX3O60479 287 aa17.72■□□□□ 0.43
CASC4-209ENST00000559222 H2AFYO75367 372 aaKnown RBP17.72■□□□□ 0.43
CASC4-209ENST00000559222 NSA2O95478 260 aaKnown RBP17.72■□□□□ 0.43
CASC4-209ENST00000559222 ALBP02768 609 aa17.72■□□□□ 0.43
CASC4-209ENST00000559222 RPS17P08708 135 aaKnown RBP17.72■□□□□ 0.43
CASC4-209ENST00000559222 ZGLP1P0C6A0 271 aa17.72■□□□□ 0.43
CASC4-209ENST00000559222 EPB42P16452 691 aa17.72■□□□□ 0.43
CASC4-209ENST00000559222 KRT15P19012 456 aa17.72■□□□□ 0.43
CASC4-209ENST00000559222 TSPAN8P19075 237 aa17.72■□□□□ 0.43
CASC4-209ENST00000559222 POLE2P56282 527 aa17.72■□□□□ 0.43
CASC4-209ENST00000559222 PWP1Q13610 501 aa17.72■□□□□ 0.43
CASC4-209ENST00000559222 DEFB134Q4QY38 66 aa17.72■□□□□ 0.43
CASC4-209ENST00000559222 MREGQ8N565 214 aa17.72■□□□□ 0.43
CASC4-209ENST00000559222 TBC1D19Q8N5T2 526 aa17.72■□□□□ 0.43
CASC4-209ENST00000559222 OR52B6Q8NGF0 335 aa17.72■□□□□ 0.43
CASC4-209ENST00000559222 CCT6BQ92526 530 aa17.72■□□□□ 0.43
CASC4-209ENST00000559222 CDK15Q96Q40 435 aa17.72■□□□□ 0.43
CASC4-209ENST00000559222 CAPS2Q9BXY5 557 aa17.72■□□□□ 0.43
CASC4-209ENST00000559222 NT5DC2Q9H857 520 aa17.72■□□□□ 0.43
CASC4-209ENST00000559222 WDR54Q9H977 334 aa17.72■□□□□ 0.43
CASC4-209ENST00000559222 ZNF282Q9UDV7 671 aaPredicted RBP17.72■□□□□ 0.43
CASC4-209ENST00000559222 STX16-NPEPL1H3BU86 382 aa17.71■□□□□ 0.43
CASC4-209ENST00000559222 SOCS6O14544 535 aa17.71■□□□□ 0.43
CASC4-209ENST00000559222 STX16O14662 325 aa17.71■□□□□ 0.43
CASC4-209ENST00000559222 GALR3O60755 368 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms